fix(process): preserve Linux ownership inspection failures

# Conflicts:
#	src/application/reverse/ReverseEngineeringService.ts

.agents/skills/rea-analysis-optimization/SKILL.md

@@ -10,8 +10,8 @@ equivalent completed investigations. A useful outcome can also be a measured
 decision to leave an implementation alone.
 
 Follow the checkout's [performance priorities](../../../AGENTS.md#performance),
-[tool design](../../../docs/development/tool-design.md), and
-[testing guide](../../../docs/development/testing.md). This skill supplies an optimization
+[tool design](../../../docs/tool-design.md), and
+[testing guide](../../../docs/testing.md). This skill supplies an optimization
 workflow, not additional permission to execute targets, publish, or merge.
 Use the current contracts, provider prerequisites, and user authorization.
 

.agents/skills/rea-changelog-update/SKILL.md

@@ -6,7 +6,7 @@ description: Prepare or rewrite REA release changelogs and GitHub release notes
 # REA changelog update
 
 Use this for release-note preparation and contributor attribution. Read
-[docs/development/releasing.md](../../../docs/development/releasing.md) from the repository root for
+[docs/releasing.md](../../../docs/releasing.md) from the repository root for
 publication authority and the existing checkpoint checks. This skill prepares
 notes; it does not authorize merging, tagging, or publishing.
 

.agents/skills/rea-ci-tests-audit/SKILL.md

@@ -9,7 +9,7 @@ Establish which checks still catch real regressions and which costs can be
 removed without losing that protection. The outcome may be a verified fix,
 an evidence-backed recommendation, or an explicit decision to stop.
 
-Follow the checkout's `AGENTS.md`, [testing guide](../../../docs/development/testing.md),
+Follow the checkout's `AGENTS.md`, [testing guide](../../../docs/testing.md),
 and [contribution rules](../../../CONTRIBUTING.md). Use their current commands
 and pinned toolchain, rather than commands remembered from an earlier audit.
 Preserve the requested scope: investigation alone does not authorize edits;

.agents/skills/rea-tool-design/SKILL.md

@@ -5,7 +5,7 @@ description: Audit, investigate, design, or change REA investigation tools, CLI/
 
 # REA tool design
 
-Use the [tool-design guide](../../../docs/development/tool-design.md) for tool boundaries,
+Use the [tool-design guide](../../../docs/tool-design.md) for tool boundaries,
 contract semantics, provider ownership, and discoverability. Inspect the current
 contract and nearest existing tool relevant to the analyst question; source,
 documentation, and live catalogs may describe different versions.
@@ -14,12 +14,12 @@ For provider-backed work, exercise the analyst's task through REA and compare
 relevant native provider and independent artifact observations where available.
 Check applicable partial results, recovery and session boundaries; report what
 was not exercised. For failure guidance, follow [design recovery around the
-failure](../../../docs/development/tool-design.md#design-recovery-around-the-failure).
-Use [workflow verification](../../../docs/development/testing.md#provider-backed-workflow-verification)
+failure](../../../docs/tool-design.md#design-recovery-around-the-failure).
+Use [workflow verification](../../../docs/testing.md#provider-backed-workflow-verification)
 to select evidence for the proposed contract instead of seeking provider API
 parity.
 
-For an audit, follow [audit existing tools](../../../docs/development/tool-design.md#audit-existing-tools):
+For an audit, follow [audit existing tools](../../../docs/tool-design.md#audit-existing-tools):
 scope representative tasks, exercise the live workflow, and distinguish
 reproduced bugs, supported limitations, design opportunities and unverified
 claims. Check relevant rendered MCP prompts, guided workflows and packaged skill
@@ -30,7 +30,7 @@ For a design request, return the proposed boundary, input/result shape, Evidence
 semantics, nearest alternative, and verification approach. Implement when
 requested, preserving the user's scope and existing authorization.
 
-For implementation or verification, consult [testing](../../../docs/development/testing.md)
+For implementation or verification, consult [testing](../../../docs/testing.md)
 for the affected consumer and provider lanes, and
 [contributing](../../../CONTRIBUTING.md) for generated-file ownership. Read
 provider/workflow guides only as the task requires.

.agents/skills/reverse-engineer-anything/SKILL.md

@@ -2,7 +2,7 @@
 name: reverse-engineer-anything
 description: Reverse engineer native, managed, Electron/JavaScript, packaged, firmware, and browser targets with REA, and build agent environments (AgentEnv bundles) of web applications from a live instance or a capture. Use shipped-artifact or requested runtime evidence to explain features, compare versions, decompile code, or guide a reconstruction. Skip REA for ordinary source-repository architecture analysis.
 metadata:
-  version: "61"
+  version: "60"
 ---
 
 # REA
@@ -108,9 +108,9 @@ explicit path or endpoint and do not need it.
 - Firmware image: `inspect_firmware_regions` when advertised. Use
   `extract_firmware` when extraction is requested, with a caller-selected new
   absolute output directory. These tools use caller-supplied Binwalk/Unblob on
-  Linux; see the [firmware guide](https://github.com/morluto/rea/blob/main/docs/guides/firmware/firmware-analysis.md).
+  Linux; see the [firmware guide](https://github.com/morluto/rea/blob/main/docs/firmware-analysis.md).
 - ESP32-family app or bootloader image (`0xE9` magic): `inspect_artifact`
-  without a provider; read [ESP images](references/firmware-and-raw-images.md#esp-images).
+  without a provider; see the ESP section of `references/native-and-artifacts.md`.
 - .NET NativeAOT PE/ELF: native Ghidra analysis. Native code can yield pseudocode;
   consult the NativeAOT workflow in `references/native-and-artifacts.md` for
   optional metadata recovery and its supported host/layout boundary.
@@ -150,7 +150,7 @@ explicit path or endpoint and do not need it.
   old-generation heap is `REA_CAPTURE_DECODER_OLD_GENERATION_MIB` (default 192 MiB,
   floor 8, maximum 16384), set where REA starts. Host memory and `NODE_OPTIONS` do not
   raise it. See
-  [historical captures](https://github.com/morluto/rea/blob/main/docs/guides/web/web-network-captures.md) for the exact upstream
+  [historical captures](https://github.com/morluto/rea/blob/main/docs/web-network-captures.md) for the exact upstream
   profile and credential exclusions. Qlog support starts with aioquic 1.5.0
   JSON 0.3; stream coverage and endpoint loss declarations do not recover bodies
   or establish network loss. Prefer detail summary, then kind qlog trace/stream
@@ -165,7 +165,7 @@ explicit path or endpoint and do not need it.
   display filters and decode-as rules. Requires Linux, util-linux prlimit and
   TShark 4.x on an absolute `PATH` entry or via the optional absolute
   `REA_TSHARK_COMMAND` override; see
-  [capture guide](https://github.com/morluto/rea/blob/main/docs/guides/data/packet-captures.md).
+  [capture guide](https://github.com/morluto/rea/blob/main/docs/packet-captures.md).
   Packet limits count input packets before filtering. Output defaults to 50 matching
   frames; use `match_offset` / `match_limit` for later pages, or explicit null
   limit for complete matching output. Preserve the source digest across pages.
@@ -173,7 +173,7 @@ explicit path or endpoint and do not need it.
   For address/DNS/SNI/protocol summaries use `inspect_pcap_capture` with MCP
   detail summary, then retained kind pcap pages. Requires Wireshark 4.x tshark
   and capinfos, with Linux prlimit or Windows Job Objects; see
-  [packet summaries](https://github.com/morluto/rea/blob/main/docs/guides/data/pcap-analysis.md).
+  [packet summaries](https://github.com/morluto/rea/blob/main/docs/pcap-analysis.md).
   Select an exact DNS question for address pages; page exhaustion does not prove
   network completeness. This reads recordings and does not acquire traffic.
 - Decoder discovery: `inspect_signal_decoders` searches installed decoder IDs
@@ -181,7 +181,7 @@ explicit path or endpoint and do not need it.
   relevant details before choosing settings; this does not scan hardware.
 - Recorded logic/signal traces: `decode_signal_recording` with explicit decoder,
   channel and protocol settings. On Linux with util-linux prlimit, supply sigrok-cli 0.7.2 through
-  `REA_SIGROK_COMMAND`; see [recording guide](https://github.com/morluto/rea/blob/main/docs/guides/signals/signal-recordings.md).
+  `REA_SIGROK_COMMAND`; see [recording guide](https://github.com/morluto/rea/blob/main/docs/signal-recordings.md).
   Output defaults to 50 literal lines; select annotation classes and page with
   `line_offset` / `line_limit`, or explicit null for all remaining output.
   Window counts are display lines, not annotations or samples. Preserve source digests across pages.
@@ -190,7 +190,7 @@ explicit path or endpoint and do not need it.
   through `REA_WABT_BIN_DIRECTORY`; retain exact byte/tool identity and decoded WAT.
   Select JavaScript glue and candidate paths explicitly and preserve URL/path
   ambiguity. No implicit fetch or target execution; WAT is not original source.
-  See the [WASM guide](https://github.com/morluto/rea/blob/main/docs/guides/wasm/wasm-artifacts.md).
+  See the [WASM guide](https://github.com/morluto/rea/blob/main/docs/wasm-artifacts.md).
 - Explicit local Android APK (or ZIP/AAB) signing: `inspect_apk_signature`.
   Prefer its summary or selected signer/digest/lineage page; retain complete
   Evidence and use `inspect_analysis_view` kind `apk-signature` for follow-ups.
@@ -209,13 +209,13 @@ explicit path or endpoint and do not need it.
   Evidence stays retained under its original identity. Use the returned
   `parent_evidence_id` for exact function or `bytecode_hex`/stdout/stderr pages.
   Candidate coverage does not establish interface completeness. See the
-  [EVM bytecode guide](https://github.com/morluto/rea/blob/main/docs/guides/evm/evm-bytecode.md).
+  [EVM bytecode guide](https://github.com/morluto/rea/blob/main/docs/evm-bytecode.md).
 - Embedded Go compiler, module or build-setting metadata: `inspect_go_binary`
   with the explicit local file. This built-in target-free inspection requires no
   Go installation or disassembler. Preserve raw module bytes and source ranges;
   absent metadata does not prove a binary is not Go, and unparsed text records
   remain explicit. See the
-  [Go binary guide](https://github.com/morluto/rea/blob/main/docs/guides/native/go-binaries.md).
+  [Go binary guide](https://github.com/morluto/rea/blob/main/docs/go-binaries.md).
 - Embedded CUDA/HIP code objects: `inspect_gpu_code_objects`; inventory targets
   first, then decode selected payloads and query retained GPU Evidence.
 - Bundled GGUF or safetensors model declarations: `inspect_model_artifact`
@@ -332,17 +332,17 @@ explicit path or endpoint and do not need it.
   20 rows; request `schema_scope: "database"` for the complete stored schema. Preserve both database and existing sibling WAL identity; row samples
   report truncation and have unspecified order. Use a quiescent snapshot rather
   than assuming a live database/WAL pair was copied atomically. See the
-  [SQLite guide](https://github.com/morluto/rea/blob/main/docs/guides/data/sqlite-databases.md).
+  [SQLite guide](https://github.com/morluto/rea/blob/main/docs/sqlite-databases.md).
 - Explicit Linux ELF file for offline layout, symbols, relocations or static
   mitigation evidence: `inspect_binary_layout`. This target-free operation uses
   caller-supplied pwntools without opening a disassembler database. Preserve its
   raw locations and inference/coverage limits; see the
-  [offline binary guide](https://github.com/morluto/rea/blob/main/docs/guides/native/binary-diagnostics.md).
+  [offline binary guide](https://github.com/morluto/rea/blob/main/docs/binary-diagnostics.md).
 - Supplied Linux x86-64 ELF core: `inspect_recorded_crash`. Read every recorded
   thread, raw note and source-bound register without opening a live target.
   Historical PIDs do not select live processes. Request `include_debugger_context`
   only when core-only mapping candidates help; see the
-  [recorded crash guide](https://github.com/morluto/rea/blob/main/docs/guides/native/recorded-crashes.md).
+  [recorded crash guide](https://github.com/morluto/rea/blob/main/docs/recorded-crashes.md).
 - PE resource type/name/language trees and static icon group references:
   `inspect_pe_resources` with an explicit path. This portable operation requires
   no active target or engine; opaque payloads retain file ranges and SHA-256.
@@ -358,9 +358,9 @@ The legacy attached profile binds the already-open GUI input by SHA-256 and
 leaves its database open. The modern headless profile creates and closes an
 owned private database without saving. Installation and registration reuse
 [mrexodia/ida-pro-mcp](https://github.com/mrexodia/ida-pro-mcp); see the
-[IDA provider guide](https://github.com/morluto/rea/blob/main/docs/providers/ida-provider.md).
+[IDA provider guide](https://github.com/morluto/rea/blob/main/docs/ida-provider.md).
 For migration to the separate native IDA MCP plugin, follow the guide's
-[legacy attached migration](https://github.com/morluto/rea/blob/main/docs/providers/ida-provider.md#migrate-a-legacy-attached-registration).
+[legacy attached migration](https://github.com/morluto/rea/blob/main/docs/ida-provider.md#migrate-a-legacy-attached-registration).
 Replace the upstream registration explicitly; modern mrexodia tools are not the
 native profile. Native attachment preserves the database but does not provide
 direct callers; check session availability and the guide's verification limits.
@@ -523,14 +523,8 @@ as complete while required questions remain open.
 
 ## Read only the relevant guide
 
-- Native binaries and managed assemblies:
+- Native binaries, managed assemblies, archives, and extraction:
   [references/native-and-artifacts.md](references/native-and-artifacts.md)
-- Firmware, headerless images, ESP images, and address-bearing containers:
-  [references/firmware-and-raw-images.md](references/firmware-and-raw-images.md)
-- Archive inventory, extraction, Godot PCK, UnityFS, wxapkg, and Bun:
-  [references/packages-and-archives.md](references/packages-and-archives.md)
-- Offline format headers, metadata, signatures, and database snapshots:
-  [references/format-inspectors.md](references/format-inspectors.md)
 - ASARs, extracted JavaScript, feature tracing, and version comparison:
   [references/javascript-applications.md](references/javascript-applications.md)
 - Android APK declarations, classes, methods, and static references:

.agents/skills/reverse-engineer-anything/references/android-applications.md

@@ -22,7 +22,7 @@ Preserve slot/relocation provenance and source coverage: matched means observed
 candidate presence; partial scans do not establish uniqueness or absence.
 This reads DEX/ELF bytes without loading the APK into the decompiler or executing
 target code. Runtime registration and loading remain unknown. See the
-[JNI guide](https://github.com/morluto/rea/blob/main/docs/guides/android/android-analysis.md#link-native-declarations-to-jni-candidates).
+[JNI guide](https://github.com/morluto/rea/blob/main/docs/android-analysis.md#link-native-declarations-to-jni-candidates).
 
 For an R8/ProGuard release build with its `mapping.txt`, pass the absolute
 `mapping_path` to `inspect_android_class` or `inspect_android_method`. Prefer

.agents/skills/reverse-engineer-anything/references/connection-and-recovery.md

@@ -11,7 +11,7 @@ main and an older release expose the same arguments. Tool-name prefixes belong
 to the client: find the canonical REA operation in its actual tool listing and
 server association before concluding that it is absent. A shared prefix alone
 does not establish which server an approval wildcard covers. See
-[client tool names and discovery](https://github.com/morluto/rea/blob/main/docs/getting-started/client-configuration.md#client-tool-names-and-discovery).
+[client tool names and discovery](https://github.com/morluto/rea/blob/main/docs/client-configuration.md#client-tool-names-and-discovery).
 
 ## Choose the remedy from the observed failure
 

.agents/skills/reverse-engineer-anything/references/evidence-workflows.md

@@ -47,7 +47,7 @@ member comparison CLI still takes two assembly paths; process comparison takes
 two capture Evidence JSON paths. Check command help for the installed version.
 An input bundle grants no implicit file lookup: `evidence-file` and historical
 graph file selectors are accepted only by contracts advertising them. See the
-[CLI reuse guide](https://github.com/morluto/rea/blob/main/docs/getting-started/cli.md#import-export-and-compare-evidence).
+[CLI reuse guide](https://github.com/morluto/rea/blob/main/docs/cli.md#import-export-and-compare-evidence).
 
 Completed `inspect_artifact` inventory also supports a summary and
 `view: {kind: "inventory", collection: "occurrences", logical_paths: ["package.json", "main.js"]}`.

.agents/skills/reverse-engineer-anything/references/firmware-and-raw-images.md

@@ -1,76 +0,0 @@
-# Firmware and raw images
-
-## Firmware regions and extraction
-
-Use `inspect_firmware_regions` when advertised. Use `extract_firmware` when
-extraction is requested, with a caller-selected new absolute output directory.
-These tools use caller-supplied Binwalk/Unblob on Linux; see the
-[firmware guide](https://github.com/morluto/rea/blob/main/docs/guides/firmware/firmware-analysis.md).
-
-## Headerless raw images and firmware containers
-
-For other headerless images (embedded firmware without ELF/Mach-O/PE/MZ
-headers), open with `format: "raw-binary"`, `architecture` (`x86`, `x86_64`,
-`arm`, `arm64`, `6502`, or `m68k`), and `entry_point` (`0x` hex). File offset 0 is mapped at
-that address. Hopper and IDA refuse this interpretation; Ghidra uses
-`BinaryLoader` with a generic language: big-endian for `m68k`, little-endian
-otherwise. Big-endian ARM, Thumb-only, and Cortex-M variants are unsupported.
-`6502` selects NMOS 6502; the entry and complete file mapping must fit within
-`0x0000..0xffff`. 65C02, 65816, cartridge containers, bank switching, and mapper
-semantics are unsupported. `m68k` requires an even entry and decodes the 68040
-superset of the 68000 family; Amiga/Atari containers and vector-table entry
-discovery are unsupported. Windows Ghidra P0 admits raw images only for `6502`. See [raw binary guide](https://github.com/morluto/rea/blob/main/docs/providers/raw-binary.md).
-
-Intel HEX, S-record, UF2 and DfuSe files are containers, not raw images:
-`inspect_artifact` lists address regions (UF2 per familyID, DfuSe per element
-with its alternate setting), and `extract_artifact` writes each region. Open an
-extracted region as `raw-binary` with its start address as `entry_point`. UF2
-numbering gaps leave coverage unknown; a DfuSe suffix CRC mismatch follows
-`integrity_policy`. See [UF2 and DfuSe](https://github.com/morluto/rea/blob/main/docs/uf2-dfuse.md).
-
-## ESP images
-
-For an ESP32-family app or bootloader image, `open_binary` then
-`inspect_artifact` with `detail: "summary"`. `root_format_metadata` holds the
-observed `header` and `descriptor` (its `kind` is the app or bootloader role)
-and the derived `chip`, `checksum`, `appended_sha256` and
-`undescribed_trailing` ranges. Segment rows (`segment-NN.bin`) carry
-`load_addr`, `classification` (`mapped`, `loaded`, `not-loaded` or `unknown`,
-per ESP-IDF `should_map`/`should_load`; RAM ranges are not checked) and
-`source_location`; select them with `inspect_analysis_view` and
-`logical_paths`. Signature blocks are `unverified`; `public_key_sha256`
-matches eFuse key digests.
-
-Unknown `source_coverage` means truncation or undescribed trailing bytes, such
-as the flash segments of a `--ram-only-header` image; do not infer absence
-from it. Erased flash is described. Integrity mismatches are facts, not
-refusals. ESP8266 images are refused, and flash-encrypted images are not
-recognized. Segments are not disassembled, and RISC-V or Xtensa segments
-cannot be opened as raw-binary. See
-[ESP images](https://github.com/morluto/rea/blob/main/docs/esp-image.md).
-
-## ESP flash images
-
-A whole-flash dump opens as `esp-flash-image`. `root_format_metadata` holds
-`partition_table` (its `method`: `default`, `caller` or a derived
-`scan`), `bootloader` and `apps` ESP image facts, the `otadata` records,
-`partitions_outside_dump` and `boot_selection`. Every table has a
-`boot_selection`: its `basis` names the bootloader's branch (`no-otadata`
-without otadata, `none` when the bootloader rejects the table, `unknown`
-when a record is missing), and it lists its `assumptions`;
-`running_partition` is always `unknown`. Each image names its entry
-`path`. With `detail: "summary"` the root kind is `esp-flash-image-summary`
-and each image is a compact `summary` (chip, entry point, segment count,
-classified load ranges, signature block count, descriptor identity,
-integrity); complete detail keeps every segment. Partition rows
-(`partitions/<label>.bin`) carry the declared `type`, `subtype`, names,
-`flash_address`, `size` and flags; `encrypted` is a storage flag, not
-proof of ciphertext. `written_offset`/`written_end` bound the bytes that
-are not erased: an app slot whose facts say `erased` can still hold an older
-image, and a limitation says so. For a dump read from another flash address, call
-`open_binary` with `format: "esp-flash-image"` and `flash_offset`; an
-`esp-image` whose `flash_dump` is set names that offset in a next probe; a
-relocated table can be named with `partition_table_offset`. No table found
-means unknown, often flash encryption. Extraction writes `nvs_keys` as
-ordinary data. See
-[ESP flash images](https://github.com/morluto/rea/blob/main/docs/esp-flash-image.md).

