This allows the generated files to maintain the same folder structure as
how they exist in the source folder.
Resolves the issue that a file in a different folder could potentially
conflict with another in a different folder but have the same name.
This is an easier mental model when pulling unit tests in to a
disassembler for verifying codegen.
This will allow us to add unit tests that have known failures like
unsupported features
Additionally if the test passes and is on the known failure list then it
still fails since its state has changed
