Files
langchain-python/langchain/vectorstores/chroma.py
T
0xcha05 e41b382e1c Added filter and delete all option to delete function in Pinecone integration, updated base VectorStore's delete function (#6876)
### Description:
Updated the delete function in the Pinecone integration to allow for
deletion of vectors by specifying a filter condition, and to delete all
vectors in a namespace.

Made the ids parameter optional in the delete function in the base
VectorStore class and allowed for additional keyword arguments.

Updated the delete function in several classes (Redis, Chroma, Supabase,
Deeplake, Elastic, Weaviate, and Cassandra) to match the changes made in
the base VectorStore class. This involved making the ids parameter
optional and allowing for additional keyword arguments.
2023-07-02 11:46:19 -07:00

480 lines
18 KiB
Python

"""Wrapper around ChromaDB embeddings platform."""
from __future__ import annotations
import logging
import uuid
from typing import TYPE_CHECKING, Any, Dict, Iterable, List, Optional, Tuple, Type
import numpy as np
from langchain.docstore.document import Document
from langchain.embeddings.base import Embeddings
from langchain.utils import xor_args
from langchain.vectorstores.base import VectorStore
from langchain.vectorstores.utils import maximal_marginal_relevance
if TYPE_CHECKING:
import chromadb
import chromadb.config
from chromadb.api.types import ID, OneOrMany, Where, WhereDocument
logger = logging.getLogger()
DEFAULT_K = 4 # Number of Documents to return.
def _results_to_docs(results: Any) -> List[Document]:
return [doc for doc, _ in _results_to_docs_and_scores(results)]
def _results_to_docs_and_scores(results: Any) -> List[Tuple[Document, float]]:
return [
# TODO: Chroma can do batch querying,
# we shouldn't hard code to the 1st result
(Document(page_content=result[0], metadata=result[1] or {}), result[2])
for result in zip(
results["documents"][0],
results["metadatas"][0],
results["distances"][0],
)
]
class Chroma(VectorStore):
"""Wrapper around ChromaDB embeddings platform.
To use, you should have the ``chromadb`` python package installed.
Example:
.. code-block:: python
from langchain.vectorstores import Chroma
from langchain.embeddings.openai import OpenAIEmbeddings
embeddings = OpenAIEmbeddings()
vectorstore = Chroma("langchain_store", embeddings)
"""
_LANGCHAIN_DEFAULT_COLLECTION_NAME = "langchain"
def __init__(
self,
collection_name: str = _LANGCHAIN_DEFAULT_COLLECTION_NAME,
embedding_function: Optional[Embeddings] = None,
persist_directory: Optional[str] = None,
client_settings: Optional[chromadb.config.Settings] = None,
collection_metadata: Optional[Dict] = None,
client: Optional[chromadb.Client] = None,
) -> None:
"""Initialize with Chroma client."""
try:
import chromadb
import chromadb.config
except ImportError:
raise ValueError(
"Could not import chromadb python package. "
"Please install it with `pip install chromadb`."
)
if client is not None:
self._client = client
else:
if client_settings:
self._client_settings = client_settings
else:
self._client_settings = chromadb.config.Settings()
if persist_directory is not None:
self._client_settings = chromadb.config.Settings(
chroma_db_impl="duckdb+parquet",
persist_directory=persist_directory,
)
self._client = chromadb.Client(self._client_settings)
self._embedding_function = embedding_function
self._persist_directory = persist_directory
self._collection = self._client.get_or_create_collection(
name=collection_name,
embedding_function=self._embedding_function.embed_documents
if self._embedding_function is not None
else None,
metadata=collection_metadata,
)
@xor_args(("query_texts", "query_embeddings"))
def __query_collection(
self,
query_texts: Optional[List[str]] = None,
query_embeddings: Optional[List[List[float]]] = None,
n_results: int = 4,
where: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Document]:
"""Query the chroma collection."""
try:
import chromadb # noqa: F401
except ImportError:
raise ValueError(
"Could not import chromadb python package. "
"Please install it with `pip install chromadb`."
)
return self._collection.query(
query_texts=query_texts,
query_embeddings=query_embeddings,
n_results=n_results,
where=where,
**kwargs,
)
def add_texts(
self,
texts: Iterable[str],
metadatas: Optional[List[dict]] = None,
ids: Optional[List[str]] = None,
**kwargs: Any,
) -> List[str]:
"""Run more texts through the embeddings and add to the vectorstore.
Args:
texts (Iterable[str]): Texts to add to the vectorstore.
metadatas (Optional[List[dict]], optional): Optional list of metadatas.
ids (Optional[List[str]], optional): Optional list of IDs.
Returns:
List[str]: List of IDs of the added texts.
