mirror of
https://github.com/Mintplex-Labs/langchain-python.git
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ac1320aae8
With the current method used to get the SQL table info, sqlite internal
schema tables are being included and are not being handled correctly by
sqlalchemy because the columns have no types. This is easy to see with
the Chinook database:
```python
db = SQLDatabase.from_uri("sqlite:///Chinook.db")
print(db.table_info)
```
```python
...
sqlalchemy.exc.CompileError: (in table 'sqlite_sequence', column 'name'): Can't generate DDL for NullType(); did you forget to specify a type on this Column?
```
SQLAlchemy 2.0 [ignores these by
default](https://github.com/sqlalchemy/sqlalchemy/blob/63d90b0f44016b15bed6c4108d90a71c15f05a09/lib/sqlalchemy/dialects/sqlite/base.py#L856-L880):
https://github.com/sqlalchemy/sqlalchemy/blob/63d90b0f44016b15bed6c4108d90a71c15f05a09/lib/sqlalchemy/dialects/sqlite/base.py#L2096-L2123
170 lines
6.4 KiB
Python
170 lines
6.4 KiB
Python
"""SQLAlchemy wrapper around a database."""
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from __future__ import annotations
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from typing import Any, Iterable, List, Optional
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from sqlalchemy import MetaData, create_engine, inspect, select
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from sqlalchemy.engine import Engine
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from sqlalchemy.exc import ProgrammingError
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from sqlalchemy.schema import CreateTable
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class SQLDatabase:
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"""SQLAlchemy wrapper around a database."""
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def __init__(
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self,
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engine: Engine,
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schema: Optional[str] = None,
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metadata: Optional[MetaData] = None,
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ignore_tables: Optional[List[str]] = None,
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include_tables: Optional[List[str]] = None,
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sample_rows_in_table_info: int = 3,
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):
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"""Create engine from database URI."""
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self._engine = engine
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self._schema = schema
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if include_tables and ignore_tables:
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raise ValueError("Cannot specify both include_tables and ignore_tables")
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self._inspector = inspect(self._engine)
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self._all_tables = set(self._inspector.get_table_names(schema=schema))
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self._include_tables = set(include_tables) if include_tables else set()
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if self._include_tables:
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missing_tables = self._include_tables - self._all_tables
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if missing_tables:
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raise ValueError(
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f"include_tables {missing_tables} not found in database"
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)
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self._ignore_tables = set(ignore_tables) if ignore_tables else set()
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if self._ignore_tables:
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missing_tables = self._ignore_tables - self._all_tables
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if missing_tables:
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raise ValueError(
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f"ignore_tables {missing_tables} not found in database"
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)
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if not isinstance(sample_rows_in_table_info, int):
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raise TypeError("sample_rows_in_table_info must be an integer")
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self._sample_rows_in_table_info = sample_rows_in_table_info
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self._metadata = metadata or MetaData()
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self._metadata.reflect(bind=self._engine)
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@classmethod
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def from_uri(cls, database_uri: str, **kwargs: Any) -> SQLDatabase:
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"""Construct a SQLAlchemy engine from URI."""
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return cls(create_engine(database_uri), **kwargs)
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@property
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def dialect(self) -> str:
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"""Return string representation of dialect to use."""
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return self._engine.dialect.name
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def get_table_names(self) -> Iterable[str]:
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"""Get names of tables available."""
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if self._include_tables:
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return self._include_tables
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return self._all_tables - self._ignore_tables
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@property
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def table_info(self) -> str:
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"""Information about all tables in the database."""
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return self.get_table_info()
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def get_table_info(self, table_names: Optional[List[str]] = None) -> str:
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"""Get information about specified tables.
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Follows best practices as specified in: Rajkumar et al, 2022
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(https://arxiv.org/abs/2204.00498)
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If `sample_rows_in_table_info`, the specified number of sample rows will be
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appended to each table description. This can increase performance as
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demonstrated in the paper.
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"""
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all_table_names = self.get_table_names()
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if table_names is not None:
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missing_tables = set(table_names).difference(all_table_names)
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if missing_tables:
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raise ValueError(f"table_names {missing_tables} not found in database")
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all_table_names = table_names
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meta_tables = [
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tbl
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for tbl in self._metadata.sorted_tables
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if tbl.name in set(all_table_names)
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and not (self.dialect == "sqlite" and tbl.name.startswith("sqlite_"))
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]
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tables = []
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for table in meta_tables:
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# add create table command
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create_table = str(CreateTable(table).compile(self._engine))
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if self._sample_rows_in_table_info:
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# build the select command
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command = select(table).limit(self._sample_rows_in_table_info)
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# save the command in string format
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select_star = (
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f"SELECT * FROM '{table.name}' LIMIT "
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f"{self._sample_rows_in_table_info}"
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)
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# save the columns in string format
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columns_str = " ".join([col.name for col in table.columns])
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try:
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# get the sample rows
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with self._engine.connect() as connection:
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sample_rows = connection.execute(command)
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# shorten values in the sample rows
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sample_rows = list(
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map(lambda ls: [str(i)[:100] for i in ls], sample_rows)
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)
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# save the sample rows in string format
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sample_rows_str = "\n".join([" ".join(row) for row in sample_rows])
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# in some dialects when there are no rows in the table a
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# 'ProgrammingError' is returned
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except ProgrammingError:
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sample_rows_str = ""
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# build final info for table
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tables.append(
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create_table
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+ select_star
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+ ";\n"
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+ columns_str
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+ "\n"
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+ sample_rows_str
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)
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else:
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tables.append(create_table)
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final_str = "\n\n".join(tables)
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return final_str
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def run(self, command: str, fetch: str = "all") -> str:
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"""Execute a SQL command and return a string representing the results.
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If the statement returns rows, a string of the results is returned.
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If the statement returns no rows, an empty string is returned.
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"""
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with self._engine.begin() as connection:
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if self._schema is not None:
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connection.exec_driver_sql(f"SET search_path TO {self._schema}")
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cursor = connection.exec_driver_sql(command)
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if cursor.returns_rows:
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if fetch == "all":
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result = cursor.fetchall()
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elif fetch == "one":
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result = cursor.fetchone()[0]
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else:
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raise ValueError("Fetch parameter must be either 'one' or 'all'")
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return str(result)
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return ""
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