.agents/skills/reverse-engineer-anything/references/format-inspectors.md

@@ -1,303 +0,0 @@
-# Offline format and metadata inspection
-
-Read the section matching the supplied artifact; other sections are optional.
-
-- [Go build metadata](#go-build-metadata)
-- [Model files](#model-files)
-- [IL2CPP metadata](#il2cpp-metadata)
-- [Rust dependency metadata](#rust-dependency-metadata)
-- [PE Authenticode certificate tables](#pe-authenticode-certificate-tables)
-- [PE import and delay-load tables](#pe-import-and-delay-load-tables)
-- [PE TLS callbacks and load configuration](#pe-tls-callbacks-and-load-configuration)
-- [Binary hardening](#binary-hardening)
-- [ELF note tables](#elf-note-tables)
-- [Apple IPS crash reports](#apple-ips-crash-reports)
-- [Linux kernel modules](#linux-kernel-modules)
-- [CPython pyc files](#cpython-pyc-files)
-- [Erlang BEAM files](#erlang-beam-files)
-- [SQLite snapshots](#sqlite-snapshots)
-- [Recorded Linux crashes](#recorded-linux-crashes)
-- [Offline ELF layout](#offline-elf-layout)
-- [Offline WASM](#offline-wasm)
-- [Offline APK signatures](#offline-apk-signatures)
-- [Offline PE resource inventory](#offline-pe-resource-inventory)
-- [Offline PE and ELF export tables](#offline-pe-and-elf-export-tables)
-
-## Go build metadata
-
-Use `inspect_go_binary` for an explicit local ELF, PE or Mach-O (universal
-files need `architecture`) when the
-question concerns the embedded compiler version, module/dependency versions,
-local replacements or build settings. No `open_binary`, Go installation or
-target execution is required. The CLI equivalent is `inspect-go-binary PATH`.
-Preserve artifact SHA-256, original file ranges, framed module bytes and every
-unparsed module-text line. A missing record is an unknown, not proof of a
-non-Go binary; observed metadata does not authenticate its claims. Function,
-source and type recovery remain a separate native-analysis question.
-
-## Model files
-
-Use `inspect_model_artifact` (`inspect-model-artifact PATH`) for local GGUF v2/v3
-and safetensors declarations without a model runtime. Header-only mode does not
-read weights or establish full-file identity. `hash: "full"` explicitly streams
-all bytes. Retained `model-artifact` views page `metadata`, `tensors` and derived
-`types`, with exact batch filters and selected fields. Arrays retain typed counts
-and eight-element previews; omitted values, unknown types and runtime behavior
-stay explicit. See [model files](https://github.com/morluto/rea/blob/main/docs/model-artifacts.md).
-
-## IL2CPP metadata
-
-Use `inspect_il2cpp_metadata` for an explicit local Unity `global-metadata.dat`
-(versions 24, 27, 29, 31 and 39) when the question concerns assembly images,
-names, member owners, string literals, namespaces or index ranges. No `open_binary`, Unity installation or target
-execution is required. The CLI equivalent is `inspect-il2cpp-metadata PATH`.
-MCP defaults to counts with complete retained Evidence. Query `sections`,
-`images`, `types`, `methods`, `fields`, `properties`, `events`, `parameters` or
-`string_literals` through `inspect_analysis_view`; use exact names,
-batch indices and selected fields. Row indices are scoped by artifact SHA-256
-and collection; page offsets count filtered matches. Parameters support batch
-`method_indices` to read one method's parameters directly. Historical reports
-without member collections retain unknown counts rather than empty inventories. Preserve
-artifact SHA-256 and index widths. Unrecognized magic may mean encryption and
-is unsupported, not decrypted. Linking names to `GameAssembly` or
-`UnityFramework` code addresses remains a separate native-analysis question.
-See [IL2CPP metadata](https://github.com/morluto/rea/blob/main/docs/il2cpp-metadata.md).
-
-## Rust dependency metadata
-
-Use `inspect_rust_binary` for an explicit local ELF, PE, or Mach-O (universal
-files need `architecture`) when
-the question concerns the cargo-auditable crate list embedded in `.dep-v0`
-(Mach-O: `__DATA,.dep-v0`). No `open_binary`, Rust installation, or target
-execution is required. The CLI equivalent is `inspect-rust-binary PATH`.
-Preserve artifact SHA-256, package order, dependency indices, and the section
-file range. A missing section is null metadata, not proof the binary has no
-dependencies. An omitted package kind stays null. A rustc commit hash is
-inferred from a read-only `/rustc/<40-hex>/` path and does not by itself
-identify the compiler. See [Rust binaries](https://github.com/morluto/rea/blob/main/docs/rust-binaries.md).
-
-## PE Authenticode certificate tables
-
-Use `inspect_pe_certificates` for an explicit local PE32/PE32+ image when the
-question concerns the Authenticode certificate table, WIN_CERTIFICATE types, or
-embedded PKCS#7 signer and X.509 identity fields. No `open_binary`, Windows SDK,
-or target execution is required. The CLI equivalent is
-`inspect-pe-certificates PATH`. Preserve artifact SHA-256, table file ranges,
-payload hashes, original validity-time spellings, and
-`subject_key_identifier_hex` when the signer uses that form. A missing
-`IMAGE_DIRECTORY_ENTRY_SECURITY` directory is observed absence of that table,
-not proof the image is unsigned in every catalog or overlay sense. Signatures,
-chains, timestamps, and Authenticode digest coverage remain unobserved. See
-[PE Authenticode certificate tables](https://github.com/morluto/rea/blob/main/docs/pe-certificates.md).
-
-## PE import and delay-load tables
-
-Use `inspect_pe_imports` for an explicit local PE32/PE32+ image when the
-question concerns imported DLL and function names, ordinals, delay-load
-descriptors, or the pefile import hash. No `open_binary`, Windows SDK, or
-target execution is required. The CLI equivalent is `inspect-pe-imports PATH`.
-Preserve artifact SHA-256, directory file ranges, original DLL spellings, and
-ILT/IAT RVAs. A missing `IMAGE_DIRECTORY_ENTRY_IMPORT` directory is observed
-absence of that table, not proof the image never imported APIs through another
-table or overlay. Bound snapshots, loaded IAT contents, and export-forward
-resolution remain unobserved. See
-[PE import and delay-load tables](https://github.com/morluto/rea/blob/main/docs/pe-imports.md).
-
-## PE TLS callbacks and load configuration
-
-Use `inspect_pe_load_config` for an explicit local PE32/PE32+ image when the
-question concerns code that runs before the entry point through TLS callbacks,
-or the security cookie, SafeSEH, CFG, EH-continuation and XFG declarations in
-the load configuration. No `open_binary`, Windows SDK, or target execution is
-required. The CLI equivalent is `inspect-pe-load-config PATH`. Preserve artifact
-SHA-256, directory and callback-array file ranges, and callback VAs as
-hexadecimal strings. Fields outside the declared `Size` are `null`. Guard-flag
-mitigations carry `evidence_kind: "inferred"`; enforcement remains unobserved.
-See
-[PE TLS callbacks and load configuration](https://github.com/morluto/rea/blob/main/docs/pe-load-config.md).
-
-## Binary hardening
-
-Use `inspect_binary_hardening` for an explicit local ELF, PE, or Mach-O file
-when the question concerns PIE or ASLR, NX, RELRO, stack-protector or FORTIFY
-signs, control-flow flags, or stripped state. No `open_binary`, pwntools, or
-target execution is required. The CLI equivalent is
-`inspect-binary-hardening PATH`. Universal Mach-O files return one image per
-slice. A missing import is `unknown`, not proof the protection was omitted.
-Authenticode and Mach-O code-signature rows report presence, not validity.
-`hardened_runtime` stays unknown and names `inspect_signature`. See
-[binary hardening](https://github.com/morluto/rea/blob/main/docs/binary-hardening.md).
-
-## ELF note tables
-
-Use `inspect_elf_notes` for an explicit local ELF32/ELF64 image when the
-question concerns PT_NOTE/SHT_NOTE owners, GNU build-id, or GNU ABI-tag
-fields. No `open_binary` or target execution is required. The CLI equivalent
-is `inspect-elf-notes PATH`. Preserve artifact SHA-256, table file ranges,
-descriptor hashes, and original owner spellings. A missing table is observed
-absence of those declarations, not proof the image never carried notes in
-another container. See
-[ELF note tables](https://github.com/morluto/rea/blob/main/docs/elf-notes.md).
-
-## Apple IPS crash reports
-
-Use `inspect_apple_ips` for an explicit local Apple `.ips` file when the
-question concerns crash metadata, exception and termination facts, threads,
-usedImages, lossless registers, or documented crash classes. No `open_binary`,
-Xcode, atos, or target execution is required. The CLI equivalent is
-`inspect-apple-ips PATH`. Preserve artifact SHA-256, `bug_type` as a string,
-uppercase image UUIDs, and integer literals that exceed IEEE-754 range. Only
-`bug_type` `"309"` yields a crash body; other DiagnosticReports types return
-no crash result. Opened Mach-O and dSYM UUID joins remain unobserved. See
-[Apple IPS crash reports](https://github.com/morluto/rea/blob/main/docs/apple-ips.md).
-
-## Linux kernel modules
-
-Use `inspect_kernel_module` for an explicit local ELF32/ELF64 relocatable
-object when the question concerns `.modinfo` license, vermagic, alias,
-depends, or parm strings, the `__versions` symbol CRCs, or an appended module
-signature trailer. No `open_binary`, Linux host, or `modinfo` program is
-required. The CLI equivalent is `inspect-kernel-module PATH`. Preserve
-artifact SHA-256, key order, duplicate keys, CRC hex, and section file ranges.
-A missing section is observed absence when section names are known, not proof
-the module never carried that metadata. `.gnu.linkonce.this_module` is reported
-as present or absent; `struct module` stays unknown because its layout changes
-with the kernel version. `__ksymtab` records are not decoded. The PKCS#7 range
-and its SHA-256 are observed; certificate, signer, and digest coverage remain
-unvalidated. An absent trailer is not proof the module is unsigned in another
-container. gzip, xz, and zstd whole-file containers are unsupported and name
-`external_decompression` as the next probe: use an external codec utility to
-decompress into a separate file, then call `inspect_kernel_module` on that file. See
-[Linux kernel modules](https://github.com/morluto/rea/blob/main/docs/kernel-modules.md).
-
-## CPython pyc files
-
-Use `inspect_python_pyc` for an explicit local CPython 3.7–3.13 `.pyc` when the
-question concerns the header magic, PEP 552 source hash or timestamp, nested
-code-object names, or bytecode identity. No `open_binary`, Python installation,
-or target execution is required. The CLI equivalent is `inspect-python-pyc PATH`.
-Preserve artifact SHA-256, the 16-byte header fields, nested code names, and
-bytecode SHA-256. Bytecode is not decompiled. A decoded header does not prove
-the matching `.py` is present. See [CPython pyc inspection](https://github.com/morluto/rea/blob/main/docs/python-pyc.md).
-
-## Erlang BEAM files
-
-Use `inspect_erlang_beam` for an explicit local `FOR1`/`BEAM` file when the
-question concerns IFF chunks, atom names, exports, imports, lambdas, or the
-Code header. No `open_binary`, Erlang installation, or bytecode execution is
-required. The CLI equivalent is `inspect-erlang-beam PATH`. Preserve artifact
-SHA-256, chunk file ranges, 1-based atom indices, and original atom spellings.
-Missing optional tables stay null. For a few facts, use `detail: "summary"` with
-a `beam` view selecting a collection, exact names/indices and fields; read later
-pages from `parent_evidence_id` or the complete Evidence bundle. Same-name
-exports retain every arity and original atom index. CLI summary delivery requires
-`--evidence_output`. Null table counts remain distinct from decoded empty tables. See
-[Erlang BEAM files](https://github.com/morluto/rea/blob/main/docs/erlang-beam.md).
-
-## SQLite snapshots
-
-Use `inspect_sqlite_database` with an explicit local database snapshot for its
-schema and optional rows from one exact ordinary table. It requires Node.js
-24.x >=24.15 or 26+ with the native `DatabaseSync.limits` API. It also consumes the
-existing sibling `-wal`; retain both original digests when citing its result.
-Default output is a compact inventory; a selected table expands only its own
-schema and samples 20 rows. Select `columns` to avoid irrelevant or large cells,
-and request `schema_scope: "database"` only for complete schema details.
-Choose `row_limit` when a finite sample is useful and keep truncation and
-unspecified row order explicit. Virtual tables, shadow tables and views are
-schema facts, not row-read targets. REA inspects private copies and leaves
-the source files untouched; obtain a coherent quiescent database/WAL snapshot
-before inspection. See [SQLite snapshots](https://github.com/morluto/rea/blob/main/docs/guides/data/sqlite-databases.md).
-
-## Recorded Linux crashes
-
-Use `inspect_recorded_crash` with an explicit Linux x86-64 ELF core path to
-inspect historical thread registers, signals, raw notes and original file
-ranges. It is independent of the active disassembler target. Source-bound
-register values and note bytes are observations; missing notes, signal-thread
-association and current executable/library identity remain unknown. PIDs are
-historical metadata and never authorize live attach or control.
-
-The optional `include_debugger_context` facet adds mapping candidates through
-caller-supplied GDB/pwndbg in an owned core-only session. Display names do not
-establish current file identity; zero reported flags leave permissions unknown.
-Requested unavailable context fails with setup guidance. See
-[recorded crashes](https://github.com/morluto/rea/blob/main/docs/guides/native/recorded-crashes.md)
-for exact upstream profiles, bounds and verification coverage.
-
-## Offline ELF layout
-
-Use `inspect_binary_layout` with an explicit local ELF path for file-backed
-sections, symbols, relocations, linkage names, and static mitigation inferences
-without opening a disassembler target. When that complete record is already
-retained, call `inspect_analysis_view` for a summary, mitigations or linkage
-facet, one section or symbol, or a stable page. Do not re-run the decoder to
-read a single object.
-
-## Offline WASM
-
-Use `inspect_wasm_artifact` with caller-supplied WABT for selected local bytes.
-For counts, validation and WAT identity, select `detail: "summary"` on the first
-MCP call. The complete original Evidence stays retained; use
-`normalized_result.parent_evidence_id` for exact exports or text pages. Omitted
-or complete detail keeps the existing complete result.
-For a completed result, use `inspect_analysis_view` with its reported retained
-reference for a summary or `view: {kind: "wasm", facet: "exports", offset: 0, limit: 32}`.
-Facets also include sections, imports, candidates, glue, WAT, headers, details
-and tool profile. Text offsets count UTF-16 code units; follow `next_offset`.
-The complete source remains retained after an oversized MCP reply. No target
-execution or network acquisition is implied, and WAT is decoded representation.
-
-For exact core-module import/export differences, use `compare_wasm_interfaces`
-with two complete inspection Evidence records (or current-session retained
-references) and explicit scope. Preserve unknown types/duplicate names; static
-interface equality is not runtime compatibility. CLI accepts complete inline
-Evidence in `rea compare-wasm-interfaces input.json --json`, or exact references
-with `--evidence-bundle /absolute/path/evidence.json`. Use the complete parent
-ID when the inspection returned a summary.
-
-## Offline APK signatures
-
-Use `inspect_apk_signature` for a selected local APK/ZIP/AAB. Default MCP summaries
-retain complete Evidence. Select `view.collection: signers/digests/lineage`,
-with scheme or ID batches, fields and paging; use `inspect_analysis_view` kind
-`apk-signature` for retained reads after deletion. IDs retain artifact/scheme
-scope and signer links; `fields: []` keeps identity links. Empty pages preserve
-partial decoding reasons and unknown authenticity. CLI compact delivery needs
-`--evidence_output` to preserve the complete parent.
-It reads the APK
-Signing Block (v2/v3/v3.1) and v1 `META-INF` signing without executing anything,
-and reports each signer's certificate facts (for v1, the certificate the PKCS#7
-block's SignerInfo names), the declared v3 rotation lineage,
-the declared source-stamp certificate and, for SHA-256/SHA-512 digests, whether
-the declared content digest matches the current bytes. That match is not a
-signature verification: anyone who changes the bytes can recompute the digest.
-`posture` summarises v1-only signing (which cannot tell a v1-only APK from one
-whose v2/v3 block was removed), observed signer agreement across schemes,
-whether the v1 signer equals the block-scheme signer (`false` is notable),
-whether every differing signer appears in a declared (unverified) rotation
-lineage, and the strongest scheme.
-It never claims authenticity: no signature or lineage is cryptographically
-verified.
-
-## Offline PE resource inventory
-
-Use `inspect_pe_resources` with an absolute `path`, or
-`rea inspect-pe-resources ./selected.exe --json`, for portable PE32/PE32+
-resource inspection without opening a native target. Preserve returned Evidence:
-type/name/language IDs and UTF-16 names, original directory/data/payload ranges,
-code pages, payload hashes and static icon-group references. Same-language icon
-resolution is explicit; missing references and size mismatch remain visible.
-Other payloads are opaque, and this operation does not decode images or simulate
-Windows resource loading. Consult the budgets and supported tree profile in
-[offline binary diagnostics](https://github.com/morluto/rea/blob/main/docs/guides/native/binary-diagnostics.md).
-
-## Offline PE and ELF export tables
-
-Use `inspect_native_exports` with an absolute `path`, or
-`rea inspect-native-exports ./libexample.so --json`, to read a PE export
-directory or ELF dynamic symbol table on any host without opening a native
-target. Ordinal-only, forwarded and hidden-version exports stay distinct;
-partial or unsupported coverage means the inventory is incomplete, not that
-exports are absent. Use `inspect_macho` for Mach-O. See
-[offline binary diagnostics](https://github.com/morluto/rea/blob/main/docs/guides/native/binary-diagnostics.md).

.agents/skills/reverse-engineer-anything/references/javascript-applications.md

@@ -6,7 +6,7 @@ For captured or bundled JavaScript that needs readable source recovery, use
 `additional_paths` when advertised, then analyze the returned `analysis_input`
 directory together. Each input retains its own snapshot, digest and byte-range
 provenance; inputs and recovered code are never executed. Recovery requires a
-caller-supplied Wakaru on Linux x64; see [the recovery guide](https://github.com/morluto/rea/blob/main/docs/guides/javascript/javascript-recovery.md).
+caller-supplied Wakaru on Linux x64; see [the recovery guide](https://github.com/morluto/rea/blob/main/docs/javascript-recovery.md).
 
 Use `analyze_javascript_application` directly on the operator-supplied ASAR or
 extracted tree. When the question concerns known source paths and the connected

.agents/skills/reverse-engineer-anything/references/native-and-artifacts.md

@@ -1,21 +1,4 @@
-# Native and managed analysis
-
-Read the section matching the supplied artifact; other sections are optional.
-
-- [Other artifact guides](#other-artifact-guides)
-- [Apple app resources](#apple-app-resources)
-- [Desktop installation directories](#desktop-installation-directories)
-- [Native targets](#native-targets)
-- [Continue editable Ghidra analysis across processes](#continue-editable-ghidra-analysis-across-processes)
-- [Reuse caller-selected Ghidra analysis](#reuse-caller-selected-ghidra-analysis)
-- [Ghidra startup deadline recovery](#ghidra-startup-deadline-recovery)
-- [Bridge request ceiling](#bridge-request-ceiling)
-- [Selected native facts and call graphs](#selected-native-facts-and-call-graphs)
-- [Static memory and original file bytes](#static-memory-and-original-file-bytes)
-- [DOS MZ with Ghidra](#dos-mz-with-ghidra)
-- [Managed PE/CLI](#managed-pecli)
-- [DOS COM loader interpretation](#dos-com-loader-interpretation)
-- [Function annotations in Ghidra](#function-annotations-in-ghidra)
+# Native, managed, and packaged artifacts
 
 For release comparisons on one MCP connection, retain `list_procedures` Evidence
 from each target and reuse its exact IDs after target switches or `close_binary`.
@@ -79,6 +62,255 @@ runtime presence. For compact CLI output, use
 `inspect-desktop-application PATH --detail summary --evidence_output BUNDLE`.
 See [desktop installations](https://github.com/morluto/rea/blob/main/docs/desktop-applications.md).
 