"""
# TODO: Handle the case where the user doesn't provide ids on the Collection
if ids is None:
ids = [str(uuid.uuid1()) for _ in texts]
embeddings = None
if self._embedding_function is not None:
embeddings = self._embedding_function.embed_documents(list(texts))
self._collection.upsert(
metadatas=metadatas, embeddings=embeddings, documents=texts, ids=ids
)
return ids
def similarity_search(
self,
query: str,
k: int = DEFAULT_K,
filter: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Document]:
"""Run similarity search with Chroma.
Args:
query (str): Query text to search for.
k (int): Number of results to return. Defaults to 4.
filter (Optional[Dict[str, str]]): Filter by metadata. Defaults to None.
Returns:
List[Document]: List of documents most similar to the query text.
"""
docs_and_scores = self.similarity_search_with_score(query, k, filter=filter)
return [doc for doc, _ in docs_and_scores]
def similarity_search_by_vector(
self,
embedding: List[float],
k: int = DEFAULT_K,
filter: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Document]:
"""Return docs most similar to embedding vector.
Args:
embedding (str): Embedding to look up documents similar to.
k (int): Number of Documents to return. Defaults to 4.
filter (Optional[Dict[str, str]]): Filter by metadata. Defaults to None.
Returns:
List of Documents most similar to the query vector.
"""
results = self.__query_collection(
query_embeddings=embedding, n_results=k, where=filter
)
return _results_to_docs(results)
def similarity_search_with_score(
self,
query: str,
k: int = DEFAULT_K,
filter: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Tuple[Document, float]]:
"""Run similarity search with Chroma with distance.
Args:
query (str): Query text to search for.
k (int): Number of results to return. Defaults to 4.
filter (Optional[Dict[str, str]]): Filter by metadata. Defaults to None.
Returns:
List[Tuple[Document, float]]: List of documents most similar to
the query text and cosine distance in float for each.
Lower score represents more similarity.
"""
if self._embedding_function is None:
results = self.__query_collection(
query_texts=[query], n_results=k, where=filter
)
else:
query_embedding = self._embedding_function.embed_query(query)
results = self.__query_collection(
query_embeddings=[query_embedding], n_results=k, where=filter
)
return _results_to_docs_and_scores(results)
def _similarity_search_with_relevance_scores(
self,
query: str,
k: int = 4,
**kwargs: Any,
) -> List[Tuple[Document, float]]:
return self.similarity_search_with_score(query, k, **kwargs)
def max_marginal_relevance_search_by_vector(
self,
embedding: List[float],
k: int = DEFAULT_K,
fetch_k: int = 20,
lambda_mult: float = 0.5,
filter: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Document]:
"""Return docs selected using the maximal marginal relevance.
Maximal marginal relevance optimizes for similarity to query AND diversity
among selected documents.
Args:
embedding: Embedding to look up documents similar to.
k: Number of Documents to return. Defaults to 4.
fetch_k: Number of Documents to fetch to pass to MMR algorithm.
lambda_mult: Number between 0 and 1 that determines the degree
of diversity among the results with 0 corresponding
to maximum diversity and 1 to minimum diversity.
Defaults to 0.5.
filter (Optional[Dict[str, str]]): Filter by metadata. Defaults to None.
Returns:
List of Documents selected by maximal marginal relevance.
"""
results = self.__query_collection(
query_embeddings=embedding,
n_results=fetch_k,
where=filter,
include=["metadatas", "documents", "distances", "embeddings"],
)
mmr_selected = maximal_marginal_relevance(
np.array(embedding, dtype=np.float32),
results["embeddings"][0],
k=k,
lambda_mult=lambda_mult,
)
candidates = _results_to_docs(results)
selected_results = [r for i, r in enumerate(candidates) if i in mmr_selected]
return selected_results
def max_marginal_relevance_search(
self,
query: str,
k: int = DEFAULT_K,
fetch_k: int = 20,
lambda_mult: float = 0.5,
filter: Optional[Dict[str, str]] = None,
**kwargs: Any,
) -> List[Document]:
"""Return docs selected using the maximal marginal relevance.
Maximal marginal relevance optimizes for similarity to query AND diversity
among selected documents.
Args:
query: Text to look up documents similar to.
k: Number of Documents to return. Defaults to 4.
fetch_k: Number of Documents to fetch to pass to MMR algorithm.
lambda_mult: Number between 0 and 1 that determines the degree
of diversity among the results with 0 corresponding
to maximum diversity and 1 to minimum diversity.
Defaults to 0.5.
filter (Optional[Dict[str, str]]): Filter by metadata. Defaults to None.
Returns:
List of Documents selected by maximal marginal relevance.
"""
if self._embedding_function is None:
raise ValueError(
"For MMR search, you must specify an embedding function on" "creation."
)
embedding = self._embedding_function.embed_query(query)
docs = self.max_marginal_relevance_search_by_vector(
embedding, k, fetch_k, lambda_mul=lambda_mult, filter=filter
)
return docs
def delete_collection(self) -> None:
"""Delete the collection."""
self._client.delete_collection(self._collection.name)
def get(
self,
ids: Optional[OneOrMany[ID]] = None,
where: Optional[Where] = None,
limit: Optional[int] = None,
offset: Optional[int] = None,
where_document: Optional[WhereDocument] = None,
include: Optional[List[str]] = None,
) -> Dict[str, Any]:
"""Gets the collection.
