This is needed for both tools/syz-db and tools/syz-trace2syz.
Also, remove code to resolve SHA1 collisions.
Also, don't set db version as we actually want to minimize
and smash these programs like anything else
(not minimizing nor smashing them is only useful during tool testing).
By default we don't re-minimize/re-smash programs from corpus,
it takes lots of time on start and is unnecessary.
However, when we improve/fix minimization/smashing,
we may want to.
Introduce corpus database versions and allow to re-minimize/re-smash
on version bumps.
Currently we have unix permissions for new files/dirs
hardcoded throughout the code base. Some places use 0644,
some - 0640, some - 0600 and a variety of other constants.
Introduce osutil.MkdirAll/WriteFile that use the default
permissions and use them throughout the code base.
This makes permissions consistent and also allows to easily
change the permissions later if we change our minds.
Also merge pkg/fileutil into pkg/osutil as they become
dependent on each other. The line between them was poorly
defined anyway as both operate on files.