+## Go build metadata
+
+Use `inspect_go_binary` for an explicit local ELF, PE or Mach-O (universal
+files need `architecture`) when the
+question concerns the embedded compiler version, module/dependency versions,
+local replacements or build settings. No `open_binary`, Go installation or
+target execution is required. The CLI equivalent is `inspect-go-binary PATH`.
+Preserve artifact SHA-256, original file ranges, framed module bytes and every
+unparsed module-text line. A missing record is an unknown, not proof of a
+non-Go binary; observed metadata does not authenticate its claims. Function,
+source and type recovery remain a separate native-analysis question.
+
+## Model files
+
+Use `inspect_model_artifact` (`inspect-model-artifact PATH`) for local GGUF v2/v3
+and safetensors declarations without a model runtime. Header-only mode does not
+read weights or establish full-file identity. `hash: "full"` explicitly streams
+all bytes. Retained `model-artifact` views page `metadata`, `tensors` and derived
+`types`, with exact batch filters and selected fields. Arrays retain typed counts
+and eight-element previews; omitted values, unknown types and runtime behavior
+stay explicit. See [model files](https://github.com/morluto/rea/blob/main/docs/model-artifacts.md).
+
+## IL2CPP metadata
+
+Use `inspect_il2cpp_metadata` for an explicit local Unity `global-metadata.dat`
+(versions 24, 27, 29, 31 and 39) when the question concerns assembly images,
+names, member owners, string literals, namespaces or index ranges. No `open_binary`, Unity installation or target
+execution is required. The CLI equivalent is `inspect-il2cpp-metadata PATH`.
+MCP defaults to counts with complete retained Evidence. Query `sections`,
+`images`, `types`, `methods`, `fields`, `properties`, `events`, `parameters` or
+`string_literals` through `inspect_analysis_view`; use exact names,
+batch indices and selected fields. Row indices are scoped by artifact SHA-256
+and collection; page offsets count filtered matches. Parameters support batch
+`method_indices` to read one method's parameters directly. Historical reports
+without member collections retain unknown counts rather than empty inventories. Preserve
+artifact SHA-256 and index widths. Unrecognized magic may mean encryption and
+is unsupported, not decrypted. Linking names to `GameAssembly` or
+`UnityFramework` code addresses remains a separate native-analysis question.
+See [IL2CPP metadata](https://github.com/morluto/rea/blob/main/docs/il2cpp-metadata.md).
+
+## Rust dependency metadata
+
+Use `inspect_rust_binary` for an explicit local ELF, PE, or Mach-O (universal
+files need `architecture`) when
+the question concerns the cargo-auditable crate list embedded in `.dep-v0`
+(Mach-O: `__DATA,.dep-v0`). No `open_binary`, Rust installation, or target
+execution is required. The CLI equivalent is `inspect-rust-binary PATH`.
+Preserve artifact SHA-256, package order, dependency indices, and the section
+file range. A missing section is null metadata, not proof the binary has no
+dependencies. An omitted package kind stays null. A rustc commit hash is
+inferred from a read-only `/rustc/<40-hex>/` path and does not by itself
+identify the compiler. See [Rust binaries](https://github.com/morluto/rea/blob/main/docs/rust-binaries.md).
+
+## PE Authenticode certificate tables
+
+Use `inspect_pe_certificates` for an explicit local PE32/PE32+ image when the
+question concerns the Authenticode certificate table, WIN_CERTIFICATE types, or
+embedded PKCS#7 signer and X.509 identity fields. No `open_binary`, Windows SDK,
+or target execution is required. The CLI equivalent is
+`inspect-pe-certificates PATH`. Preserve artifact SHA-256, table file ranges,
+payload hashes, original validity-time spellings, and
+`subject_key_identifier_hex` when the signer uses that form. A missing
+`IMAGE_DIRECTORY_ENTRY_SECURITY` directory is observed absence of that table,
+not proof the image is unsigned in every catalog or overlay sense. Signatures,
+chains, timestamps, and Authenticode digest coverage remain unobserved. See
+[PE Authenticode certificate tables](https://github.com/morluto/rea/blob/main/docs/pe-certificates.md).
+
+## PE import and delay-load tables
+
+Use `inspect_pe_imports` for an explicit local PE32/PE32+ image when the
+question concerns imported DLL and function names, ordinals, delay-load
+descriptors, or the pefile import hash. No `open_binary`, Windows SDK, or
+target execution is required. The CLI equivalent is `inspect-pe-imports PATH`.
+Preserve artifact SHA-256, directory file ranges, original DLL spellings, and
+ILT/IAT RVAs. A missing `IMAGE_DIRECTORY_ENTRY_IMPORT` directory is observed
+absence of that table, not proof the image never imported APIs through another
+table or overlay. Bound snapshots, loaded IAT contents, and export-forward
+resolution remain unobserved. See
+[PE import and delay-load tables](https://github.com/morluto/rea/blob/main/docs/pe-imports.md).
+
+## PE TLS callbacks and load configuration
+
+Use `inspect_pe_load_config` for an explicit local PE32/PE32+ image when the
+question concerns code that runs before the entry point through TLS callbacks,
+or the security cookie, SafeSEH, CFG, EH-continuation and XFG declarations in
+the load configuration. No `open_binary`, Windows SDK, or target execution is
+required. The CLI equivalent is `inspect-pe-load-config PATH`. Preserve artifact
+SHA-256, directory and callback-array file ranges, and callback VAs as
+hexadecimal strings. Fields outside the declared `Size` are `null`. Guard-flag
+mitigations carry `evidence_kind: "inferred"`; enforcement remains unobserved.
+See
+[PE TLS callbacks and load configuration](https://github.com/morluto/rea/blob/main/docs/pe-load-config.md).
+
+## Binary hardening
+
+Use `inspect_binary_hardening` for an explicit local ELF, PE, or Mach-O file
+when the question concerns PIE or ASLR, NX, RELRO, stack-protector or FORTIFY
+signs, control-flow flags, or stripped state. No `open_binary`, pwntools, or
+target execution is required. The CLI equivalent is
+`inspect-binary-hardening PATH`. Universal Mach-O files return one image per
+slice. A missing import is `unknown`, not proof the protection was omitted.
+Authenticode and Mach-O code-signature rows report presence, not validity.
+`hardened_runtime` stays unknown and names `inspect_signature`. See
+[binary hardening](https://github.com/morluto/rea/blob/main/docs/binary-hardening.md).
+
+## ELF note tables
+
+Use `inspect_elf_notes` for an explicit local ELF32/ELF64 image when the
+question concerns PT_NOTE/SHT_NOTE owners, GNU build-id, or GNU ABI-tag
+fields. No `open_binary` or target execution is required. The CLI equivalent
+is `inspect-elf-notes PATH`. Preserve artifact SHA-256, table file ranges,
+descriptor hashes, and original owner spellings. A missing table is observed
+absence of those declarations, not proof the image never carried notes in
+another container. See
+[ELF note tables](https://github.com/morluto/rea/blob/main/docs/elf-notes.md).
+
+## Apple IPS crash reports
+
+Use `inspect_apple_ips` for an explicit local Apple `.ips` file when the
+question concerns crash metadata, exception and termination facts, threads,
+usedImages, lossless registers, or documented crash classes. No `open_binary`,
+Xcode, atos, or target execution is required. The CLI equivalent is
+`inspect-apple-ips PATH`. Preserve artifact SHA-256, `bug_type` as a string,
+uppercase image UUIDs, and integer literals that exceed IEEE-754 range. Only
+`bug_type` `"309"` yields a crash body; other DiagnosticReports types return
+no crash result. Opened Mach-O and dSYM UUID joins remain unobserved. See
+[Apple IPS crash reports](https://github.com/morluto/rea/blob/main/docs/apple-ips.md).
+
+## Linux kernel modules
+
+Use `inspect_kernel_module` for an explicit local ELF32/ELF64 relocatable
+object when the question concerns `.modinfo` license, vermagic, alias,
+depends, or parm strings, the `__versions` symbol CRCs, or an appended module
+signature trailer. No `open_binary`, Linux host, or `modinfo` program is
+required. The CLI equivalent is `inspect-kernel-module PATH`. Preserve
+artifact SHA-256, key order, duplicate keys, CRC hex, and section file ranges.
+A missing section is observed absence when section names are known, not proof
+the module never carried that metadata. `.gnu.linkonce.this_module` is reported
+as present or absent; `struct module` stays unknown because its layout changes
+with the kernel version. `__ksymtab` records are not decoded. The PKCS#7 range
+and its SHA-256 are observed; certificate, signer, and digest coverage remain
+unvalidated. An absent trailer is not proof the module is unsigned in another
+container. gzip, xz, and zstd whole-file containers are unsupported and name
+`external_decompression` as the next probe: use an external codec utility to
+decompress into a separate file, then call `inspect_kernel_module` on that file. See
+[Linux kernel modules](https://github.com/morluto/rea/blob/main/docs/kernel-modules.md).
+
+## CPython pyc files
+
+Use `inspect_python_pyc` for an explicit local CPython 3.7–3.13 `.pyc` when the
+question concerns the header magic, PEP 552 source hash or timestamp, nested
+code-object names, or bytecode identity. No `open_binary`, Python installation,
+or target execution is required. The CLI equivalent is `inspect-python-pyc PATH`.
+Preserve artifact SHA-256, the 16-byte header fields, nested code names, and
+bytecode SHA-256. Bytecode is not decompiled. A decoded header does not prove
+the matching `.py` is present. See [CPython pyc inspection](https://github.com/morluto/rea/blob/main/docs/python-pyc.md).
+
+## Erlang BEAM files
+
+Use `inspect_erlang_beam` for an explicit local `FOR1`/`BEAM` file when the
+question concerns IFF chunks, atom names, exports, imports, lambdas, or the
+Code header. No `open_binary`, Erlang installation, or bytecode execution is
+required. The CLI equivalent is `inspect-erlang-beam PATH`. Preserve artifact
+SHA-256, chunk file ranges, 1-based atom indices, and original atom spellings.
+Missing optional tables stay null. For a few facts, use `detail: "summary"` with
+a `beam` view selecting a collection, exact names/indices and fields; read later
+pages from `parent_evidence_id` or the complete Evidence bundle. Same-name
+exports retain every arity and original atom index. CLI summary delivery requires
+`--evidence_output`. Null table counts remain distinct from decoded empty tables. See
+[Erlang BEAM files](https://github.com/morluto/rea/blob/main/docs/erlang-beam.md).
+
+## SQLite snapshots
+
+Use `inspect_sqlite_database` with an explicit local database snapshot for its
+schema and optional rows from one exact ordinary table. It requires Node.js
+24.x >=24.15 or 26+ with the native `DatabaseSync.limits` API. It also consumes the
+existing sibling `-wal`; retain both original digests when citing its result.
+Default output is a compact inventory; a selected table expands only its own
+schema and samples 20 rows. Select `columns` to avoid irrelevant or large cells,
+and request `schema_scope: "database"` only for complete schema details.
+Choose `row_limit` when a finite sample is useful and keep truncation and
+unspecified row order explicit. Virtual tables, shadow tables and views are
+schema facts, not row-read targets. REA inspects private copies and leaves
+the source files untouched; obtain a coherent quiescent database/WAL snapshot
+before inspection. See [SQLite snapshots](https://github.com/morluto/rea/blob/main/docs/sqlite-databases.md).
+
+## Recorded Linux crashes
+
+Use `inspect_recorded_crash` with an explicit Linux x86-64 ELF core path to
+inspect historical thread registers, signals, raw notes and original file
+ranges. It is independent of the active disassembler target. Source-bound
+register values and note bytes are observations; missing notes, signal-thread
+association and current executable/library identity remain unknown. PIDs are
+historical metadata and never authorize live attach or control.
+
+The optional `include_debugger_context` facet adds mapping candidates through
+caller-supplied GDB/pwndbg in an owned core-only session. Display names do not
+establish current file identity; zero reported flags leave permissions unknown.
+Requested unavailable context fails with setup guidance. See
+[recorded crashes](https://github.com/morluto/rea/blob/main/docs/recorded-crashes.md)
+for exact upstream profiles, bounds and verification coverage.
+
+## Offline ELF layout
+
+Use `inspect_binary_layout` with an explicit local ELF path for file-backed
+sections, symbols, relocations, linkage names, and static mitigation inferences
+without opening a disassembler target. When that complete record is already
+retained, call `inspect_analysis_view` for a summary, mitigations or linkage
+facet, one section or symbol, or a stable page. Do not re-run the decoder to
+read a single object.
+
+## Offline WASM
+
+Use `inspect_wasm_artifact` with caller-supplied WABT for selected local bytes.
+For counts, validation and WAT identity, select `detail: "summary"` on the first
+MCP call. The complete original Evidence stays retained; use
+`normalized_result.parent_evidence_id` for exact exports or text pages. Omitted
+or complete detail keeps the existing complete result.
+For a completed result, use `inspect_analysis_view` with its reported retained
+reference for a summary or `view: {kind: "wasm", facet: "exports", offset: 0, limit: 32}`.
+Facets also include sections, imports, candidates, glue, WAT, headers, details
+and tool profile. Text offsets count UTF-16 code units; follow `next_offset`.
+The complete source remains retained after an oversized MCP reply. No target
+execution or network acquisition is implied, and WAT is decoded representation.
+
+## Offline APK signatures
+
+Use `inspect_apk_signature` for a selected local APK/ZIP/AAB. Default MCP summaries
+retain complete Evidence. Select `view.collection: signers/digests/lineage`,
+with scheme or ID batches, fields and paging; use `inspect_analysis_view` kind
+`apk-signature` for retained reads after deletion. IDs retain artifact/scheme
+scope and signer links; `fields: []` keeps identity links. Empty pages preserve
+partial decoding reasons and unknown authenticity. CLI compact delivery needs
+`--evidence_output` to preserve the complete parent.
+It reads the APK
+Signing Block (v2/v3/v3.1) and v1 `META-INF` signing without executing anything,
+and reports each signer's certificate facts (for v1, the certificate the PKCS#7
+block's SignerInfo names), the declared v3 rotation lineage,
+the declared source-stamp certificate and, for SHA-256/SHA-512 digests, whether
+the declared content digest matches the current bytes. That match is not a
+signature verification: anyone who changes the bytes can recompute the digest.
+`posture` summarises v1-only signing (which cannot tell a v1-only APK from one
+whose v2/v3 block was removed), observed signer agreement across schemes,
+whether the v1 signer equals the block-scheme signer (`false` is notable),
+whether every differing signer appears in a declared (unverified) rotation
+lineage, and the strongest scheme.
+It never claims authenticity: no signature or lineage is cryptographically
+verified.
+
 ## Native targets
 
 After `open_binary`, use focused search, procedure, or function tools directly.
@@ -93,8 +325,7 @@ on the first MCP call. It retains the complete observation and returns the
 original selection, text availability and length without the body. Use
 `normalized_result.parent_evidence_id` with `inspect_analysis_view` and
 `view: {kind: "native", facet: "pseudocode", offset: 0, limit: 20000}`;
-follow `coverage.next_offset` for later pages. Choose a smaller limit if one
-page exceeds the client or transport budget. Offsets and limits count UTF-16
+follow `coverage.next_offset` for later pages. Offsets and limits count UTF-16
 code units, not lines or tokens. Pages reuse the same observation without
 repeating decompilation. Null and empty text remain distinct. Omitted or
 `complete` detail preserves full inline delivery. Summary delivery requires a
@@ -162,7 +393,7 @@ In ephemeral mode, choose a private absolute directory and set
 `REA_GHIDRA_CHECKPOINT_DIR` in the environment starting REA. Restart the MCP server
 after changing that launch configuration; no current tool call or runtime
 analysis-setting update enables it. Stock ELF/PE/Mach-O imports on Linux/macOS
-are supported; see the [checkpoint setup and limitations](https://github.com/morluto/rea/blob/main/docs/getting-started/installation.md#automatically-checkpoint-an-owned-ghidra-program).
+are supported; see the [checkpoint setup and limitations](https://github.com/morluto/rea/blob/main/docs/installation.md#automatically-checkpoint-an-owned-ghidra-program).
 
 With the setting enabled, normal opens restore compatible saved Programs
 automatically. Initial completed analysis is saved, and `close_binary` saves
@@ -183,7 +414,7 @@ import overrides and repair scripts are unavailable in this mode. Treat original
 analysis completeness/settings as unknown and prior edits as caller-project state.
 The program's recorded import digest must match the target; changed project content
 requires reopening for a fresh profile. See the
-[setup and preparation guide](https://github.com/morluto/rea/blob/main/docs/getting-started/installation.md#reuse-an-existing-ghidra-project).
+[setup and preparation guide](https://github.com/morluto/rea/blob/main/docs/installation.md#reuse-an-existing-ghidra-project).
 
 ## Ghidra startup deadline recovery
 
@@ -217,7 +448,7 @@ and memory controls in place. Disable specific expensive analyzers only when
 their missing coverage is acceptable and retain the resulting limitations.
 Exported C and embedded resources remain useful independent evidence, but a
 timeout does not establish complete analysis or absence of code. See the
-[deadline and client guide](https://github.com/morluto/rea/blob/main/docs/reference/mcp-contracts.md#ghidra-first-query-deadlines-and-recovery).
+[deadline and client guide](https://github.com/morluto/rea/blob/main/docs/mcp-contracts.md#ghidra-first-query-deadlines-and-recovery).
 
 ## Bridge request ceiling
 
@@ -368,32 +599,91 @@ broader metadata recovery on Linux; it requires an explicitly configured
 NativeAOT JAR. These are separate routes. The built-in parser also runs on
 Windows Ghidra P0; read frozen literals from its report, because
 `search_strings` does not include them. See the
-[NativeAOT guide](https://github.com/morluto/rea/blob/main/docs/providers/ghidra-nativeaot.md)
+[NativeAOT guide](https://github.com/morluto/rea/blob/main/docs/ghidra-nativeaot.md)
 for setup, supported layouts, and host restrictions. Preserve binary identity
 and distinguish derived metadata from Ghidra database observations. Recovered
 types and native pseudocode are not original C# source. Windows Ghidra P0 has
 no database mutation authority.
 
-For headerless firmware and address-bearing containers, read
-[raw images](firmware-and-raw-images.md#headerless-raw-images-and-firmware-containers).
+## Packages and extraction
 
-## DOS COM loader interpretation
+Use `inspect_artifact` for application bundles, archives, ZIP/APK/IPA/MSIX/AppX,
+ASAR, or DMG inputs when the artifact graph and findings help answer the
+question. It returns the complete artifact graph inline. Cite graph manifest
+IDs when using them.
+
+For an IPA or a macOS `.app`, ZIP, or DMG, pass the inventory Evidence to
+`project_apple_application_graph`. It reports application roots and nested
+bundles by path convention: app extensions, XPC services, frameworks, login
+items, system and driver extensions, and plug-ins. It also lists privileged
+helpers, launchd plists, symlinks, and each bundle's `info_plist_path` and
+executable candidates. Roles are path conventions, not parsed plists; read the
+listed plists with `inspect_plist`.
+
+After `open_binary` on a `.app` or Mach-O, use `trace_dylib_resolution` to see
+which file each `@rpath`, `@loader_path` and `@executable_path` load reaches for
+every executable in the bundle. It also lists missing or weak loads and earlier
+`@rpath` candidates that are absent. Narrow large bundles with `roots` or
+`architecture`. System paths stay undetermined because the dyld shared cache
+provides them.
+
+Use `extract_artifact` when materialized files from a supported format are needed.
+It extracts the active target and accepts optional `integrity_policy`; see the [MCP contracts](https://github.com/morluto/rea/blob/main/docs/mcp-contracts.md).
+It materializes all regular files into a fresh temporary directory chosen by
+REA. Symlinks and encrypted entries are inventory facts, not extractable files.
+The result reports the materialized directory; callers do not choose the
+destination. No separate permission grant is needed.
+
+For classic iNES cartridges, `open_binary` recognizes the byte signature without
+an executable architecture. `inspect_artifact` retains header facts and each
+PRG/CHR file unit's offset, length and SHA-256; its nested inventory's
+`ines.reconstruction` verifies the actual ordered region bytes against the
+whole-file digest. Extraction includes the original header, optional trainer
+and uninterpreted trailing bytes. These file units are not mapper/CPU bank
+maps. NES 2.0, UNIF, dirty legacy headers and truncated payloads are explicitly
+refused. No emulator or 6502 analysis is performed. See the
+[iNES guide](https://github.com/morluto/rea/blob/main/docs/ines-containers.md).
+
+Native DMG traversal automatically uses a read-only mount on supported macOS
+hosts, with an owned temporary mount directory and cleanup. It needs no approval
+flag. Unsupported hosts or mount failures remain explicit limitations; do not
+claim child inventory when only root identity is available. DMG extraction is
+unavailable through `extract_artifact`. To access DMG files on macOS, create a
+read-only mount with your own tools, select files from that mount for analysis,
+and detach the mount you created when finished. REA's inspection mount is
+temporary, not a retained export of the image's contents.
 
 For headerless DOS COM, explicitly open with `format: "dos-com"` (CLI
 `--target-format dos-com`). Inspect the load image before trusting function
 analysis: the entry is `0x10100`, file offset zero, with imposed real-mode segment
-context. PSP/stack/device state remains unmodeled. See [DOS guide](https://github.com/morluto/rea/blob/main/docs/providers/ghidra-dos.md).
+context. PSP/stack/device state remains unmodeled. See [DOS guide](https://github.com/morluto/rea/blob/main/docs/ghidra-dos.md).
 
-## Function annotations in Ghidra
+Use `inspect_byte_entropy` to triage high- and low-entropy ranges before extraction.
+
+For other headerless images (embedded firmware without ELF/Mach-O/PE/MZ
+headers), open with `format: "raw-binary"`, `architecture` (`x86`, `x86_64`,
+`arm`, `arm64`, `6502`, or `m68k`), and `entry_point` (`0x` hex). File offset 0 is mapped at
+that address. Hopper and IDA refuse this interpretation; Ghidra uses
+`BinaryLoader` with a generic language: big-endian for `m68k`, little-endian
+otherwise. Big-endian ARM, Thumb-only, and Cortex-M variants are unsupported.
+`6502` selects NMOS 6502; the entry and complete file mapping must fit within
+`0x0000..0xffff`. 65C02, 65816, cartridge containers, bank switching, and mapper
+semantics are unsupported. `m68k` requires an even entry and decodes the 68040
+superset of the 68000 family; Amiga/Atari containers and vector-table entry
+discovery are unsupported. Windows Ghidra P0 admits raw images only for `6502`. See [raw binary guide](https://github.com/morluto/rea/blob/main/docs/raw-binary.md).
+
+Intel HEX, S-record, UF2 and DfuSe files are containers, not raw images:
+`inspect_artifact` lists address regions (UF2 per familyID, DfuSe per element
+with its alternate setting), and `extract_artifact` writes each region. Open an
+extracted region as `raw-binary` with its start address as `entry_point`. UF2
+numbering gaps leave coverage unknown; a DfuSe suffix CRC mismatch follows
+`integrity_policy`. See [UF2 and DfuSe](https://github.com/morluto/rea/blob/main/docs/uf2-dfuse.md).
+
+### Function annotations in Ghidra
 
 Fresh-import sessions admit annotations; existing-project reuse is read-only.
 Use `annotate_native_function` for one function name and/or entry comments, with at least one explicit change. Review its annotation readback and refreshed dossier inline. Changes are atomic; empty comments clear them, omitted fields preserve them. Later MCP calls observe edits. Normal close saves them when owned Program checkpoint mode is enabled; ephemeral mode discards them. CLI `annotate-native-function` follows the same setting when closing after its updated result. Select the [checkpoint workflow](#continue-editable-ghidra-analysis-across-processes) before edits that must survive a later process. Original executable bytes are unchanged; edits invalidate immutable snapshots. Windows P0 does not admit database mutations. For naming only, `set_address_name` / `set_addresses_names` also work with Ghidra: they name function entries or data addresses (primary labels) and return compact per-address success booleans instead of a dossier. Ghidra rejects batch addresses that request the same name or a name another selected address holds; `raw_result.failures` gives each failure's reason.
 
-A provider switch or different target can retire the active Ghidra database and discard
-its edits, even if the new provider fails on a later call. Same-target,
-same-profile reopen keeps the active database. Retained annotation Evidence
-records what happened; it does not restore the edits.
-
 For `compare_functions`, obtain `analyze_function` Evidence before and after the
 edit while the MCP session is open; annotation Evidence is not a comparison
 input. Export the needed Evidence before close if comparison will happen later.
@@ -404,33 +694,139 @@ architecture, provider-owned mapping and selected-image commitments. Equal
 numeric addresses alone cannot establish correspondence; inspect retained
 source Evidence and coverage when the match remains ambiguous.
 
-## Other artifact guides
+## Offline PE resource inventory
 
-Read the owning page for offline formats, containers or firmware. These explicit
-anchors preserve older links without creating duplicate searchable sections.
+Use `inspect_pe_resources` with an absolute `path`, or
+`rea inspect-pe-resources ./selected.exe --json`, for portable PE32/PE32+
+resource inspection without opening a native target. Preserve returned Evidence:
+type/name/language IDs and UTF-16 names, original directory/data/payload ranges,
+code pages, payload hashes and static icon-group references. Same-language icon
+resolution is explicit; missing references and size mismatch remain visible.
+Other payloads are opaque, and this operation does not decode images or simulate
+Windows resource loading. Consult the budgets and supported tree profile in
+[offline binary diagnostics](https://github.com/morluto/rea/blob/main/docs/binary-diagnostics.md).
 
