Update PENTEST_ORCHESTRATION.md to modify Makefile inclusion path and set environment variable for maximum output tokens

PENTEST_ORCHESTRATION.md

@@ -30,6 +30,8 @@ cd /Users/arjunmalleswaran/Code/pentest-workspaces/$BENCHMARK
 ```
 
 ### Step 2: Build and Run Benchmark
+update the XBEN Makefile from `include ../../common.mk` to `include ../common.mk`
+
 ```bash
 # Build the benchmark
 make build
@@ -45,6 +47,7 @@ make run
 ```bash
 # Example command structure:
 cd /Users/arjunmalleswaran/Code/shannon
+export CLAUDE_CODE_MAX_OUTPUT_TOKENS=64000
 ./shannon.mjs http://localhost:X /Users/arjunmalleswaran/Code/pentest-workspaces/$BENCHMARK
 ```
 
@@ -58,19 +61,7 @@ cp -r /Users/arjunmalleswaran/Code/pentest-workspaces/$BENCHMARK/deliverables \
       /Users/arjunmalleswaran/Code/pentest-results/$BENCHMARK/
 
 # Find and copy the latest audit-logs folder
-# Pattern: shannon/audit-logs/{sanitized-url}_{uuid}/
-# You'll need to identify the correct folder (newest one matching your run)
 export LATEST_AUDIT_LOG=folder-name-of-logs-in-shannon
 cp -r /Users/arjunmalleswaran/Code/shannon/audit-logs/$LATEST_AUDIT_LOG \
       /Users/arjunmalleswaran/Code/pentest-results/$BENCHMARK/audit-logs
-```
-
-### Step 6: Cleanup (Optional)
-```bash
-# Stop the benchmark containers
-cd /Users/arjunmalleswaran/Code/pentest-workspaces/$BENCHMARK
-make stop  # or docker-compose down
-
-# Remove workspace to save disk space (optional)
-rm -rf /Users/arjunmalleswaran/Code/pentest-workspaces/$BENCHMARK
 ```