Args:
ids: The ids of the embeddings to get. Optional.
where: A Where type dict used to filter results by.
E.g. `{"color" : "red", "price": 4.20}`. Optional.
limit: The number of documents to return. Optional.
offset: The offset to start returning results from.
Useful for paging results with limit. Optional.
where_document: A WhereDocument type dict used to filter by the documents.
E.g. `{$contains: {"text": "hello"}}`. Optional.
include: A list of what to include in the results.
Can contain `"embeddings"`, `"metadatas"`, `"documents"`.
Ids are always included.
Defaults to `["metadatas", "documents"]`. Optional.
"""
kwargs = {
"ids": ids,
"where": where,
"limit": limit,
"offset": offset,
"where_document": where_document,
}
if include is not None:
kwargs["include"] = include
return self._collection.get(**kwargs)
def persist(self) -> None:
"""Persist the collection.
This can be used to explicitly persist the data to disk.
It will also be called automatically when the object is destroyed.
"""
if self._persist_directory is None:
raise ValueError(
"You must specify a persist_directory on"
"creation to persist the collection."
)
self._client.persist()
def update_document(self, document_id: str, document: Document) -> None:
"""Update a document in the collection.
Args:
document_id (str): ID of the document to update.
document (Document): Document to update.
"""
text = document.page_content
metadata = document.metadata
if self._embedding_function is None:
raise ValueError(
"For update, you must specify an embedding function on creation."
)
embeddings = self._embedding_function.embed_documents([text])
self._collection.update(
ids=[document_id],
embeddings=embeddings,
documents=[text],
metadatas=[metadata],
)
@classmethod
def from_texts(
cls: Type[Chroma],
texts: List[str],
embedding: Optional[Embeddings] = None,
metadatas: Optional[List[dict]] = None,
ids: Optional[List[str]] = None,
collection_name: str = _LANGCHAIN_DEFAULT_COLLECTION_NAME,
persist_directory: Optional[str] = None,
client_settings: Optional[chromadb.config.Settings] = None,
client: Optional[chromadb.Client] = None,
**kwargs: Any,
) -> Chroma:
"""Create a Chroma vectorstore from a raw documents.
If a persist_directory is specified, the collection will be persisted there.
Otherwise, the data will be ephemeral in-memory.
Args:
texts (List[str]): List of texts to add to the collection.
collection_name (str): Name of the collection to create.
persist_directory (Optional[str]): Directory to persist the collection.
embedding (Optional[Embeddings]): Embedding function. Defaults to None.
metadatas (Optional[List[dict]]): List of metadatas. Defaults to None.
ids (Optional[List[str]]): List of document IDs. Defaults to None.
client_settings (Optional[chromadb.config.Settings]): Chroma client settings
Returns:
Chroma: Chroma vectorstore.
"""
chroma_collection = cls(
collection_name=collection_name,
embedding_function=embedding,
persist_directory=persist_directory,
client_settings=client_settings,
client=client,
)
chroma_collection.add_texts(texts=texts, metadatas=metadatas, ids=ids)
return chroma_collection
@classmethod
def from_documents(
cls: Type[Chroma],
documents: List[Document],
embedding: Optional[Embeddings] = None,
ids: Optional[List[str]] = None,
collection_name: str = _LANGCHAIN_DEFAULT_COLLECTION_NAME,
persist_directory: Optional[str] = None,
client_settings: Optional[chromadb.config.Settings] = None,
client: Optional[chromadb.Client] = None, # Add this line
**kwargs: Any,
) -> Chroma:
"""Create a Chroma vectorstore from a list of documents.
If a persist_directory is specified, the collection will be persisted there.
Otherwise, the data will be ephemeral in-memory.
Args:
collection_name (str): Name of the collection to create.
persist_directory (Optional[str]): Directory to persist the collection.
ids (Optional[List[str]]): List of document IDs. Defaults to None.
documents (List[Document]): List of documents to add to the vectorstore.
embedding (Optional[Embeddings]): Embedding function. Defaults to None.
client_settings (Optional[chromadb.config.Settings]): Chroma client settings
Returns:
Chroma: Chroma vectorstore.
"""
texts = [doc.page_content for doc in documents]
metadatas = [doc.metadata for doc in documents]
return cls.from_texts(
texts=texts,
embedding=embedding,
metadatas=metadatas,
ids=ids,
collection_name=collection_name,
persist_directory=persist_directory,
client_settings=client_settings,
client=client,
)
def delete(self, ids: Optional[List[str]] = None, **kwargs: Any) -> None:
"""Delete by vector IDs.
Args:
ids: List of ids to delete.
"""
self._collection.delete(ids=ids)