-- <a id="go-build-metadata"></a>[Go build metadata](format-inspectors.md#go-build-metadata)
-- <a id="model-files"></a>[Model files](format-inspectors.md#model-files)
-- <a id="il2cpp-metadata"></a>[IL2CPP metadata](format-inspectors.md#il2cpp-metadata)
-- <a id="rust-dependency-metadata"></a>[Rust dependency metadata](format-inspectors.md#rust-dependency-metadata)
-- <a id="pe-authenticode-certificate-tables"></a>[PE Authenticode certificate tables](format-inspectors.md#pe-authenticode-certificate-tables)
-- <a id="pe-import-and-delay-load-tables"></a>[PE import and delay-load tables](format-inspectors.md#pe-import-and-delay-load-tables)
-- <a id="pe-tls-callbacks-and-load-configuration"></a>[PE TLS callbacks and load configuration](format-inspectors.md#pe-tls-callbacks-and-load-configuration)
-- <a id="binary-hardening"></a>[Binary hardening](format-inspectors.md#binary-hardening)
-- <a id="elf-note-tables"></a>[ELF note tables](format-inspectors.md#elf-note-tables)
-- <a id="apple-ips-crash-reports"></a>[Apple IPS crash reports](format-inspectors.md#apple-ips-crash-reports)
-- <a id="linux-kernel-modules"></a>[Linux kernel modules](format-inspectors.md#linux-kernel-modules)
-- <a id="cpython-pyc-files"></a>[CPython pyc files](format-inspectors.md#cpython-pyc-files)
-- <a id="erlang-beam-files"></a>[Erlang BEAM files](format-inspectors.md#erlang-beam-files)
-- <a id="sqlite-snapshots"></a>[SQLite snapshots](format-inspectors.md#sqlite-snapshots)
-- <a id="recorded-linux-crashes"></a>[Recorded Linux crashes](format-inspectors.md#recorded-linux-crashes)
-- <a id="offline-elf-layout"></a>[Offline ELF layout](format-inspectors.md#offline-elf-layout)
-- <a id="offline-wasm"></a>[Offline WASM](format-inspectors.md#offline-wasm)
-- <a id="offline-apk-signatures"></a>[Offline APK signatures](format-inspectors.md#offline-apk-signatures)
-- <a id="packages-and-extraction"></a>[Packages and extraction](packages-and-archives.md#packages-and-extraction)
-- <a id="offline-pe-resource-inventory"></a>[Offline PE resource inventory](format-inspectors.md#offline-pe-resource-inventory)
-- <a id="offline-pe-and-elf-export-tables"></a>[Offline PE and ELF export tables](format-inspectors.md#offline-pe-and-elf-export-tables)
-- <a id="godot-pck"></a>[Godot PCK](packages-and-archives.md#godot-pck)
-- <a id="esp-images"></a>[ESP images](firmware-and-raw-images.md#esp-images)
-- <a id="esp-flash-images"></a>[ESP flash images](firmware-and-raw-images.md#esp-flash-images)
-- <a id="bun-standalone-executables"></a>[Bun standalone executables](packages-and-archives.md#bun-standalone-executables)
+## Offline PE and ELF export tables
+
+Use `inspect_native_exports` with an absolute `path`, or
+`rea inspect-native-exports ./libexample.so --json`, to read a PE export
+directory or ELF dynamic symbol table on any host without opening a native
+target. Ordinal-only, forwarded and hidden-version exports stay distinct;
+partial or unsupported coverage means the inventory is incomplete, not that
+exports are absent. Use `inspect_macho` for Mach-O. See
+[offline binary diagnostics](https://github.com/morluto/rea/blob/main/docs/binary-diagnostics.md).
+
+For exact core-module import/export differences, use `compare_wasm_interfaces`
+with two complete inspection Evidence records (or current-session retained
+references) and explicit scope. Preserve unknown types/duplicate names; static
+interface equality is not runtime compatibility. CLI accepts complete inline
+Evidence in `rea compare-wasm-interfaces input.json --json`, or exact references
+with `--evidence-bundle /absolute/path/evidence.json`. Use the complete parent
+ID when the inspection returned a summary.
+
+## Godot PCK
+
+For a standalone PCK, `open_binary` then `inspect_artifact` with
+`detail: "summary"` retains the complete static inventory. Use the returned
+`parent_evidence_id` with `inspect_analysis_view` inventory occurrences filtered
+by exact `logical_paths` or `occurrence_ids`, and join `artifact_id` to nodes
+filtered by `artifact_ids`. Select only needed fields; identity links remain.
+Prefer `inspect-artifact --detail summary --evidence_output PATH` for CLI tasks;
+the same CLI discovers embedded packs via their EOF trailer without opening a
+native analysis provider. Normal native opening remains unchanged.
+
+Distinguish declared MD5 from observed SHA-256 and graph/page completeness from
+`source_coverage`. Encrypted directories and sparse bundles have unknown entry
+coverage; encrypted members have unknown content identity. An empty filtered
+page cannot prove absence in unknown coverage. Retained views are historical,
+not fresh filesystem checks. No decryption, Godot resource decoding, GDScript
+decompilation or target execution is provided. See
+[Godot PCK](https://github.com/morluto/rea/blob/main/docs/godot-pck.md).
+
+UnityFS AssetBundle containers (`.bundle`, `.ab`, YooAsset packages and other
+byte-identified files) list `CAB-*` SerializedFiles and `.resS` members with
+header and node facts; none/LZ4/LZ4HC member blocks stream on demand. Bundles
+declaring asset-bundle encryption keep header facts with unknown directory
+coverage; LZMA member bytes retain named occurrences with unavailable hashes.
+Virtual member offsets are not physical carrier locations. Format 6–8 readers
+cache one decoded block and support retained filtered/paged views. No
+decryption or SerializedFile object decoding is provided. See
+[UnityFS](https://github.com/morluto/rea/blob/main/docs/unityfs.md).
+
+WeChat mini-program packages (`.wxapkg` files with `0xBE`/`0xED` marks) list
+members with declared names and absolute carrier offsets; member bytes are
+stored verbatim. `V1MMWX` PC-client packages report `encrypted` directory
+status with unknown coverage and are refused on extraction; no decryption is
+attempted. See
+[wxapkg](https://github.com/morluto/rea/blob/main/docs/wxapkg.md).
+
+U-Boot legacy uImages use the same inspection/extraction workflows. Prefer a
+retained summary and selected inventory views for header facts or component
+IDs. Header addresses/CPU/OS are declarations; payloads remain as stored.
+Multi-file components retain their aligned physical ranges; the full payload
+is also materialized. Unknown name text retains its original 32 bytes. See
+[U-Boot uImage](https://github.com/morluto/rea/blob/main/docs/uimage.md).
+
+## ESP images
+
+For an ESP32-family app or bootloader image, `open_binary` then
+`inspect_artifact` with `detail: "summary"`. `root_format_metadata` holds the
+observed `header` and `descriptor` (its `kind` is the app or bootloader role)
+and the derived `chip`, `checksum`, `appended_sha256` and
+`undescribed_trailing` ranges. Segment rows (`segment-NN.bin`) carry
+`load_addr`, `classification` (`mapped`, `loaded`, `not-loaded` or `unknown`,
+per ESP-IDF `should_map`/`should_load`; RAM ranges are not checked) and
+`source_location`; select them with `inspect_analysis_view` and
+`logical_paths`. Signature blocks are `unverified`; `public_key_sha256`
+matches eFuse key digests.
+
+Unknown `source_coverage` means truncation or undescribed trailing bytes, such
+as the flash segments of a `--ram-only-header` image; do not infer absence
+from it. Erased flash is described. Integrity mismatches are facts, not
+refusals. ESP8266 images are refused, and flash-encrypted images are not
+recognized. Segments are not disassembled, and RISC-V or Xtensa segments
+cannot be opened as raw-binary. See
+[ESP images](https://github.com/morluto/rea/blob/main/docs/esp-image.md).
+
+## ESP flash images
+
+A whole-flash dump opens as `esp-flash-image`. `root_format_metadata` holds
+`partition_table` (its `method`: `default`, `caller` or a derived
+`scan`), `bootloader` and `apps` ESP image facts, the `otadata` records,
+`partitions_outside_dump` and `boot_selection`. Every table has a
+`boot_selection`: its `basis` names the bootloader's branch (`no-otadata`
+without otadata, `none` when the bootloader rejects the table, `unknown`
+when a record is missing), and it lists its `assumptions`;
+`running_partition` is always `unknown`. Each image names its entry
+`path`. With `detail: "summary"` the root kind is `esp-flash-image-summary`
+and each image is a compact `summary` (chip, entry point, segment count,
+classified load ranges, signature block count, descriptor identity,
+integrity); complete detail keeps every segment. Partition rows
+(`partitions/<label>.bin`) carry the declared `type`, `subtype`, names,
+`flash_address`, `size` and flags; `encrypted` is a storage flag, not
+proof of ciphertext. `written_offset`/`written_end` bound the bytes that
+are not erased: an app slot whose facts say `erased` can still hold an older
+image, and a limitation says so. For a dump read from another flash address, call
+`open_binary` with `format: "esp-flash-image"` and `flash_offset`; an
+`esp-image` whose `flash_dump` is set names that offset in a next probe; a
+relocated table can be named with `partition_table_offset`. No table found
+means unknown, often flash encryption. Extraction writes `nvs_keys` as
+ordinary data. See
+[ESP flash images](https://github.com/morluto/rea/blob/main/docs/esp-flash-image.md).
+
+## Bun standalone executables
+
+A `bun build --compile` executable stores its module graph in Mach-O
+`__BUN,__bun`, a PE or ELF `.bun` section, or an appended trailer.
+`open_binary` then `inspect_artifact` reports root format `bun-standalone` with
+the carrier, structural layout, module count, entry point, raw flags and
+compile exec-argv; each module keeps its `/$bunfs/...` source name, loader,
+encoding, sizes and SHA-256, with sourcemap, bytecode and module-info regions as
+separate children. Use summary root metadata `entry_point_logical_path` as the
+exact inventory `logical_paths` selector, then read the selected content node by
+its artifact ID; the reader owns virtual-name normalization and indexed fallback. `extract-artifact` writes stored contents through the safe
+output tree; route extracted JavaScript to `analyze_javascript_application`.
+Layout labels describe record shapes, not a detected compiler version; unknown
+or ambiguous layouts are unsupported. Bytecode is retained, not decoded, and the
+executable is never run. See
+[Bun standalone executables](https://github.com/morluto/rea/blob/main/docs/bun-standalone.md).

.agents/skills/reverse-engineer-anything/references/packages-and-archives.md

@@ -1,117 +0,0 @@
-# Packages and archives
-
-Read the section matching the supplied artifact; other sections are optional.
-
-- [Packages and extraction](#packages-and-extraction)
-- [Godot PCK](#godot-pck)
-- [Bun standalone executables](#bun-standalone-executables)
-
-## Packages and extraction
-
-Use `inspect_artifact` for application bundles, archives, ZIP/APK/IPA/MSIX/AppX,
-ASAR, or DMG inputs when the artifact graph and findings help answer the
-question. It returns the complete artifact graph inline. Cite graph manifest
-IDs when using them.
-
-For an IPA or a macOS `.app`, ZIP, or DMG, pass the inventory Evidence to
-`project_apple_application_graph`. It reports application roots and nested
-bundles by path convention: app extensions, XPC services, frameworks, login
-items, system and driver extensions, and plug-ins. It also lists privileged
-helpers, launchd plists, symlinks, and each bundle's `info_plist_path` and
-executable candidates. Roles are path conventions, not parsed plists; read the
-listed plists with `inspect_plist`.
-
-After `open_binary` on a `.app` or Mach-O, use `trace_dylib_resolution` to see
-which file each `@rpath`, `@loader_path` and `@executable_path` load reaches for
-every executable in the bundle. It also lists missing or weak loads and earlier
-`@rpath` candidates that are absent. Narrow large bundles with `roots` or
-`architecture`. System paths stay undetermined because the dyld shared cache
-provides them.
-
-Use `extract_artifact` when materialized files from a supported format are needed.
-It extracts the active target and accepts optional `integrity_policy`; see the [MCP contracts](https://github.com/morluto/rea/blob/main/docs/reference/mcp-contracts.md).
-It materializes all regular files into a fresh temporary directory chosen by
-REA. Symlinks and encrypted entries are inventory facts, not extractable files.
-The result reports the materialized directory; callers do not choose the
-destination. No separate permission grant is needed.
-
-For classic iNES cartridges, `open_binary` recognizes the byte signature without
-an executable architecture. `inspect_artifact` retains header facts and each
-PRG/CHR file unit's offset, length and SHA-256; its nested inventory's
-`ines.reconstruction` verifies the actual ordered region bytes against the
-whole-file digest. Extraction includes the original header, optional trainer
-and uninterpreted trailing bytes. These file units are not mapper/CPU bank
-maps. NES 2.0, UNIF, dirty legacy headers and truncated payloads are explicitly
-refused. No emulator or 6502 analysis is performed. See the
-[iNES guide](https://github.com/morluto/rea/blob/main/docs/ines-containers.md).
-
-Native DMG traversal automatically uses a read-only mount on supported macOS
-hosts, with an owned temporary mount directory and cleanup. It needs no approval
-flag. Unsupported hosts or mount failures remain explicit limitations; do not
-claim child inventory when only root identity is available. DMG extraction is
-unavailable through `extract_artifact`. To access DMG files on macOS, create a
-read-only mount with your own tools, select files from that mount for analysis,
-and detach the mount you created when finished. REA's inspection mount is
-temporary, not a retained export of the image's contents.
-
-Use `inspect_byte_entropy` to triage high- and low-entropy ranges before extraction.
-
-## Godot PCK
-
-For a standalone PCK, `open_binary` then `inspect_artifact` with
-`detail: "summary"` retains the complete static inventory. Use the returned
-`parent_evidence_id` with `inspect_analysis_view` inventory occurrences filtered
-by exact `logical_paths` or `occurrence_ids`, and join `artifact_id` to nodes
-filtered by `artifact_ids`. Select only needed fields; identity links remain.
-Prefer `inspect-artifact --detail summary --evidence_output PATH` for CLI tasks;
-the same CLI discovers embedded packs via their EOF trailer without opening a
-native analysis provider. Normal native opening remains unchanged.
-
-Distinguish declared MD5 from observed SHA-256 and graph/page completeness from
-`source_coverage`. Encrypted directories and sparse bundles have unknown entry
-coverage; encrypted members have unknown content identity. An empty filtered
-page cannot prove absence in unknown coverage. Retained views are historical,
-not fresh filesystem checks. No decryption, Godot resource decoding, GDScript
-decompilation or target execution is provided. See
-[Godot PCK](https://github.com/morluto/rea/blob/main/docs/godot-pck.md).
-
-UnityFS AssetBundle containers (`.bundle`, `.ab`, YooAsset packages and other
-byte-identified files) list `CAB-*` SerializedFiles and `.resS` members with
-header and node facts; none/LZ4/LZ4HC member blocks stream on demand. Bundles
-declaring asset-bundle encryption keep header facts with unknown directory
-coverage; LZMA member bytes retain named occurrences with unavailable hashes.
-Virtual member offsets are not physical carrier locations. Format 6–8 readers
-cache one decoded block and support retained filtered/paged views. No
-decryption or SerializedFile object decoding is provided. See
-[UnityFS](https://github.com/morluto/rea/blob/main/docs/unityfs.md).
-
-WeChat mini-program packages (`.wxapkg` files with `0xBE`/`0xED` marks) list
-members with declared names and absolute carrier offsets; member bytes are
-stored verbatim. `V1MMWX` PC-client packages report `encrypted` directory
-status with unknown coverage and are refused on extraction; no decryption is
-attempted. See
-[wxapkg](https://github.com/morluto/rea/blob/main/docs/wxapkg.md).
-
-U-Boot legacy uImages use the same inspection/extraction workflows. Prefer a
-retained summary and selected inventory views for header facts or component
-IDs. Header addresses/CPU/OS are declarations; payloads remain as stored.
-Multi-file components retain their aligned physical ranges; the full payload
-is also materialized. Unknown name text retains its original 32 bytes. See
-[U-Boot uImage](https://github.com/morluto/rea/blob/main/docs/uimage.md).
-
-## Bun standalone executables
-
-A `bun build --compile` executable stores its module graph in Mach-O
-`__BUN,__bun`, a PE or ELF `.bun` section, or an appended trailer.
-`open_binary` then `inspect_artifact` reports root format `bun-standalone` with
-the carrier, structural layout, module count, entry point, raw flags and
-compile exec-argv; each module keeps its `/$bunfs/...` source name, loader,
-encoding, sizes and SHA-256, with sourcemap, bytecode and module-info regions as
-separate children. Use summary root metadata `entry_point_logical_path` as the
-exact inventory `logical_paths` selector, then read the selected content node by
-its artifact ID; the reader owns virtual-name normalization and indexed fallback. `extract-artifact` writes stored contents through the safe
-output tree; route extracted JavaScript to `analyze_javascript_application`.
-Layout labels describe record shapes, not a detected compiler version; unknown
-or ambiguous layouts are unsupported. Bytecode is retained, not decoded, and the
-executable is never run. See
-[Bun standalone executables](https://github.com/morluto/rea/blob/main/docs/bun-standalone.md).

.agents/skills/reverse-engineer-anything/references/runtime-observation.md

@@ -41,10 +41,10 @@ behavior unknown. Record truncation, unmatched breakpoints, changed target
 identity and cleanup uncertainty as limitations, rather than treating no retained
 event as proof that the behavior never occurs.
 
-Detailed contracts and prerequisites: [Frida](https://github.com/morluto/rea/blob/main/docs/guides/runtime/frida-instrumentation.md),
+Detailed contracts and prerequisites: [Frida](https://github.com/morluto/rea/blob/main/docs/frida-instrumentation.md),
 [GDB/Rizin/Cutter](https://github.com/morluto/rea/blob/main/docs/reverse-engineering-tools.md),
-[process capture](https://github.com/morluto/rea/blob/main/docs/guides/runtime/process-capture.md),
-and [native calls/UI](https://github.com/morluto/rea/blob/main/docs/guides/native/native-investigation.md#native-desktop-observation).
+[process capture](https://github.com/morluto/rea/blob/main/docs/process-capture.md),
+and [native calls/UI](https://github.com/morluto/rea/blob/main/docs/native-investigation.md#native-desktop-observation).
 
 ## Browser and Electron
 
@@ -130,5 +130,5 @@ Inspect native `.saz` snapshots with `inspect_web_network_capture` and
 traffic analysis, connect Everywhere's separate MCP server and use its
 advertised session tools with an explicit `sessionsSource` (`LiveTraffic` or
 `AgentCalls`). Preserve existing sessions and filters when inspecting a
-recorded run. See the [capture and MCP guide](https://github.com/morluto/rea/blob/main/docs/guides/web/web-network-captures.md)
+recorded run. See the [capture and MCP guide](https://github.com/morluto/rea/blob/main/docs/web-network-captures.md)
 for the workflow and Telerik's public setup and traffic-debugging skills.

.github/ISSUE_TEMPLATE/documentation.yml

@@ -27,7 +27,7 @@ body:
     attributes:
       label: Documentation location
       description: Link the page, section, command, API, skill, or inline comment.
-      placeholder: README.md#quick-start or docs/reference/mcp-contracts.md
+      placeholder: README.md#quick-start or docs/mcp-contracts.md
     validations:
       required: true
 

.github/pull_request_template.md

@@ -71,8 +71,8 @@ source, link, or rendered-document checks. -->
 - User-visible CLI/MCP output (if applicable):
 - Remaining proof gaps:
 
-For boundary fixes, identify the applicable [boundary regressions](https://github.com/morluto/rea/blob/main/docs/development/testing.md#boundary-regressions)
-and [lifecycle regressions](https://github.com/morluto/rea/blob/main/docs/development/testing.md#lifecycle-regressions)
+For boundary fixes, identify the applicable [boundary regressions](https://github.com/morluto/rea/blob/main/docs/testing.md#boundary-regressions)
+and [lifecycle regressions](https://github.com/morluto/rea/blob/main/docs/testing.md#lifecycle-regressions)
 covered by the evidence above, and explain relevant gaps.
 
 For evidence-bearing changes:
@@ -99,7 +99,7 @@ limits, security/privacy/containment implications, and meaningful proof gaps. --
   its new behavior and migration, and why compatibility/deprecation cannot
   preserve it. Every release increments minor, including breaking changes;
   keep breaking markers and migration notes so callers can assess compatibility.
-  See docs/development/releasing.md. -->
+  See docs/releasing.md. -->
 - Real Hopper/Ghidra, browser, or OS coverage:
 - Package or release metadata impact:
 - Security, privacy, process, or containment review:

.github/workflows/ci.yml

@@ -1016,8 +1016,8 @@ jobs:
         uses: ./.github/actions/npm-cache
       - run: npm ci
       - run: npm run docs:check
-      - name: Verify published routes, source links and local anchors
-        run: npm run verify:docs:routes
+      - name: Render documentation and validate page links
+        run: npm run docs:build
       - name: Generation leaves authored files unchanged
         run: git diff --exit-code
       - uses: actions/upload-artifact@ea165f8d65b6e75b540449e92b4886f43607fa02 # v4.6.2

.github/workflows/pages.yml

@@ -27,4 +27,4 @@ jobs:
         id: npm-cache
         uses: ./.github/actions/npm-cache
       - run: npm ci
-      - run: npm run verify:docs:routes
+      - run: npm run docs:build

AGENTS.md

@@ -14,13 +14,13 @@ Preserve caller-selected inputs and local evidence, including output, URLs, path
 
 ## Architecture and Cleanup
 
-Dependencies flow inward: domain semantics and contracts, provider adapters, shared application workflows, then CLI/MCP adapters. Keep engine protocols and provider-specific code out of domain/application layers. See [docs/architecture/architecture.mermaid](docs/architecture/architecture.mermaid) when changing composition.
+Dependencies flow inward: domain semantics and contracts, provider adapters, shared application workflows, then CLI/MCP adapters. Keep engine protocols and provider-specific code out of domain/application layers. See [docs/architecture.mermaid](docs/architecture.mermaid) when changing composition.
 
 Give each interpretation and resource a clear owner. Consumers must use that owner's parsed facts rather than reinterpret raw source. Preserve identity, omission, uncertainty, and source evidence across boundaries. Retain ownership of resources whose cleanup failed. Reuse `src/process/` supervision and identity primitives; a PID and executable path alone do not establish ownership after exit or reuse.
 
 Keep proof of ownership separate from validity, editability, and readiness. Malformed owned data may still be safely removable. Unresolved identity or applicability must remain unknown rather than be treated as absent, foreign, or aligned.
 
-For lifecycle changes, follow [ownership and completion invariants](docs/development/tool-design.md#own-the-lifecycle) and select the applicable [lifecycle regressions](docs/development/testing.md#lifecycle-regressions). Include late handshakes, cancellation during final cleanup, mixed child outcomes, and cleanup retry where those stages exist; active-execution cancellation alone does not cover finalization.
+For lifecycle changes, follow [ownership and completion invariants](docs/tool-design.md#own-the-lifecycle) and select the applicable [lifecycle regressions](docs/testing.md#lifecycle-regressions). Include late handshakes, cancellation during final cleanup, mixed child outcomes, and cleanup retry where those stages exist; active-execution cancellation alone does not cover finalization.
 
 Before adding complexity for a speculative or vanishingly unlikely race or security edge case, explain the concrete failure mode, likelihood, and complexity cost to the user and get their buy-in. Do not silently expand scope for theoretical robustness.
 
@@ -68,12 +68,6 @@ do not establish fewer tokens or faster analysis.
 
 ## Development
 
-Documentation ownership and authoring conventions live in
-[docs/development/documentation.md](docs/development/documentation.md). A feature
-uses `docs/specs/<domain>/<feature-slug>/spec.md`, one `plan.md` and `tasks.md`;
-individual architectural decisions use `docs/adr/<domain>/<decision-slug>.md`.
-Consult the [documentation directory](docs/README.md) before adding a guide.
-
 Use [.nvmrc](.nvmrc) and `package.json#packageManager` for the pinned toolchain. Cursor Cloud may place older Node.js first on `PATH`; environment setup installs the pinned toolchain under `/usr/local/bin`. Prefix `PATH="/usr/local/bin:$PATH"` before `node` and `npm`.
 
 - `npm ci`: install locked dependencies.
@@ -86,15 +80,15 @@ Use [.nvmrc](.nvmrc) and `package.json#packageManager` for the pinned toolchain.
 Use relevant checks for the change. The complete local gate, `npm run check:pr`, is optional for broad changes or CI diagnosis. See [CONTRIBUTING.md](CONTRIBUTING.md) for development, generated-file ownership, and release conventions.
 
 When changing installers or setup recovery, follow
-[Checking installers and publisher downloads](docs/development/testing.md#checking-installers-and-publisher-downloads).
+[Checking installers and publisher downloads](docs/testing.md#checking-installers-and-publisher-downloads).
 
-Coordinate expensive checks across agents. If a test unexpectedly consumes heavy CPU, stop its owned process family and profile a bounded representative case before retrying. Inspect production work, fixture generation, subprocesses, and repeated setup; preserve regression coverage when optimizing. Follow the [test resource guidance](docs/development/testing.md#developer-commands).
+Coordinate expensive checks across agents. If a test unexpectedly consumes heavy CPU, stop its owned process family and profile a bounded representative case before retrying. Inspect production work, fixture generation, subprocesses, and repeated setup; preserve regression coverage when optimizing. Follow the [test resource guidance](docs/testing.md#developer-commands).
 
 `docs/public/product-catalog.json`, `docs/verification/managed-conformance-*.json`, and `skills/` are ignored outputs. Edit source contracts and `.agents/skills/reverse-engineer-anything/`, then regenerate as needed. `.cache/mcp-tool-catalog.json` is test metadata; runtime builds and source checking do not consume it. Never commit binaries, provider project documents, credentials, `dist/`, `node_modules/`, or local planning artifacts.
 
 ## Tool and Test Changes
 
-For tool design, follow [docs/development/tool-design.md](docs/development/tool-design.md): start from the analyst question, reuse existing contracts, preserve caller choices, and return useful evidence inline. Limits must follow real format, protocol, authority, or resource constraints. Account for representation expansion before allocation; derive completeness from examined coverage.
+For tool design, follow [docs/tool-design.md](docs/tool-design.md): start from the analyst question, reuse existing contracts, preserve caller choices, and return useful evidence inline. Limits must follow real format, protocol, authority, or resource constraints. Account for representation expansion before allocation; derive completeness from examined coverage.
 
 For user- or agent-facing tool problems, prioritize fixing the owning behavior,
 contract, and actionable result or recovery at the point of use. Document the
@@ -102,7 +96,7 @@ result in product docs when explanation is needed. Add skill guidance only for
 workflow judgment or context that the tool cannot reasonably convey; do not use
 a skill as the primary repair for a discoverability or contract defect.
 
-For test changes or provider claims, use [docs/development/testing.md](docs/development/testing.md). Select applicable [boundary regressions](docs/development/testing.md#boundary-regressions) for parser, inventory, snapshot, and projection fixes. Prefer real public CLI/MCP workflows, then production-boundary integration, then producer goldens. Keep module tests for distinct semantics stronger workflows cannot reliably reproduce. Preserve malformed-input, cancellation, cleanup, permission, capacity, and target-identity coverage when pruning. Report unverified coverage explicitly; simulated providers do not establish real-provider behavior.
+For test changes or provider claims, use [docs/testing.md](docs/testing.md). Select applicable [boundary regressions](docs/testing.md#boundary-regressions) for parser, inventory, snapshot, and projection fixes. Prefer real public CLI/MCP workflows, then production-boundary integration, then producer goldens. Keep module tests for distinct semantics stronger workflows cannot reliably reproduce. Preserve malformed-input, cancellation, cleanup, permission, capacity, and target-identity coverage when pruning. Report unverified coverage explicitly; simulated providers do not establish real-provider behavior.
 
 Use Conventional Commit subjects and PR titles. Mark breaking changes with `!` or a `BREAKING CHANGE:` footer. Describe behavior changes, relevant validation, and real-provider verification scope.
 

CHANGELOG.md

@@ -132,8 +132,8 @@ Full contribution record: [4 commits and 1 merged PR](https://github.com/morluto
 - **Kuna analysis:** Use a caller-installed Kuna for procedure listings, pseudocode, assembly, call relationships, exact-address xrefs and cached string searches. Project exports retain source spans and digests; repeated requests reuse completed work. Recorded real-provider coverage uses Kuna 1.833 on Linux; Windows, PE and universal Mach-O are unsupported. See [the provider guide](docs/kuna-provider.md). ([#3832](https://github.com/morluto/rea/pull/3832), [#3854](https://github.com/morluto/rea/pull/3854), [#4071](https://github.com/morluto/rea/pull/4071), [#4095](https://github.com/morluto/rea/pull/4095)). Thanks @gensokyo-dev, @kaoru0822-kitauji, @N0zoM1z0.
 - **Retained JavaScript facts:** Query exact application paths, selected properties and filtered module references through `inspect_analysis_view`, with paging and complete row Evidence. These views reuse completed analysis and preserve source selection and unknown coverage. ([#4265](https://github.com/morluto/rea/pull/4265), [morluto/rea#4190](https://github.com/morluto/rea/issues/4190), [#4097](https://github.com/morluto/rea/pull/4097), [morluto/rea#4092](https://github.com/morluto/rea/issues/4092)). Thanks @kaoru0822-kitauji, @N0zoM1z0.
 - **APK locale tables:** Request several resource locales in one decode with repeatable CLI `--locales` or MCP `locales`. Each table reports its status and coverage; existing single-locale fields remain available. ([#4804](https://github.com/morluto/rea/pull/4804), [morluto/rea#4777](https://github.com/morluto/rea/issues/4777)). Thanks @abhay-2108, @N0zoM1z0.
-- **Windows ARM binaries:** Ghidra admits ARMNT/Thumb-2 and ARM64 PE applications and DLLs on the Windows x64 host lane. Recorded Ghidra 12.1.4 verification uses `WindowsResourceReference` disabled and raised startup budgets; default-analyzer completion, ARM64EC/ARM64X and Windows-on-Arm hosts remain unverified or unsupported. See [the exact scope](docs/providers/windows-ghidra-p0.md#native-authority-and-target-identity). ([#3965](https://github.com/morluto/rea/pull/3965), [morluto/rea#2186](https://github.com/morluto/rea/issues/2186)). Thanks @N0zoM1z0, @WestLabsAI.
-- **Raw m68k images:** Analyze explicitly selected big-endian m68k raw binaries using Ghidra’s fixed 68000 profile and a caller-supplied aligned entry. Real CLI/MCP verification used Ghidra 12.1.4 on macOS arm64; Linux is unverified and Windows P0 does not admit m68k. See [mapping requirements](docs/providers/raw-binary.md). ([#4018](https://github.com/morluto/rea/pull/4018)). Thanks @icedac.
+- **Windows ARM binaries:** Ghidra admits ARMNT/Thumb-2 and ARM64 PE applications and DLLs on the Windows x64 host lane. Recorded Ghidra 12.1.4 verification uses `WindowsResourceReference` disabled and raised startup budgets; default-analyzer completion, ARM64EC/ARM64X and Windows-on-Arm hosts remain unverified or unsupported. See [the exact scope](docs/windows-ghidra-p0.md#native-authority-and-target-identity). ([#3965](https://github.com/morluto/rea/pull/3965), [morluto/rea#2186](https://github.com/morluto/rea/issues/2186)). Thanks @N0zoM1z0, @WestLabsAI.
+- **Raw m68k images:** Analyze explicitly selected big-endian m68k raw binaries using Ghidra’s fixed 68000 profile and a caller-supplied aligned entry. Real CLI/MCP verification used Ghidra 12.1.4 on macOS arm64; Linux is unverified and Windows P0 does not admit m68k. See [mapping requirements](docs/raw-binary.md). ([#4018](https://github.com/morluto/rea/pull/4018)). Thanks @icedac.
 - **JADX deadlines:** Set `REA_JADX_OPERATION_TIMEOUT_MS` to extend APK loading and upstream operation deadlines together. Doctor reports the effective value and setup forwards an explicit selection. ([#4466](https://github.com/morluto/rea/pull/4466), [morluto/rea#3918](https://github.com/morluto/rea/issues/3918)). Thanks @jaychou813, @SandstromPL.
 - **Electron window options:** Resolve stable local constant `BrowserWindow` options while retaining source provenance. Relevant writes and escapes keep the result unknown. ([#4400](https://github.com/morluto/rea/pull/4400), [morluto/rea#4366](https://github.com/morluto/rea/issues/4366)). Thanks @kaoru0822-kitauji, @N0zoM1z0.
 - **Language editions:** Add the Greek website edition and Malayalam documentation, with Korean typography and translation corrections across the site. ([#3520](https://github.com/morluto/rea/pull/3520), [#4792](https://github.com/morluto/rea/pull/4792), [#3821](https://github.com/morluto/rea/pull/3821), [morluto/rea#3820](https://github.com/morluto/rea/issues/3820), [#3799](https://github.com/morluto/rea/pull/3799), [morluto/rea#3798](https://github.com/morluto/rea/issues/3798), [#4344](https://github.com/morluto/rea/pull/4344), [#3856](https://github.com/morluto/rea/pull/3856), [#4166](https://github.com/morluto/rea/pull/4166)). Thanks @gensokyo-dev, @hi2242, @kalayciburak, @kaoru0822-kitauji, @kraken-503, @kukinghan, @N0zoM1z0, @yeseong0412.
@@ -192,7 +192,7 @@ Full contribution record: [571 commits and 236 merged PRs](https://github.com/mo
 
 ## [6.5.0](https://github.com/morluto/rea/compare/rea-agents-6.4.0...rea-agents-6.5.0) (2026-10-13)
 
-Provider prerequisites and recorded verification scope are listed in [the testing guide](docs/development/testing.md).
+Provider prerequisites and recorded verification scope are listed in [the testing guide](docs/testing.md).
 
 ### Highlights
 
@@ -220,7 +220,7 @@ Provider prerequisites and recorded verification scope are listed in [the testin
 - **HarmonyOS packages:** inventory HAP/HSP/App Pack structures without executing code. The recorded real workflow covers one pinned HAP through repository-built CLI/MCP; installed-package and real HSP/App Pack coverage remain unverified. ([#1447](https://github.com/morluto/rea/pull/1447)). Thanks @BaaRai.
 - **Ghidra raw inputs and references:** compatible Linux/macOS Ghidra profiles accept caller-selected raw architecture/entry information and expose typed incoming references at exact addresses. Windows Ghidra P0 admits the raw NMOS 6502 profile described below; other raw targets and the incoming-reference facet remain outside Windows P0. ([#1868](https://github.com/morluto/rea/pull/1868), [issue morluto/rea#1836](https://github.com/morluto/rea/issues/1836), [#1715](https://github.com/morluto/rea/pull/1715), [issue morluto/rea#1245](https://github.com/morluto/rea/issues/1245)). Thanks @bugstan, @casesolved-co-uk, @mvanhorn, @N0zoM1z0.
 - **Ghidra MIPS:** Add bounded MIPS32r2/o32 relocatable objects, soft-float integer-register storage, admitted MIPS16 shared ELF, and a narrowly admitted recordless legacy MIPS32 executable profile. The latter pins an endian-matched 32-bit language and records inferred o32 as an analysis assumption. Admission follows each documented ABI/flag/relocation boundary. ([#1949](https://github.com/morluto/rea/pull/1949), [issue morluto/rea#1937](https://github.com/morluto/rea/issues/1937), [#1950](https://github.com/morluto/rea/pull/1950), [issue morluto/rea#1938](https://github.com/morluto/rea/issues/1938), [#1991](https://github.com/morluto/rea/pull/1991), [issue morluto/rea#1851](https://github.com/morluto/rea/issues/1851), [#1898](https://github.com/morluto/rea/pull/1898), [issue morluto/rea#1620](https://github.com/morluto/rea/issues/1620)). Thanks @AurelioB, @BaaRai, @bqw371, @kaoru0822-kitauji, @N0zoM1z0.
-- **Ghidra RISC-V:** admit little-endian RV32/RV64 `ET_EXEC` ELF declaring the supported double-float ABI. Relocatable/shared, big-endian and other ABI profiles remain refused; see [the profile and recorded lane](docs/providers/ghidra-riscv.md). ([#2151](https://github.com/morluto/rea/pull/2151)). Thanks @NIU-123370.
+- **Ghidra RISC-V:** admit little-endian RV32/RV64 `ET_EXEC` ELF declaring the supported double-float ABI. Relocatable/shared, big-endian and other ABI profiles remain refused; see [the profile and recorded lane](docs/ghidra-riscv.md). ([#2151](https://github.com/morluto/rea/pull/2151)). Thanks @NIU-123370.
 - **PSP static ELF profile:** the Ghidra profile is Linux x64, bounded little-endian ELF32 `ET_EXEC` with the documented PSP/ABI declarations and a compatible caller-installed Allegrex extension. PRX, shared/relocatable images, PBP/ISO/CSO and runtime emulation are outside scope. Historical extension experiments are separate from public-provider verification; real public Ghidra PSP coverage remains unverified. ([#1599](https://github.com/morluto/rea/pull/1599)). Thanks @jaelliot.
 - **Ghidra analysis settings:** apply validated analyzer overrides before analysis while retaining the selected analysis profile. ([#1913](https://github.com/morluto/rea/pull/1913)). Thanks @akushonkamen, @kaoru0822-kitauji, @N0zoM1z0.
 - **Attached native IDA MCP:** add an optional native bridge alongside existing legacy/headless profiles. Recorded native runs use Linux IDA Free 9.4 with a navigation correction and Windows IDA Pro 9.3 with a loopback-listener change; stock native switching, native macOS and Windows IDA Free remain unverified. Attached databases remain read-only and are never saved or closed. ([#1544](https://github.com/morluto/rea/pull/1544)). Thanks @imissapixel, @N0zoM1z0.
@@ -292,7 +292,7 @@ Provider prerequisites and recorded verification scope are listed in [the testin
 - **Source maps:** original-source and mapping rows preserve a null source name when unavailable. Handle null explicitly instead of expecting an invented unknown-source string; new index fields remain optional when reading older Evidence. ([ee50ed1](https://github.com/morluto/rea/commit/ee50ed121e38cc6e1a2ff0dc8b789f15f71c5402)).
 - **Streamed filtered JSON:** `--filter-output` now emits JSON `null` instead of `{}` when the selected value is null; consumers must distinguish a present null from a missing selection. Use `--full-output` when an object envelope is required. ([#2333](https://github.com/morluto/rea/pull/2333)). Thanks @Jackmeson1.
 - **Call graphs:** `get_call_graph.normalized_result` is now `{ graph, limitations }`; read traversal-depth groups under `graph` and retain relationship-specific caveats. Contract/fixture validation does not establish new Ghidra or IDA engine coverage. ([5dfb9d0](https://github.com/morluto/rea/commit/5dfb9d050c2cc44a61b183dae765bef4d22a53b7)).
-- **MCP discovery:** `binary_session` no longer repeats `server_identity.catalog.tools`. Use the connected server tool list, grouped `tool_availability` and provider capabilities; see [MCP contracts](docs/reference/mcp-contracts.md). Origin: [6395e8d](https://github.com/morluto/rea/commit/6395e8d3007d5ee453477460e7ee1c51cff76be0). ([#1988](https://github.com/morluto/rea/pull/1988)). Thanks @kaoru0822-kitauji, @N0zoM1z0.
+- **MCP discovery:** `binary_session` no longer repeats `server_identity.catalog.tools`. Use the connected server tool list, grouped `tool_availability` and provider capabilities; see [MCP contracts](docs/mcp-contracts.md). Origin: [6395e8d](https://github.com/morluto/rea/commit/6395e8d3007d5ee453477460e7ee1c51cff76be0). ([#1988](https://github.com/morluto/rea/pull/1988)). Thanks @kaoru0822-kitauji, @N0zoM1z0.
 
 - **Provider admission:** MIPS targets with unresolved GNU ABI attributes are refused. Supply supported ABI declarations. Saved Hopper databases on macOS are unavailable because the launcher cannot run the analysis bridge when opening a database; select an executable target instead. Database support requires a script-capable database launch route. ([d4bd65c](https://github.com/morluto/rea/commit/d4bd65c53c0254d0195cc7ab8da163dcadfd3b9b)).
 - **Segment extents:** `binary_overview` segment length may be null when Hopper coordinates cannot establish a finite extent in one address space. Preserve unknown rather than converting it to zero or a saturated value. ([36db19c](https://github.com/morluto/rea/commit/36db19c59)).
@@ -372,7 +372,7 @@ Full contribution record: [336 commits and 163 merged PRs](https://github.com/mo
 
 ### ⚠ BREAKING CHANGES
 
-* **captures:** Historical captures without current producer accounting or transaction identity, and web diffs missing accessibility or storage dimensions, are rejected. Preserve original captures and recapture with the current producer; update comparison consumers to include every dimension rather than synthesizing missing observations. See the [process capture guide](docs/guides/runtime/process-capture.md) and [browser scenario contract](docs/guides/web/browser-scenario-contract.md). ([3283a45](https://github.com/morluto/rea/commit/3283a45d09457c79e3adadb50a48620926d4bc5b))
+* **captures:** Historical captures without current producer accounting or transaction identity, and web diffs missing accessibility or storage dimensions, are rejected. Preserve original captures and recapture with the current producer; update comparison consumers to include every dimension rather than synthesizing missing observations. See the [process capture guide](docs/process-capture.md) and [browser scenario contract](docs/browser-scenario-contract.md). ([3283a45](https://github.com/morluto/rea/commit/3283a45d09457c79e3adadb50a48620926d4bc5b))
 * **browser:** JSON shape paths now contain typed property and array-element segments. WebMCP input_schema_shape is replaced by input_schema and input_schema_sha256, retaining declared examples and defaults.
 * **process:** Filesystem digest omission entries now require system_code; budget and changed-file omissions use null, and unavailable-file omissions preserve the operating-system error code.
 * **contracts:** Provider analysis outputs must explicitly supply metadata previously repaired with defaults; unsupported nullable facets must be reported as null.
@@ -540,7 +540,7 @@ Full contribution record: [336 commits and 163 merged PRs](https://github.com/mo
 
 ### ⚠ BREAKING CHANGES
 
-Read the [6.1 to 6.2 migration guide](docs/migrations/migration-6.2.md) before upgrading. REA's `always-bump-minor` policy includes breaking changes; 6.2 is not a backward-compatibility promise. Preserve original saved files and regenerate missing observations rather than fabricating identities or facts.
+Read the [6.1 to 6.2 migration guide](docs/migration-6.2.md) before upgrading. REA's `always-bump-minor` policy includes breaking changes; 6.2 is not a backward-compatibility promise. Preserve original saved files and regenerate missing observations rather than fabricating identities or facts.
 
 * **MCP / Evidence / snapshots / artifacts:** Success results are direct canonical Evidence; read `normalized_result` rather than the old `result`/`evidence` wrapper. Evidence requires nullable `analysis_profile`, session provider aliases are removed, snapshots require complete profile-bound query records, and artifact roles/permissions belong to occurrences. Recreate incompatible saved data; adding fields without recomputing their semantic identity is invalid. ([63bf914](https://github.com/morluto/rea/commit/63bf91405cf97b114a84f337fb1272d98a267999))
 * **Process captures:** Legacy v3 conversion is removed. Explicit executable identity and `event_journal` are required; retain old captures and recapture when current comparisons are needed instead of inventing launch identity or event order. ([2a77469](https://github.com/morluto/rea/commit/2a7746998d47446c4db6d4f524e0f183d6803f3f))

CONTRIBUTING.md

@@ -11,7 +11,7 @@ incorrect user instructions warrant standalone corrections. Collect other
 cosmetic-only suggestions in an issue rather than separate PRs.
 
 For selected architectural owners and dependency paths, use the
-[architecture map](docs/architecture/architecture.mermaid). It is not a complete directory or
+[architecture map](docs/architecture.mermaid). It is not a complete directory or
 import inventory. For current provider wiring, start with
 [`src/composition/binary.ts`](src/composition/binary.ts) for deep candidates and
 the other `src/composition/` factories for tool services, including
@@ -32,7 +32,7 @@ removing it. Preserve validation, lazy loading, caller policy, and resource
 acquisition and cleanup supplied by the old boundary. Published APIs, persisted
 formats, and independently versioned bridges require an explicit compatibility
 decision; an internal representation alone does not establish that obligation.
-See [interpreting boundary facts once](docs/development/tool-design.md#interpret-boundary-facts-once)
+See [interpreting boundary facts once](docs/tool-design.md#interpret-boundary-facts-once)
 for admission ownership and the distinction between repeated validation and
 independent checks.
 
@@ -44,7 +44,7 @@ Use the [analysis optimization skill](.agents/skills/rea-analysis-optimization/S
 to locate provider and shared-workflow bottlenecks, preserve Evidence, and
 compare equivalent real tasks before claiming an improvement.
 
-When adding or changing an MCP tool, follow the [tool design guide](docs/development/tool-design.md) and preserve the canonical contracts and generated catalog.
+When adding or changing an MCP tool, follow the [tool design guide](docs/tool-design.md) and preserve the canonical contracts and generated catalog.
 When adding or changing an admission ceiling, budget, or deadline, follow
 [analysis settings, limits, and recovery](docs/design/limits-and-recovery.md)
 for ownership, operation snapshots, provider integration, and the steps for
@@ -234,7 +234,7 @@ guarantee.
 Use the development toolchain pinned in `.nvmrc` and
 `package.json#packageManager`. Run `nvm use` before installing dependencies;
 installed-package runtime support is documented in
-[installation](docs/getting-started/installation.md#start-setup).
+[installation](docs/installation.md#start-setup).
 Use Node.js and npm for source builds and verifier scripts; the installed
 package's Bun runtime support does not extend to those development scripts.
 
@@ -289,20 +289,16 @@ base revision, or run the suite on Linux or WSL, before attributing them to a
 change. The embedded-artifact parent-swap tests exercise the selected-path
 replacement when the rename succeeds; if Windows refuses it while the admitted
 file is open, they instead verify the refusal and cleanup. See
-[testing](docs/development/testing.md#developer-commands) for command scopes
+[testing](docs/testing.md#developer-commands) for command scopes
 and lane selection.
 
 `git submodule update --init --recursive` fails at the pinned Unblob submodule
 on Windows and can leave later submodules unchecked out. Apply the
-[Unblob checkout workaround](docs/guides/firmware/firmware-analysis.md#windows-submodule-checkout),
+[Unblob checkout workaround](docs/firmware-analysis.md#windows-submodule-checkout),
 then rerun the command.
 
 ## Documentation website
 
-Use the [documentation directory](docs/README.md) and
-[authoring guide](docs/development/documentation.md) for document ownership,
-domain-based feature specifications and architectural decision records.
-
 The VitePress site uses the Markdown files in `docs/`. Run `npm run docs:dev`
 for live editing, `npm run docs:build` to check the production build and
 links, and `npm run docs:preview` to preview that build at `/rea/`.
@@ -356,7 +352,7 @@ npm run check:fast
 `test:local` runs source tests without building. `check:changed` combines cached
 static checks with source tests affected since the merge base with `origin/main`.
 Import-graph selection can miss runtime registration, bridges, and generated data;
-select relevant boundary tests explicitly. See [testing](docs/development/testing.md#developer-commands)
+select relevant boundary tests explicitly. See [testing](docs/testing.md#developer-commands)
 for commands, test placement, pruning, and real-provider prerequisites.
 
 Before requesting review, run relevant tests and `npm run check`; add
@@ -431,8 +427,8 @@ Run `npm run verify:hopper` on a supported macOS host or
 `npm run verify:hopper:linux` on the supported Linux demo runner. These build
 native fixtures and verify the installed engine through CLI/MCP; package or
 simulated-provider checks do not establish engine behavior. See
-[real-toolchain verification](docs/development/testing.md#end-to-end-integration-and-golden-evidence)
-for prerequisites and scope, and [Hopper setup](docs/getting-started/installation.md#hopper)
+[real-toolchain verification](docs/testing.md#end-to-end-integration-and-golden-evidence)
+for prerequisites and scope, and [Hopper setup](docs/installation.md#hopper)
 for supported hosts and unattended startup.
 
 Use the default `build/conformance/manifest.json` unless explicitly verifying
@@ -441,7 +437,7 @@ Generated fixtures and manifests remain ignored.
 
 ## Maintainer release checklist
 
-Use the [release guide](docs/development/releasing.md). Main pushes automatically refresh a
+Use the [release guide](docs/releasing.md). Main pushes automatically refresh a
 Release Please PR with the next version and changelog. Review its migration
 notes, wait for the current CI checks to pass, and merge it into main to publish.
 

README.md

@@ -10,7 +10,7 @@
 **See a feature you like. Understand how it works, down to the binary level.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](docs/reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](docs/mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#what-you-can-analyze)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](LICENSE)
@@ -72,7 +72,7 @@ Setup registers REA with your agent and installs matching workflow instructions.
 
 On Linux, Ghidra, JADX, firmware tool launches and static JavaScript/Electron
 analysis require a procps-compatible `ps` on REA's `PATH` for process ownership
-checks. Recovery steps are in `docs/getting-started/installation.md` under
+checks. Recovery steps are in `docs/installation.md` under
 "Linux owned-process prerequisite".
 
 ### Set up your agent
@@ -91,8 +91,8 @@ available. Run package acquisition from a trusted directory outside the target
 project. Installation and recovery details are in the setup guide below.
 
 Setup supports Claude Code, Codex, Cursor, Gemini CLI, Grok Build and
-[other agents](docs/getting-started/installation.md#supported-agents). See
-[installation and setup](docs/getting-started/installation.md) for provider configuration and
+[other agents](docs/installation.md#supported-agents). See
+[installation and setup](docs/installation.md) for provider configuration and
 manual MCP registration and Claude Code/Codex plugin installation.
 
 MCP uses compact input schemas by default to reduce context overhead. Set
@@ -135,7 +135,7 @@ rea --help
 ```
 
 For native analysis, configure a provider first. See the
-[CLI and Evidence guide](docs/getting-started/cli.md) for native commands, provider selection,
+[CLI and Evidence guide](docs/cli.md) for native commands, provider selection,
 snapshots and scripting.
 
 ### Update REA
@@ -191,45 +191,45 @@ CLI commands use the same workflows.
 REA requires Node.js 22.x (>=22.23.4), 24.x (>=24.22.1), or 26.12.1+, plus npm.
 Additional tools and host support depend on the target:
 
-| Target                  | What REA returns                                                                                  | Requirements and guide                                                                                                                                               |
-| ----------------------- | ------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Desktop installations   | Runtime candidates, supporting files, component markers and next probes                           | Built-in bounded directory/header inspection; [desktop applications](docs/desktop-applications.md)                                                                   |
-| Native binaries         | Pseudocode, assembly, strings, symbols, calls and references                                      | Hopper, Ghidra, IDA or Kuna; [native analysis](docs/guides/native/native-investigation.md)                                                                           |
-| Offline ELF layout      | Sections, segments, original symbols/relocations and static mitigation candidates                 | Caller-supplied pwntools on Linux x64; [binary diagnostics](docs/guides/native/binary-diagnostics.md)                                                                |
-| Go binaries             | Embedded compiler version, modules, replacements and build settings                               | Built-in static ELF/PE/thin Mach-O inspection; no Go installation required                                                                                           |
-| GPU code objects        | CUDA/HIP targets, selected kernel parameters and resources, retained PTX text                     | Built-in static ELF/PE/fatbin/CUBIN/PTX inspection; [GPU code objects](docs/gpu-code-objects.md)                                                                     |
-| Model artifacts         | GGUF / safetensors metadata, tensor declarations and derived totals                               | Built-in header inspection; optional full-file hash; [model files](docs/model-artifacts.md)                                                                          |
-| IL2CPP metadata         | Unity global-metadata.dat assembly images, type and method names and index ranges                 | Built-in static decoding of versions 24, 27, 29, 31 and 39; no Unity required                                                                                        |
-| Godot PCK               | Archive inventory and extraction, original header/directory facts and selected content identities | Built-in static formats 2, 3 and 4; no Godot required                                                                                                                |
-| Rust binaries           | Embedded cargo-auditable crate names, versions, sources and dependency edges                      | Built-in static ELF/PE/thin Mach-O inspection; [Rust binaries](docs/rust-binaries.md)                                                                                |
-| PE certificates         | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                      | Built-in static PE inspection; [PE certificates](docs/pe-certificates.md)                                                                                            |
-| PE imports              | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                        | Built-in static PE inspection; [PE imports](docs/pe-imports.md)                                                                                                      |
-| ELF notes               | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                   | Built-in static ELF inspection; [ELF notes](docs/elf-notes.md)                                                                                                       |
-| Binary hardening        | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                               | Built-in static header inspection; [binary hardening](docs/binary-hardening.md)                                                                                      |
-| Apple IPS crashes       | .ips metadata, threads, images, registers and documented crash classes                            | Built-in static JSON inspection; [Apple IPS](docs/apple-ips.md)                                                                                                      |
-| Linux kernel modules    | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                       | Built-in static ELF inspection; [kernel modules](docs/kernel-modules.md)                                                                                             |
-| Erlang BEAM             | IFF chunks, atoms, exports, imports, lambdas and the Code header                                  | Built-in static BEAM inspection; [Erlang BEAM](docs/erlang-beam.md)                                                                                                  |
-| WASM artifact           | Validation, sections, exact import/export WAT forms and decoded WAT                               | Caller-supplied WABT 1.0.42; `inspect_wasm_artifact`                                                                                                                 |
-| EVM bytecode            | Dispatch selectors, byte offsets, inferred arguments and mutability                               | Local raw/hex carrier on Linux x64; [offline EVM guide](docs/guides/evm/evm-bytecode.md)                                                                             |
-| SQLite databases        | Tables, columns, indexes, views, triggers and selected ordinary-table rows                        | Local database/WAL snapshot; Node.js 24.x >=24.15 or 26+ with native SQLite limits                                                                                   |
-| Recorded Linux crashes  | Raw notes, every recorded thread's registers/signals and optional mapping candidates              | Caller-supplied pwntools on Linux x64; optional GDB/pwndbg; [recorded crashes](docs/guides/native/recorded-crashes.md)                                               |
-| JavaScript / Electron   | Modules, imports, source maps, routes, IPC and native add-on relationships                        | Node.js and npm; Linux: procps-compatible `ps`; [application analysis](docs/guides/javascript/javascript-application-workflows.md)                                   |
-| Websites                | Page structure, scripts, network observations and requested screenshots                           | A Chrome-family browser; [browser analysis](docs/guides/web/browser-observation.md)                                                                                  |
-| Saved network captures  | Requests, responses, exposed payloads and source locations                                        | HAR or Fiddler Everywhere SAZ; mitmdump on Linux for native mitmproxy; [capture guide](docs/guides/web/web-network-captures.md)                                      |
-| .NET assemblies         | Metadata, CIL instructions, declared native dependencies and build comparisons                    | None (static only); [managed-code guide](docs/guides/managed/managed-code-analysis.md)                                                                               |
-| Android APKs            | Manifest declarations, classes, decompiled methods and references                                 | Headless JADX and a full JDK on Linux/macOS/Windows x64; [Android guide](docs/guides/android/android-analysis.md)                                                    |
-| APK signatures          | v1/v2/v3/v3.1 signers, certificate fingerprints, key rotation and digest self-consistency         | None (static only); `inspect_apk_signature`                                                                                                                          |
-| Android devices         | Devices, packages, processes, logs, dumps, screen captures, and APK/file transfers                | Caller-supplied adb (emulator or hardware); [ADB guide](docs/guides/android/adb-device-analysis.md)                                                                  |
-| JEB projects            | Engine-backed project units, artifact digests and type/method pseudo-code                         | A caller-started JEB client serving MCP, selected with REA_JEB_MCP_URL; [JEB guide](docs/providers/jeb-analysis.md)                                                  |
-| Android resources       | Decoded manifest, string tables, locales and version facts                                        | Caller-supplied Apktool launcher; [resource guide](docs/guides/android/apktool-resource-analysis.md)                                                                 |
-| Flutter apps            | Dart snapshot hash, per-ABI library digests and engine build provenance                           | None (static APK parsing); [Flutter guide](docs/guides/android/flutter-analysis.md)                                                                                  |
-| Firmware                | Regions, extraction results and native-analysis handoffs                                          | Binwalk / Unblob on Linux; [firmware guide](docs/guides/firmware/firmware-analysis.md)                                                                               |
-| Recorded packets        | Selected fields, repeated values, filters and decode-as rules                                     | Linux: TShark 4.x + prlimit; [capture guide](docs/guides/data/packet-captures.md)                                                                                    |
-| Packet summaries        | Endpoints, DNS, TLS SNI, protocol distribution and HTTP requests                                  | Caller-supplied tshark and capinfos (Linux-verified); [pcap guide](docs/guides/data/pcap-analysis.md)                                                                |
-| Recorded logic signals  | Decoder annotations, sample ranges and diagnostics                                                | Linux: sigrok-cli 0.7.2 + prlimit; [signal recordings](docs/guides/signals/signal-recordings.md)                                                                     |
-| Packages and resources  | File inventories, digests, plists, Apple bundle anatomy and extracted resources                   | [Artifact and JavaScript guide](docs/guides/javascript/javascript-artifact-reconstruction.md), [Apple applications](docs/guides/apple/apple-application-analysis.md) |
-| Process behavior        | Terminal output, interactions, exit and filesystem observations, and run comparisons              | Linux/macOS with a native PTY; [process capture](docs/guides/runtime/process-capture.md)                                                                             |
-| PyInstaller executables | CArchive members, Python version, entry scripts and extracted bytecode                            | None (static only); [Python packaged applications](docs/python-packaged-applications.md)                                                                             |
+| Target                  | What REA returns                                                                                  | Requirements and guide                                                                                                                |
+| ----------------------- | ------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------- |
+| Desktop installations   | Runtime candidates, supporting files, component markers and next probes                           | Built-in bounded directory/header inspection; [desktop applications](docs/desktop-applications.md)                                    |
+| Native binaries         | Pseudocode, assembly, strings, symbols, calls and references                                      | Hopper, Ghidra, IDA or Kuna; [native analysis](docs/native-investigation.md)                                                          |
+| Offline ELF layout      | Sections, segments, original symbols/relocations and static mitigation candidates                 | Caller-supplied pwntools on Linux x64; [binary diagnostics](docs/binary-diagnostics.md)                                               |
+| Go binaries             | Embedded compiler version, modules, replacements and build settings                               | Built-in static ELF/PE/thin Mach-O inspection; no Go installation required                                                            |
+| GPU code objects        | CUDA/HIP targets, selected kernel parameters and resources, retained PTX text                     | Built-in static ELF/PE/fatbin/CUBIN/PTX inspection; [GPU code objects](docs/gpu-code-objects.md)                                      |
+| Model artifacts         | GGUF / safetensors metadata, tensor declarations and derived totals                               | Built-in header inspection; optional full-file hash; [model files](docs/model-artifacts.md)                                           |
+| IL2CPP metadata         | Unity global-metadata.dat assembly images, type and method names and index ranges                 | Built-in static decoding of versions 24, 27, 29, 31 and 39; no Unity required                                                         |
+| Godot PCK               | Archive inventory and extraction, original header/directory facts and selected content identities | Built-in static formats 2, 3 and 4; no Godot required                                                                                 |
+| Rust binaries           | Embedded cargo-auditable crate names, versions, sources and dependency edges                      | Built-in static ELF/PE/thin Mach-O inspection; [Rust binaries](docs/rust-binaries.md)                                                 |
+| PE certificates         | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                      | Built-in static PE inspection; [PE certificates](docs/pe-certificates.md)                                                             |
+| PE imports              | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                        | Built-in static PE inspection; [PE imports](docs/pe-imports.md)                                                                       |
+| ELF notes               | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                   | Built-in static ELF inspection; [ELF notes](docs/elf-notes.md)                                                                        |
+| Binary hardening        | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                               | Built-in static header inspection; [binary hardening](docs/binary-hardening.md)                                                       |
+| Apple IPS crashes       | .ips metadata, threads, images, registers and documented crash classes                            | Built-in static JSON inspection; [Apple IPS](docs/apple-ips.md)                                                                       |
+| Linux kernel modules    | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                       | Built-in static ELF inspection; [kernel modules](docs/kernel-modules.md)                                                              |
+| Erlang BEAM             | IFF chunks, atoms, exports, imports, lambdas and the Code header                                  | Built-in static BEAM inspection; [Erlang BEAM](docs/erlang-beam.md)                                                                   |
+| WASM artifact           | Validation, sections, exact import/export WAT forms and decoded WAT                               | Caller-supplied WABT 1.0.42; `inspect_wasm_artifact`                                                                                  |
+| EVM bytecode            | Dispatch selectors, byte offsets, inferred arguments and mutability                               | Local raw/hex carrier on Linux x64; [offline EVM guide](docs/evm-bytecode.md)                                                         |
+| SQLite databases        | Tables, columns, indexes, views, triggers and selected ordinary-table rows                        | Local database/WAL snapshot; Node.js 24.x >=24.15 or 26+ with native SQLite limits                                                    |
+| Recorded Linux crashes  | Raw notes, every recorded thread's registers/signals and optional mapping candidates              | Caller-supplied pwntools on Linux x64; optional GDB/pwndbg; [recorded crashes](docs/recorded-crashes.md)                              |
+| JavaScript / Electron   | Modules, imports, source maps, routes, IPC and native add-on relationships                        | Node.js and npm; Linux: procps-compatible `ps`; [application analysis](docs/javascript-application-workflows.md)                      |
+| Websites                | Page structure, scripts, network observations and requested screenshots                           | A Chrome-family browser; [browser analysis](docs/browser-observation.md)                                                              |
+| Saved network captures  | Requests, responses, exposed payloads and source locations                                        | HAR or Fiddler Everywhere SAZ; mitmdump on Linux for native mitmproxy; [capture guide](docs/web-network-captures.md)                  |
+| .NET assemblies         | Metadata, CIL instructions, declared native dependencies and build comparisons                    | None (static only); [managed-code guide](docs/managed-code-analysis.md)                                                               |
+| Android APKs            | Manifest declarations, classes, decompiled methods and references                                 | Headless JADX and a full JDK on Linux/macOS/Windows x64; [Android guide](docs/android-analysis.md)                                    |
+| APK signatures          | v1/v2/v3/v3.1 signers, certificate fingerprints, key rotation and digest self-consistency         | None (static only); `inspect_apk_signature`                                                                                           |
+| Android devices         | Devices, packages, processes, logs, dumps, screen captures, and APK/file transfers                | Caller-supplied adb (emulator or hardware); [ADB guide](docs/adb-device-analysis.md)                                                  |
+| JEB projects            | Engine-backed project units, artifact digests and type/method pseudo-code                         | A caller-started JEB client serving MCP, selected with REA_JEB_MCP_URL; [JEB guide](docs/jeb-analysis.md)                             |
+| Android resources       | Decoded manifest, string tables, locales and version facts                                        | Caller-supplied Apktool launcher; [resource guide](docs/apktool-resource-analysis.md)                                                 |
+| Flutter apps            | Dart snapshot hash, per-ABI library digests and engine build provenance                           | None (static APK parsing); [Flutter guide](docs/flutter-analysis.md)                                                                  |
+| Firmware                | Regions, extraction results and native-analysis handoffs                                          | Binwalk / Unblob on Linux; [firmware guide](docs/firmware-analysis.md)                                                                |
+| Recorded packets        | Selected fields, repeated values, filters and decode-as rules                                     | Linux: TShark 4.x + prlimit; [capture guide](docs/packet-captures.md)                                                                 |
+| Packet summaries        | Endpoints, DNS, TLS SNI, protocol distribution and HTTP requests                                  | Caller-supplied tshark and capinfos (Linux-verified); [pcap guide](docs/pcap-analysis.md)                                             |
+| Recorded logic signals  | Decoder annotations, sample ranges and diagnostics                                                | Linux: sigrok-cli 0.7.2 + prlimit; [signal recordings](docs/signal-recordings.md)                                                     |
+| Packages and resources  | File inventories, digests, plists, Apple bundle anatomy and extracted resources                   | [Artifact and JavaScript guide](docs/javascript-artifact-reconstruction.md), [Apple applications](docs/apple-application-analysis.md) |
+| Process behavior        | Terminal output, interactions, exit and filesystem observations, and run comparisons              | Linux/macOS with a native PTY; [process capture](docs/process-capture.md)                                                             |
+| PyInstaller executables | CArchive members, Python version, entry scripts and extracted bytecode                            | None (static only); [Python packaged applications](docs/python-packaged-applications.md)                                              |
 
 Static JavaScript and .NET inspection read the supplied files without running
 the application. Runtime capture runs or interacts with the selected target
@@ -243,15 +243,15 @@ or update either provider.
 <a id="choosing-a-deep-analysis-provider"></a>
 
 Native formats and host support vary by provider. See
-[Hopper and Ghidra setup](docs/getting-started/installation.md#hopper), the
-[IDA guide](docs/providers/ida-provider.md) (including an optional native MCP bridge), the
+[Hopper and Ghidra setup](docs/installation.md#hopper), the
+[IDA guide](docs/ida-provider.md) (including an optional native MCP bridge), the
 [Kuna decompiler guide](docs/kuna-provider.md), and
-[experimental Windows Ghidra support](docs/providers/windows-ghidra-p0.md).
-Ghidra also supports [16-bit DOS analysis](docs/providers/ghidra-dos.md).
+[experimental Windows Ghidra support](docs/windows-ghidra-p0.md).
+Ghidra also supports [16-bit DOS analysis](docs/ghidra-dos.md).
 For large binaries, raise the provider's startup deadline with
 `REA_GHIDRA_STARTUP_TIMEOUT_MS` or `REA_HOPPER_STARTUP_TIMEOUT_MS`.
-For provider selection, see the [CLI guide](docs/getting-started/cli.md#choose-a-provider).
-Check [release availability](docs/getting-started/installation.md#released-package-and-main)
+For provider selection, see the [CLI guide](docs/cli.md#choose-a-provider).
+Check [release availability](docs/installation.md#released-package-and-main)
 for features added since the latest npm release.
 
 ## Showcases
@@ -341,8 +341,8 @@ REA exports a runnable environment with a basic test to check that it starts and
 <summary><strong>Which agents can use REA?</strong></summary>
 
 Any agent that supports local MCP servers. Setup configures the
-[supported agents](docs/getting-started/installation.md#supported-agents); other clients can use
-[manual MCP registration](docs/getting-started/installation.md#mcp-registry).
+[supported agents](docs/installation.md#supported-agents); other clients can use
+[manual MCP registration](docs/installation.md#mcp-registry).
 
 </details>
 
@@ -352,7 +352,7 @@ Any agent that supports local MCP servers. Setup configures the
 Deep native analysis uses Hopper, Ghidra, IDA or Kuna, depending on the target
 and operation. Static JavaScript and .NET inspection work without a native
 analysis engine. Setup can install Hopper after approval; Ghidra, IDA and Kuna
-use your existing installations. See [provider setup](docs/getting-started/installation.md#hopper)
+use your existing installations. See [provider setup](docs/installation.md#hopper)
 for the options and their supported targets.
 
 </details>
@@ -364,7 +364,7 @@ REA starts Hopper when an operation needs it. On macOS, a first-run dialog may
 ask you to choose demo mode or activate your license. Complete that prompt in the
 same user session before your first CLI/MCP operation or unattended job. Open
 Hopper manually if needed. See
-[Hopper startup and troubleshooting](docs/getting-started/installation.md#launcher-paths-and-troubleshooting).
+[Hopper startup and troubleshooting](docs/installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
@@ -373,7 +373,7 @@ Hopper manually if needed. See
 
 The skill supplies investigation instructions for your agent. Use `npx rea-agents setup`
 to register REA's MCP server and install the matching instructions, then restart
-your agent. See [skill-only installation](docs/getting-started/installation.md#skill-only-installation).
+your agent. See [skill-only installation](docs/installation.md#skill-only-installation).
 
 </details>
 
@@ -422,12 +422,12 @@ with your REA version, target type, steps to reproduce and error output.
 Start with the website's [worked guides](https://rea.tools/guides/).
 For exact options, prerequisites and result contracts:
 
-- [Installation and setup](docs/getting-started/installation.md): agent registration, provider configuration, updates and uninstall.
-- [Readiness and troubleshooting](docs/getting-started/installation.md#check-readiness-for-your-task): diagnose one agent or analysis engine.
-- [CLI and Evidence](docs/getting-started/cli.md): commands, provider selection, snapshots, import/export and exit statuses.
-- [MCP contracts](docs/reference/mcp-contracts.md) and [agent prompts](docs/getting-started/mcp-prompts.md): tool results, sessions and guided investigations.
-- [Tool catalog](docs/reference/mcp-contracts.md#generated-catalog): generated inventory of tools, providers and CLI commands.
-- [Roadmap](docs/development/roadmap.md): planned work and capability trackers.
+- [Installation and setup](docs/installation.md): agent registration, provider configuration, updates and uninstall.
+- [Readiness and troubleshooting](docs/installation.md#check-readiness-for-your-task): diagnose one agent or analysis engine.
+- [CLI and Evidence](docs/cli.md): commands, provider selection, snapshots, import/export and exit statuses.
+- [MCP contracts](docs/mcp-contracts.md) and [agent prompts](docs/mcp-prompts.md): tool results, sessions and guided investigations.
+- [Tool catalog](docs/mcp-contracts.md#generated-catalog): generated inventory of tools, providers and CLI commands.
+- [Roadmap](docs/roadmap.md): planned work and capability trackers.
 
 Report vulnerabilities through [SECURITY.md](SECURITY.md).
 
@@ -462,8 +462,8 @@ report a bug or suggest a feature, or [send a pull request](https://github.com/m
 to improve the code or docs.
 
 See [CONTRIBUTING.md](CONTRIBUTING.md) for development setup and checks,
-[testing](docs/development/testing.md) for verification lanes, and the
-[architecture map](docs/architecture/architecture.mermaid) for selected layers and dependency paths.
+[testing](docs/testing.md) for verification lanes, and the
+[architecture map](docs/architecture.mermaid) for selected layers and dependency paths.
 
 ## License
 

SECURITY.md

@@ -27,7 +27,7 @@ provider-dependent behavior to be reproduced safely.
 REA authenticates its Hopper and Ghidra bridges with per-session random
 capability tokens. POSIX uses current-user Unix sockets; Windows Ghidra uses
 authenticated loopback TCP with a private NTFS runtime whose DACL admits only
-the current user and SYSTEM. See [Windows Ghidra P0](docs/providers/windows-ghidra-p0.md#private-runtime-transport-and-lifecycle).
+the current user and SYSTEM. See [Windows Ghidra P0](docs/windows-ghidra-p0.md#private-runtime-transport-and-lifecycle).
 Tokens are transferred through private session descriptors rather than process
 arguments or environment variables.
 This is not a sandbox and does not protect against malicious processes already

THIRD_PARTY_NOTICES.md

@@ -54,27 +54,27 @@ REA's adapters do not grant, replace, or waive these licenses. The upstream
 executables and their dependency graphs are supplied separately. Git submodules
 pin inspection sources; they are not included in the npm package.
 
-| Project                        | License and source                                                                                                                                                                                                                                       | REA relationship                                                                                                                                                                                                                                                                                   |
-| ------------------------------ | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Ghidra                         | [Apache-2.0](https://github.com/NationalSecurityAgency/ghidra/blob/Ghidra_12.1.4_build/LICENSE), with the government-work and component qualifications in its [NOTICE](https://github.com/NationalSecurityAgency/ghidra/blob/Ghidra_12.1.4_build/NOTICE) | Bring your own Ghidra; see [supported versions](docs/getting-started/installation.md#ghidra). Copies of the 12.1.4 [LICENSE](licenses/ghidra-12.1.4-LICENSE.txt), [NOTICE](licenses/ghidra-12.1.4-NOTICE.txt), and [DISCLAIMER](licenses/ghidra-12.1.4-DISCLAIMER.txt) are retained for reference. |
-| ghidra-nativeaot               | [MIT](https://github.com/Washi1337/ghidra-nativeaot/blob/effeb734fc570c32650f88b159608979dc7b423e/LICENSE.md)                                                                                                                                            | Pinned inspection source; derived parser attribution above.                                                                                                                                                                                                                                        |
-| JADX                           | [Apache-2.0](https://github.com/skylot/jadx/blob/v1.5.6/LICENSE)                                                                                                                                                                                         | The audited jadx-headless-mcp source uses JADX 1.5.6 for Android decompilation; the engine JAR is separately supplied.                                                                                                                                                                             |
-| jadx-headless-mcp              | [Apache-2.0](https://github.com/1013503897/jadx-headless-mcp/blob/5844800a486d2248fa949b74c9896285f5b54de2/LICENSE)                                                                                                                                      | v0.7.1; pinned submodule and user-supplied JAR.                                                                                                                                                                                                                                                    |
-| Kuna                           | [Apache-2.0](https://github.com/Noelo-Lab/kuna/blob/v1.990/LICENSE), with its [NOTICE](https://github.com/Noelo-Lab/kuna/blob/v1.990/NOTICE)                                                                                                             | Bring your own `kuna`; REA verified 1.990 and never downloads, installs or bundles it. REA invokes it as a separate process.                                                                                                                                                                       |
-| Apktool                        | [Apache-2.0](https://github.com/iBotPeaches/Apktool/blob/master/LICENSE.md)                                                                                                                                                                              | User-supplied Android resource decoder.                                                                                                                                                                                                                                                            |
-| Binwalk                        | [MIT](https://github.com/ReFirmLabs/binwalk/blob/4fdab3d464d97b68e0af9088df3f9e2e1545b21c/LICENSE)                                                                                                                                                       | v3.1.0; pinned submodule and user-supplied firmware engine.                                                                                                                                                                                                                                        |
-| Unblob                         | [MIT](https://github.com/onekey-sec/unblob/blob/1fcc7a0a584a70a96c31f5a276c20944d199a089/LICENSE)                                                                                                                                                        | 26.6.4; pinned submodule and user-supplied firmware engine.                                                                                                                                                                                                                                        |
-| Wakaru                         | [Apache-2.0](https://github.com/pionxzh/wakaru/blob/8219bf5016a063d7fb215101a8c45d5959ec733f/LICENSE)                                                                                                                                                    | v1.14.0; pinned source and separately obtained JavaScript reconstruction tooling.                                                                                                                                                                                                                  |
-| WABT                           | [Apache-2.0](https://github.com/WebAssembly/wabt/blob/ff0ef7e0009402740c805a9744c09b05be063e48/LICENSE)                                                                                                                                                  | v1.0.42; external WebAssembly tools; [integration provenance](third_party/wabt/README.md).                                                                                                                                                                                                         |
-| pwntools                       | [MIT, with GPL/BSD component qualifications](https://github.com/Gallopsled/pwntools/blob/3ad86ec5adab1abf9781ca7552a6f5d7cff7a33c/LICENSE-pwntools.txt)                                                                                                  | 4.15.0; caller-supplied offline ELF analysis package.                                                                                                                                                                                                                                              |
-| pyelftools                     | [Public-domain dedication and component notices](https://github.com/eliben/pyelftools/blob/v0.33/LICENSE)                                                                                                                                                | 0.33; includes separately licensed bundled material, including Construct.                                                                                                                                                                                                                          |
-| Unicorn                        | [GPL-2.0 and component notices](https://github.com/unicorn-engine/unicorn/blob/2.1.2/COPYING)                                                                                                                                                            | 2.1.2; used by the caller-supplied ELF analysis profile for instruction emulation.                                                                                                                                                                                                                 |
-| pwndbg                         | [MIT](third_party/pwndbg/LICENSE.md)                                                                                                                                                                                                                     | 2026.09.15, commit `55596aa676a2756efb8d67034f31675170eabe48`; separately obtained debugger extension.                                                                                                                                                                                             |
-| GNU GDB                        | [GPL-3.0-or-later](https://sourceware.org/git/?p=binutils-gdb.git;a=blob;f=gdb/COPYING)                                                                                                                                                                  | Caller-supplied debugger for the optional pwndbg core-file workflow.                                                                                                                                                                                                                               |
-| LLDB / LLVM                    | [Apache-2.0 with LLVM exceptions](https://github.com/llvm/llvm-project/blob/main/LICENSE.TXT)                                                                                                                                                            | Caller-supplied debugger; the installed distribution's component and historical notices also apply.                                                                                                                                                                                                |
-| mitmproxy                      | [MIT](https://github.com/mitmproxy/mitmproxy/blob/6c09d56e4c29a92f5ad01b03199977584b8ea14f/LICENSE)                                                                                                                                                      | 12.2.3; separately supplied network capture proxy.                                                                                                                                                                                                                                                 |
-| Android Debug Bridge (adb)     | [Apache-2.0](https://android.googlesource.com/platform/packages/modules/adb/+/refs/heads/main/NOTICE)                                                                                                                                                    | User-supplied Android device tool. A complete Android SDK download has its own [SDK license terms](https://developer.android.com/studio/terms); adb's source license does not replace them.                                                                                                        |
-| ILSpy / ICSharpCode.Decompiler | [MIT](https://github.com/icsharpcode/ILSpy/blob/master/ICSharpCode.Decompiler/Properties/AssemblyInfo.cs)                                                                                                                                                | Optional separately installed .NET decompiler; not a redistributed REA dependency.                                                                                                                                                                                                                 |
+| Project                        | License and source                                                                                                                                                                                                                                       | REA relationship                                                                                                                                                                                                                                                                   |
+| ------------------------------ | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
+| Ghidra                         | [Apache-2.0](https://github.com/NationalSecurityAgency/ghidra/blob/Ghidra_12.1.4_build/LICENSE), with the government-work and component qualifications in its [NOTICE](https://github.com/NationalSecurityAgency/ghidra/blob/Ghidra_12.1.4_build/NOTICE) | Bring your own Ghidra; see [supported versions](docs/installation.md#ghidra). Copies of the 12.1.4 [LICENSE](licenses/ghidra-12.1.4-LICENSE.txt), [NOTICE](licenses/ghidra-12.1.4-NOTICE.txt), and [DISCLAIMER](licenses/ghidra-12.1.4-DISCLAIMER.txt) are retained for reference. |
+| ghidra-nativeaot               | [MIT](https://github.com/Washi1337/ghidra-nativeaot/blob/effeb734fc570c32650f88b159608979dc7b423e/LICENSE.md)                                                                                                                                            | Pinned inspection source; derived parser attribution above.                                                                                                                                                                                                                        |
+| JADX                           | [Apache-2.0](https://github.com/skylot/jadx/blob/v1.5.6/LICENSE)                                                                                                                                                                                         | The audited jadx-headless-mcp source uses JADX 1.5.6 for Android decompilation; the engine JAR is separately supplied.                                                                                                                                                             |
+| jadx-headless-mcp              | [Apache-2.0](https://github.com/1013503897/jadx-headless-mcp/blob/5844800a486d2248fa949b74c9896285f5b54de2/LICENSE)                                                                                                                                      | v0.7.1; pinned submodule and user-supplied JAR.                                                                                                                                                                                                                                    |
+| Kuna                           | [Apache-2.0](https://github.com/Noelo-Lab/kuna/blob/v1.990/LICENSE), with its [NOTICE](https://github.com/Noelo-Lab/kuna/blob/v1.990/NOTICE)                                                                                                             | Bring your own `kuna`; REA verified 1.990 and never downloads, installs or bundles it. REA invokes it as a separate process.                                                                                                                                                       |
+| Apktool                        | [Apache-2.0](https://github.com/iBotPeaches/Apktool/blob/master/LICENSE.md)                                                                                                                                                                              | User-supplied Android resource decoder.                                                                                                                                                                                                                                            |
+| Binwalk                        | [MIT](https://github.com/ReFirmLabs/binwalk/blob/4fdab3d464d97b68e0af9088df3f9e2e1545b21c/LICENSE)                                                                                                                                                       | v3.1.0; pinned submodule and user-supplied firmware engine.                                                                                                                                                                                                                        |
+| Unblob                         | [MIT](https://github.com/onekey-sec/unblob/blob/1fcc7a0a584a70a96c31f5a276c20944d199a089/LICENSE)                                                                                                                                                        | 26.6.4; pinned submodule and user-supplied firmware engine.                                                                                                                                                                                                                        |
+| Wakaru                         | [Apache-2.0](https://github.com/pionxzh/wakaru/blob/8219bf5016a063d7fb215101a8c45d5959ec733f/LICENSE)                                                                                                                                                    | v1.14.0; pinned source and separately obtained JavaScript reconstruction tooling.                                                                                                                                                                                                  |
+| WABT                           | [Apache-2.0](https://github.com/WebAssembly/wabt/blob/ff0ef7e0009402740c805a9744c09b05be063e48/LICENSE)                                                                                                                                                  | v1.0.42; external WebAssembly tools; [integration provenance](third_party/wabt/README.md).                                                                                                                                                                                         |
+| pwntools                       | [MIT, with GPL/BSD component qualifications](https://github.com/Gallopsled/pwntools/blob/3ad86ec5adab1abf9781ca7552a6f5d7cff7a33c/LICENSE-pwntools.txt)                                                                                                  | 4.15.0; caller-supplied offline ELF analysis package.                                                                                                                                                                                                                              |
+| pyelftools                     | [Public-domain dedication and component notices](https://github.com/eliben/pyelftools/blob/v0.33/LICENSE)                                                                                                                                                | 0.33; includes separately licensed bundled material, including Construct.                                                                                                                                                                                                          |
+| Unicorn                        | [GPL-2.0 and component notices](https://github.com/unicorn-engine/unicorn/blob/2.1.2/COPYING)                                                                                                                                                            | 2.1.2; used by the caller-supplied ELF analysis profile for instruction emulation.                                                                                                                                                                                                 |
+| pwndbg                         | [MIT](third_party/pwndbg/LICENSE.md)                                                                                                                                                                                                                     | 2026.09.15, commit `55596aa676a2756efb8d67034f31675170eabe48`; separately obtained debugger extension.                                                                                                                                                                             |
+| GNU GDB                        | [GPL-3.0-or-later](https://sourceware.org/git/?p=binutils-gdb.git;a=blob;f=gdb/COPYING)                                                                                                                                                                  | Caller-supplied debugger for the optional pwndbg core-file workflow.                                                                                                                                                                                                               |
+| LLDB / LLVM                    | [Apache-2.0 with LLVM exceptions](https://github.com/llvm/llvm-project/blob/main/LICENSE.TXT)                                                                                                                                                            | Caller-supplied debugger; the installed distribution's component and historical notices also apply.                                                                                                                                                                                |
+| mitmproxy                      | [MIT](https://github.com/mitmproxy/mitmproxy/blob/6c09d56e4c29a92f5ad01b03199977584b8ea14f/LICENSE)                                                                                                                                                      | 12.2.3; separately supplied network capture proxy.                                                                                                                                                                                                                                 |
+| Android Debug Bridge (adb)     | [Apache-2.0](https://android.googlesource.com/platform/packages/modules/adb/+/refs/heads/main/NOTICE)                                                                                                                                                    | User-supplied Android device tool. A complete Android SDK download has its own [SDK license terms](https://developer.android.com/studio/terms); adb's source license does not replace them.                                                                                        |
+| ILSpy / ICSharpCode.Decompiler | [MIT](https://github.com/icsharpcode/ILSpy/blob/master/ICSharpCode.Decompiler/Properties/AssemblyInfo.cs)                                                                                                                                                | Optional separately installed .NET decompiler; not a redistributed REA dependency.                                                                                                                                                                                                 |
 
 Ghidra's original notice credits software developed at the National Security
 Agency. It explains that US-government-created portions are not subject to US

bridge/ghidra/ReaGhidraBridge.java

@@ -179,7 +179,6 @@ public final class ReaGhidraBridge extends HeadlessScript {
     private List<FunctionEntry> procedureInventory;
     private List<InventoryItem> stringInventory;
     private DecompInterface decompiler;
-    private boolean existingProject;
     // A refused Program may only report its admission failure to the client.
     private String identityAdmissionFailure;
     /** Per-function native decompiler limit from the session; 0 leaves it unbounded. */
@@ -200,7 +199,6 @@ public final class ReaGhidraBridge extends HeadlessScript {
         Path descriptorPath = Path.of(arguments[0]);
         checkpointDirectory = descriptorPath.toAbsolutePath().normalize().getParent();
         SessionDescriptor descriptor = readDescriptor(descriptorPath);
-        existingProject = descriptor.existingProject;
         decompileTimeoutSeconds = descriptor.decompileTimeoutSeconds();
         // Windows retains a native immutable bearer descriptor lease until
         // runtime_close; POSIX removes it after this read. Normal cleanup removes
@@ -878,7 +876,6 @@ public final class ReaGhidraBridge extends HeadlessScript {
         JsonArray blocks = new JsonArray();
         JsonArray skipped = new JsonArray();
         JsonArray notLoaded = new JsonArray();
-        JsonArray overlays = new JsonArray();
         List<ByteSearchBlock> eligible = new ArrayList<>();
         for (MemoryBlock block : ordered) {
             monitor.checkCancelled();
@@ -886,16 +883,10 @@ public final class ReaGhidraBridge extends HeadlessScript {
             Address high = block.getEnd();
             Address bound = start == null ? end : start;
             if (bound != null && !bound.getAddressSpace().equals(low.getAddressSpace())) continue;
-            // Without bounds, search loaded non-overlay memory. Unloaded file
-            // parts and loaded overlays stay reachable through explicit bounds.
-            if (bound == null && !block.isLoaded()) {
+            if (bound == null && (!block.isLoaded() || block.isOverlay())) {
                 notLoaded.add(byteSearchCoverage(block, low, high));
                 continue;
             }
-            if (bound == null && block.isOverlay()) {
-                overlays.add(byteSearchCoverage(block, low, high));
-                continue;
-            }
             if (start != null && low.compareTo(start) < 0) low = start;
             if (end != null && high.compareTo(end) > 0) high = end;
             if (low.compareTo(high) > 0) continue;
@@ -969,7 +960,6 @@ public final class ReaGhidraBridge extends HeadlessScript {
         searched.addProperty("bytes", covered);
         searched.add("skipped_uninitialized", skipped);
         searched.add("skipped_not_loaded", notLoaded);
-        searched.add("skipped_overlays", overlays);
         JsonObject result = new JsonObject();
         result.add("matches", matches);
         result.add("searched", searched);
@@ -1424,29 +1414,8 @@ public final class ReaGhidraBridge extends HeadlessScript {
         flow.addProperty("conditional", false);
         flow.addProperty("computed", false);
         if (instruction == null) {
-            Instruction containing = currentProgram.getListing().getInstructionContaining(address);
-            boolean inMemory = currentProgram.getMemory().contains(address);
-            Data containingData = inMemory && containing == null
-                ? currentProgram.getListing().getDefinedDataContaining(address) : null;
-            result.addProperty("status", !inMemory ? "outside-memory" : containing != null
-                ? "not-instruction-boundary" : containingData != null ? "data" : "not-in-listing");
-            if (inMemory && containing == null && containingData != null) {
-                JsonObject parentData = new JsonObject();
-                parentData.addProperty("address", canonicalAddress(containingData.getAddress()));
-                parentData.addProperty("length", containingData.getLength());
-                parentData.addProperty("type_id", containingData.getDataType().getPathName());
-                parentData.addProperty("provenance", "ghidra-listing");
-                result.add("containing_data", parentData);
-            }
-            if (containing != null && currentProgram.getMemory().contains(address)) {
-                JsonObject containingInstruction = new JsonObject();
-                containingInstruction.addProperty("address", canonicalAddress(containing.getAddress()));
-                containingInstruction.addProperty("length", containing.getLength());
-                containingInstruction.addProperty("mnemonic", containing.getMnemonicString());
-                containingInstruction.addProperty("raw_disassembly", containing.toString());
-                containingInstruction.addProperty("provenance", "ghidra-listing");
-                result.add("containing_instruction", containingInstruction);
-            }
+            result.addProperty("status", !currentProgram.getMemory().contains(address) ? "outside-memory" : currentProgram.getListing().getInstructionContaining(address) != null
+                ? "not-instruction-boundary" : currentProgram.getListing().getDefinedDataContaining(address) != null ? "data" : "not-in-listing");
             for (String key : List.of("bytes", "length", "mnemonic", "raw_disassembly")) result.add(key, JsonNull.INSTANCE);
         } else {
             result.addProperty("status", "decoded");
@@ -2407,7 +2376,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
                 if (!match.matched()) {
                     continue;
                 }
-                JsonObject item = resultItem(entry.item, "procedure");
+                JsonObject item = resultItem(entry.item, null);
                 if (!match.aliases().isEmpty()) {
                     JsonArray aliases = new JsonArray();
                     for (String alias : match.aliases()) aliases.add(alias);
@@ -2422,7 +2391,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
             if (!matcher.matches(item.value)) {
                 continue;
             }
-            items.add(resultItem(item, procedureSearch ? "procedure" : "string"));
+            items.add(resultItem(item, null));
         }
         return items;
     }
@@ -3747,7 +3716,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
         return result;
     }
 
-    private JsonObject callRelationshipCoverage(
+    private static JsonObject callRelationshipCoverage(
             CallBoundaryObservation calls, Integer missingCallers) {
         JsonObject coverage = completeResolvedCallCoverage();
         Integer omitted = calls == null ? null : calls.unrepresentedCalleeCalls();
@@ -3764,7 +3733,7 @@ public final class ReaGhidraBridge extends HeadlessScript {
             if (calls == null && missingCallers == null) directions.add("callers");
             directions.add("callees");
             coverage.add("limited_directions", directions);
-            return qualifyProjectCallCoverage(coverage, calls, missingCallers);
+            return coverage;
         }
         JsonArray limitations = new JsonArray();
         if (callerLimitation != null) limitations.add(callerLimitation);
@@ -3778,35 +3747,6 @@ public final class ReaGhidraBridge extends HeadlessScript {
             coverage.add("limitations", limitations);
             coverage.add("limited_directions", directions);
         }
-        return qualifyProjectCallCoverage(coverage, calls, missingCallers);
-    }
-
-    private JsonObject qualifyProjectCallCoverage(
-            JsonObject coverage, CallBoundaryObservation calls, Integer missingCallers) {
-        if (!existingProject) return coverage;
-        String reason = "The selected project's prior analysis completeness is unknown; " +
-            "the recorded call relationships may omit undiscovered callers or callees.";
-        String status = coverage.get("status").getAsString();
-        // A single-direction read with known omissions is still partial; an
-        // unknown project history adds a limitation rather than erasing them.
-        if (status.equals("partial") && (calls == null || missingCallers == null)) {
-            coverage.getAsJsonArray("limitations").add(reason);
-            return coverage;
-        }
-        if (status.equals("unknown")) reason += " " + coverage.get("reason").getAsString();
-        if (status.equals("partial")) {
-            for (JsonElement limitation : coverage.getAsJsonArray("limitations"))
-                reason += " " + limitation.getAsString();
-        }
-        JsonArray directions = new JsonArray();
-        if (missingCallers != null || (calls == null && missingCallers == null))
-            directions.add("callers");
-        if (calls != null || (calls == null && missingCallers == null))
-            directions.add("callees");
-        coverage.addProperty("status", "unknown");
-        coverage.addProperty("reason", reason);
-        coverage.remove("limitations");
-        coverage.add("limited_directions", directions);
         return coverage;
     }
 

bridge/ghidra/ReaGhidraRiscvCallingConvention.java

@@ -37,7 +37,7 @@ import org.xml.sax.InputSource;
 /**
  * Apply the committed RISC-V calling-convention policy after analysis. Ghidra's generic RV32
  * compiler specification models ilp32d. Each policy derives a program-specific prototype from the
- * program's own default prototype, as its {@link Policy} row and docs/providers/ghidra-riscv.md state. The
+ * program's own default prototype, as its {@link Policy} row and docs/ghidra-riscv.md state. The
  * script installs the prototype as a specification extension and assigns it, with dynamic
  * storage, to every non-thunk function, external function and function definition.
  */

bridge/native/rea_lldb_tracer.py

@@ -243,20 +243,6 @@ def _hex(value):
     return "0x%x" % value
 
 
-def _source_location(address):
-    """Preserve available line-entry facets without acquiring source files."""
-    entry = address.GetLineEntry()
-    if not entry.IsValid():
-        return None
-    file_spec = entry.GetFileSpec()
-    file_path = str(file_spec) if file_spec.IsValid() else None
-    line = entry.GetLine() or None
-    column = entry.GetColumn() or None
-    if not file_path and line is None and column is None:
-        return None
-    return {"file_path": file_path or None, "line": line, "column": column}
-
-
 def _location(address, target):
     """Load and file address, module and symbol of one code address."""
     module = address.GetModule()
@@ -270,7 +256,6 @@ def _location(address, target):
         "module": module.GetFileSpec().GetFilename() if module.IsValid() else None,
         "module_path": str(module.GetFileSpec()) if module.IsValid() else None,
         "symbol": symbol.GetName() if symbol.IsValid() else None,
-        "source_location": _source_location(address),
     }
     return location
 

bridge/native/test_rea_lldb_tracer.py

@@ -25,45 +25,6 @@ spec.loader.exec_module(tracer)
 
 
 class NativeTraceBudgetTests(unittest.TestCase):
-    def test_source_coordinates_preserve_partial_metadata_without_reading_source(self):
-        def address(valid=True, file_valid=True, line=23, column=7):
-            class SourceFileSpec:
-                def IsValid(self):
-                    return file_valid
-
-                def __str__(self):
-                    return "/missing/é space/fixture.pas"
-
-            file_spec = SourceFileSpec()
-            entry = types.SimpleNamespace(
-                IsValid=lambda: valid,
-                GetFileSpec=lambda: file_spec,
-                GetLine=lambda: line,
-                GetColumn=lambda: column,
-            )
-            return types.SimpleNamespace(GetLineEntry=lambda: entry)
-
-        self.assertEqual(
-            tracer._source_location(address()),
-            {"file_path": "/missing/é space/fixture.pas", "line": 23, "column": 7},
-        )
-        self.assertEqual(
-            tracer._source_location(address(column=0)),
-            {"file_path": "/missing/é space/fixture.pas", "line": 23, "column": None},
-        )
-        self.assertEqual(
-            tracer._source_location(address(file_valid=False)),
-            {"file_path": None, "line": 23, "column": 7},
-        )
-        self.assertEqual(
-            tracer._source_location(address(line=0)),
-            {"file_path": "/missing/é space/fixture.pas", "line": None, "column": 7},
-        )
-        self.assertIsNone(tracer._source_location(address(valid=False)))
-        self.assertIsNone(
-            tracer._source_location(address(file_valid=False, line=0, column=0))
-        )
-
     def test_invalid_launch_process_reports_explicit_no_creation(self):
         class InvalidProcess:
             def IsValid(self):
@@ -429,9 +390,6 @@ class NativeTraceBudgetTests(unittest.TestCase):
                 return FileSpec()
 
         class Address:
-            def GetLineEntry(self):
-                return types.SimpleNamespace(IsValid=lambda: False)
-
             def GetModule(self):
                 return Module()
 
@@ -533,24 +491,7 @@ class NativeTraceBudgetTests(unittest.TestCase):
             def GetFileSpec(self):
                 return FileSpec()
 
-        class SourceFileSpec:
-            def IsValid(self):
-                return True
-
-            def __str__(self):
-                return source_path
-
         class Address:
-            def GetLineEntry(self):
-                if source_path is None:
-                    return types.SimpleNamespace(IsValid=lambda: False)
-                return types.SimpleNamespace(
-                    IsValid=lambda: True,
-                    GetFileSpec=SourceFileSpec,
-                    GetLine=lambda: 15,
-                    GetColumn=lambda: 3,
-                )
-
             def GetModule(self):
                 return Module()
 
@@ -577,35 +518,19 @@ class NativeTraceBudgetTests(unittest.TestCase):
         breakpoint_count = 1000
         created = [[Breakpoint()] for _ in range(breakpoint_count)]
         config = {"breakpoints": [{"kind": "objc-method"}] * breakpoint_count}
-        for source_path in (None, "/tmp/" + "源🚀" * 3000 + "/calls.pas"):
-            with self.subTest(source_path_present=source_path is not None):
-                report, locations_truncated = tracer._breakpoint_report(
-                    object(), created, config
-                )
-                retained_bytes = sum(
-                    len(json.dumps(location).encode("utf-8"))
-                    + (1 if index > 0 else 0)
-                    for row in report
-                    for index, location in enumerate(row["locations"])
-                )
-                self.assertTrue(locations_truncated)
-                self.assertEqual(
-                    sum(row["location_count"] for row in report), 64_000
-                )
-                self.assertLess(
-                    sum(len(row["locations"]) for row in report), 64_000
-                )
-                self.assertLessEqual(
-                    retained_bytes, tracer.MAX_BREAKPOINT_LOCATION_BYTES
-                )
-                if source_path is not None:
-                    self.assertTrue(
-                        any(
-                            location["source_location"]["file_path"] == source_path
-                            for row in report
-                            for location in row["locations"]
-                        )
-                    )
+        report, locations_truncated = tracer._breakpoint_report(
+            object(), created, config
+        )
+        retained_bytes = sum(
+            len(json.dumps(location).encode("utf-8"))
+            + (1 if index > 0 else 0)
+            for row in report
+            for index, location in enumerate(row["locations"])
+        )
+        self.assertTrue(locations_truncated)
+        self.assertEqual(sum(row["location_count"] for row in report), 64_000)
+        self.assertLess(sum(len(row["locations"]) for row in report), 64_000)
+        self.assertLessEqual(retained_bytes, tracer.MAX_BREAKPOINT_LOCATION_BYTES)
 
 
 if __name__ == "__main__":

bridge/pwndbg/test_core_context.py

@@ -109,7 +109,7 @@ class CoreContextTests(unittest.TestCase):
         self.assertFalse(result["ok"])
         self.assertEqual(result["reason"], "output-limit")
         self.assertNotIn("exceeds64", result["message"])
-        self.assertIn("64 MiB", result["message"])
+        self.assertEqual(result["message"], "Complete debugger context exceeds the 64 MiB reply budget.")
         self.assertEqual(reads, [])
         self.assertEqual(queries, ["maps"])
 

docs/.vitepress/config.ts

@@ -1,18 +1,4 @@
 import { defineConfig } from "vitepress";
-import { dirname, relative, resolve, sep } from "node:path";
-import { fileURLToPath } from "node:url";
-import {
-  documentationRewrites,
-  documentationSections,
-} from "./documentation.js";
-
-const documentationRoot = fileURLToPath(new URL("..", import.meta.url));
-const rewrites: Record<string, string> = {
-  ...documentationRewrites,
-  "README.md": "documentation.md",
-  "specs/README.md": "specs/index.md",
-  "adr/README.md": "adr/index.md",
-};
 
 export default defineConfig({
   title: "REA",
@@ -20,92 +6,135 @@ export default defineConfig({
     "Reverse engineer binaries, applications, and runtime behavior with one CLI and MCP server.",
   lang: "en-US",
   base: "/rea/",
-  rewrites,
-  markdown: {
-    config(md) {
-      // Repository links resolve from their physical source. Render them from
-      // the stable public route instead, including links across categories.
-      md.core.ruler.after("inline", "documentation-source-links", (state) => {
-        const physicalPath =
-          state.env.realPath ??
-          (state.env.relativePath
-            ? resolve(documentationRoot, state.env.relativePath)
-            : null);
-        if (physicalPath === null) return;
-        const renderedPath =
-          state.env.path ??
-          resolve(
-            documentationRoot,
-            rewrites[state.env.relativePath] ?? state.env.relativePath,
-          );
-        for (const block of state.tokens) {
-          for (const token of block.children ?? []) {
-            const attribute =
-              token.type === "link_open"
-                ? "href"
-                : token.type === "image"
-                  ? "src"
-                  : null;
-            if (attribute === null) continue;
-            const destination = token.attrGet(attribute);
-            if (
-              !destination ||
-              /^(?:[a-z][a-z\d+.-]*:|[/#])/iu.test(destination)
-            )
-              continue;
-            const separator = destination.search(/[?#]/u);
-            const path =
-              separator === -1 ? destination : destination.slice(0, separator);
-            const suffix = separator === -1 ? "" : destination.slice(separator);
-            const source = relative(
-              documentationRoot,
-              resolve(dirname(physicalPath), path),
-            )
-              .split(sep)
-              .join("/");
-            const rendered = relative(
-              dirname(renderedPath),
-              resolve(
-                documentationRoot,
-                source.startsWith("public/")
-                  ? source.slice("public/".length)
-                  : (rewrites[source] ?? source),
-              ),
-            )
-              .split(sep)
-              .join("/");
-            token.attrSet(attribute, rendered + suffix);
-          }
-        }
-      });
-    },
-  },
   srcExclude: ["readme/**"],
   themeConfig: {
     nav: [
       { text: "Get started", link: "/installation" },
-      { text: "Documentation", link: "/documentation" },
       { text: "Reference", link: "/mcp-contracts" },
       { text: "Roadmap", link: "/roadmap" },
     ],
     sidebar: [
       {
-        text: "Documentation directory",
+        text: "Getting started",
         items: [
-          { text: "All guides", link: "/documentation" },
-          { text: "Authoring conventions", link: "/development/documentation" },
-          { text: "Feature specifications", link: "/specs/" },
-          { text: "Architecture decisions", link: "/adr/" },
+          { text: "Installation and setup", link: "/installation" },
+          { text: "Client configuration", link: "/client-configuration" },
+          { text: "CLI and Evidence", link: "/cli" },
+          { text: "Agent prompts", link: "/mcp-prompts" },
+          { text: "Roadmap", link: "/roadmap" },
+        ],
+      },
+      {
+        text: "Investigation guides",
+        items: [
+          { text: "Native binaries", link: "/native-investigation" },
+          { text: "Go build metadata", link: "/go-binaries" },
+          { text: "IL2CPP metadata", link: "/il2cpp-metadata" },
+          { text: "Model artifacts", link: "/model-artifacts" },
+          { text: "Rust dependencies", link: "/rust-binaries" },
+          { text: "PE certificates", link: "/pe-certificates" },
+          { text: "PE imports", link: "/pe-imports" },
+          { text: "PE TLS/load config", link: "/pe-load-config" },
+          { text: "ELF notes", link: "/elf-notes" },
+          { text: "Binary hardening", link: "/binary-hardening" },
+          { text: "Apple IPS crash reports", link: "/apple-ips" },
+          { text: "Linux kernel modules", link: "/kernel-modules" },
+          { text: "CPython pyc files", link: "/python-pyc" },
+          { text: "Erlang BEAM", link: "/erlang-beam" },
+          {
+            text: "JavaScript and Electron",
+            link: "/javascript-artifact-reconstruction",
+          },
+          {
+            text: "JavaScript workflows",
+            link: "/javascript-application-workflows",
+          },
+          { text: "Browser observation", link: "/browser-observation" },
+          {
+            text: "Web network captures",
+            link: "/web-network-captures",
+          },
+          {
+            text: "Build RL environments",
+            link: "/agent-environments-quickstart",
+          },
+          { text: "Environment reference", link: "/agent-environments" },
+          { text: "Electron observation", link: "/electron-observation" },
+          { text: "Electron fuses", link: "/electron-fuses" },
+          { text: "Process capture", link: "/process-capture" },
+          {
+            text: "Desktop application capture",
+            link: "/desktop-application-capture",
+          },
+          {
+            text: "Desktop application state",
+            link: "/desktop-application-state",
+          },
+          {
+            text: "Desktop application export",
+            link: "/desktop-application-export",
+          },
+          {
+            text: "Desktop application tasks",
+            link: "/desktop-application-tasks",
+          },
+          {
+            text: "Desktop build computer",
+            link: "/desktop-build-computer",
+          },
+          {
+            text: "Building and witnessing",
+            link: "/desktop-build-witness",
+          },
+          { text: ".NET assemblies", link: "/managed-code-analysis" },
+          {
+            text: "Python packaged applications",
+            link: "/python-packaged-applications",
+          },
+          { text: "Android applications", link: "/android-analysis" },
+          { text: "Apple applications", link: "/apple-application-analysis" },
+          { text: "Desktop installations", link: "/desktop-applications" },
+          { text: "Firmware", link: "/firmware-analysis" },
+          { text: "iNES containers", link: "/ines-containers" },
+          { text: "SQLite databases", link: "/sqlite-databases" },
+          { text: "Packet captures", link: "/packet-captures" },
+          { text: "Signal recordings", link: "/signal-recordings" },
+        ],
+      },
+      {
+        text: "Provider guides",
+        collapsed: true,
+        items: [
+          { text: "IDA", link: "/ida-provider" },
+          { text: "Kuna", link: "/kuna-provider" },
+          { text: "Ghidra on Windows", link: "/windows-ghidra-p0" },
+          { text: "Ghidra DOS analysis", link: "/ghidra-dos" },
+          { text: "Ghidra raw binary", link: "/raw-binary" },
+          { text: "Ghidra NativeAOT", link: "/ghidra-nativeaot" },
+          { text: "Ghidra PowerPC", link: "/ghidra-ppc" },
+          { text: "Ghidra GameCube DOL", link: "/ghidra-dol" },
+          { text: "Ghidra semantics", link: "/ghidra-provider" },
+        ],
+      },
+      {
+        text: "Reference and development",
+        collapsed: true,
+        items: [
+          { text: "MCP contracts", link: "/mcp-contracts" },
+          { text: "Tool design", link: "/tool-design" },
+          {
+            text: "Admission limits and recovery",
+            link: "/design/limits-and-recovery",
+          },
+          { text: "Testing", link: "/testing" },
+          { text: "Client verification", link: "/client-verification" },
+          {
+            text: "Reconstruction readiness",
+            link: "/reconstruction-readiness",
+          },
+          { text: "Releasing", link: "/releasing" },
         ],
       },
-      ...documentationSections.map((section) => ({
-        text: section.text,
-        collapsed: section.text !== "Getting started",
-        items: section.items.map((item) => ({
-          text: item.text,
-          link: item.route,
-        })),
-      })),
     ],
     search: { provider: "local" },
     socialLinks: [

docs/.vitepress/documentation.ts

@@ -1,654 +0,0 @@
-// Authored guide ownership: physical sources and stable public routes.
-export const documentationSections = [
-  {
-    text: "Getting started",
-    items: [
-      {
-        text: "Installation and setup",
-        source: "getting-started/installation.md",
-        route: "/installation",
-      },
-      {
-        text: "Client configuration and troubleshooting",
-        source: "getting-started/client-configuration.md",
-        route: "/client-configuration",
-      },
-      {
-        text: "CLI and Evidence",
-        source: "getting-started/cli.md",
-        route: "/cli",
-      },
-      {
-        text: "Guided MCP prompts and completion",
-        source: "getting-started/mcp-prompts.md",
-        route: "/mcp-prompts",
-      },
-    ],
-  },
-  {
-    text: "Native binaries",
-    items: [
-      {
-        text: "Native binary investigation",
-        source: "guides/native/native-investigation.md",
-        route: "/native-investigation",
-      },
-      {
-        text: "Go binary build metadata",
-        source: "guides/native/go-binaries.md",
-        route: "/go-binaries",
-      },
-      {
-        text: "Offline binary diagnostics",
-        source: "guides/native/binary-diagnostics.md",
-        route: "/binary-diagnostics",
-      },
-      {
-        text: "Recorded crash evidence",
-        source: "guides/native/recorded-crashes.md",
-        route: "/recorded-crashes",
-      },
-    ],
-  },
-  {
-    text: "JavaScript and Electron",
-    items: [
-      {
-        text: "JavaScript Application Graph",
-        source: "guides/javascript/javascript-application-graph.md",
-        route: "/javascript-application-graph",
-      },
-      {
-        text: "Cross-layer JavaScript application workflows",
-        source: "guides/javascript/javascript-application-workflows.md",
-        route: "/javascript-application-workflows",
-      },
-      {
-        text: "JavaScript artifact reconstruction",
-        source: "guides/javascript/javascript-artifact-reconstruction.md",
-        route: "/javascript-artifact-reconstruction",
-      },
-      {
-        text: "JavaScript source recovery",
-        source: "guides/javascript/javascript-recovery.md",
-        route: "/javascript-recovery",
-      },
-      {
-        text: "Passive Node and Electron runtime observation",
-        source: "guides/javascript/javascript-runtime-observation.md",
-        route: "/javascript-runtime-observation",
-      },
-      {
-        text: "JavaScript static/runtime reconciliation",
-        source: "guides/javascript/javascript-runtime-reconciliation.md",
-        route: "/javascript-runtime-reconciliation",
-      },
-      {
-        text: "Electron file-page observation",
-        source: "guides/javascript/electron-observation.md",
-        route: "/electron-observation",
-      },
-    ],
-  },
-  {
-    text: "Browser and captured websites",
-    items: [
-      {
-        text: "Website observation with CDP",
-        source: "guides/web/browser-observation.md",
-        route: "/browser-observation",
-      },
-      {
-        text: "Browser scenario contract",
-        source: "guides/web/browser-scenario-contract.md",
-        route: "/browser-scenario-contract",
-      },
-      {
-        text: "Website runtime source attribution",
-        source: "guides/web/web-runtime.md",
-        route: "/web-runtime",
-      },
-      {
-        text: "Historical web network captures",
-        source: "guides/web/web-network-captures.md",
-        route: "/web-network-captures",
-      },
-      {
-        text: "HTTP/3 capture lab",
-        source: "http3-capture-lab.md",
-        route: "/http3-capture-lab",
-      },
-      {
-        text: "Captured website source locations",
-        source: "guides/web/web-source-location.md",
-        route: "/web-source-location",
-      },
-      {
-        text: "Captured website module relationships",
-        source: "guides/web/website-module-trace.md",
-        route: "/website-module-trace",
-      },
-      {
-        text: "Captured website scripts and static JavaScript analysis",
-        source: "guides/web/website-script-export.md",
-        route: "/website-script-export",
-      },
-    ],
-  },
-  {
-    text: "Android applications",
-    items: [
-      {
-        text: "Static Android APK analysis",
-        source: "guides/android/android-analysis.md",
-        route: "/android-analysis",
-      },
-      {
-        text: "Apktool resource decoding",
-        source: "guides/android/apktool-resource-analysis.md",
-        route: "/apktool-resource-analysis",
-      },
-      {
-        text: "ADB device inspection and acquisition",
-        source: "guides/android/adb-device-analysis.md",
-        route: "/adb-device-analysis",
-      },
-      {
-        text: "Flutter build identification",
-        source: "guides/android/flutter-analysis.md",
-        route: "/flutter-analysis",
-      },
-    ],
-  },
-  {
-    text: "Apple applications",
-    items: [
-      {
-        text: "Apple Application Inventory Projection",
-        source: "guides/apple/apple-application-analysis.md",
-        route: "/apple-application-analysis",
-      },
-    ],
-  },
-  {
-    text: ".NET assemblies",
-    items: [
-      {
-        text: "Managed-code analysis",
-        source: "guides/managed/managed-code-analysis.md",
-        route: "/managed-code-analysis",
-      },
-    ],
-  },
-  {
-    text: "Firmware",
-    items: [
-      {
-        text: "Firmware analysis",
-        source: "guides/firmware/firmware-analysis.md",
-        route: "/firmware-analysis",
-      },
-    ],
-  },
-  {
-    text: "HarmonyOS packages",
-    items: [
-      {
-        text: "Static HarmonyOS package inventory",
-        source: "guides/harmony/harmony-analysis.md",
-        route: "/harmony-analysis",
-      },
-    ],
-  },
-  {
-    text: "WebAssembly",
-    items: [
-      {
-        text: "Offline WebAssembly artifacts",
-        source: "guides/wasm/wasm-artifacts.md",
-        route: "/wasm-artifacts",
-      },
-    ],
-  },
-  {
-    text: "EVM contracts",
-    items: [
-      {
-        text: "Offline EVM bytecode",
-        source: "guides/evm/evm-bytecode.md",
-        route: "/evm-bytecode",
-      },
-    ],
-  },
-  {
-    text: "Databases and recorded packets",
-    items: [
-      {
-        text: "SQLite database snapshots",
-        source: "guides/data/sqlite-databases.md",
-        route: "/sqlite-databases",
-      },
-      {
-        text: "Recorded packet capture inspection",
-        source: "guides/data/packet-captures.md",
-        route: "/packet-captures",
-      },
-      {
-        text: "Packet capture summaries",
-        source: "guides/data/pcap-analysis.md",
-        route: "/pcap-analysis",
-      },
-    ],
-  },
-  {
-    text: "Process capture and instrumentation",
-    items: [
-      {
-        text: "Process capture",
-        source: "guides/runtime/process-capture.md",
-        route: "/process-capture",
-      },
-      {
-        text: "Frida instrumentation",
-        source: "guides/runtime/frida-instrumentation.md",
-        route: "/frida-instrumentation",
-      },
-    ],
-  },
-  {
-    text: "Provider setup and formats",
-    items: [
-      {
-        text: "Ghidra provider semantics",
-        source: "providers/ghidra-provider.md",
-        route: "/ghidra-provider",
-      },
-      {
-        text: "DOS MZ and COM analysis with Ghidra",
-        source: "providers/ghidra-dos.md",
-        route: "/ghidra-dos",
-      },
-      {
-        text: "Optional NativeAOT metadata recovery",
-        source: "providers/ghidra-nativeaot.md",
-        route: "/ghidra-nativeaot",
-      },
-      {
-        text: "MIPS ELF analysis through Ghidra",
-        source: "providers/ghidra-mips.md",
-        route: "/ghidra-mips",
-      },
-      {
-        text: "PSP static ELF analysis through Ghidra",
-        source: "providers/ghidra-psp.md",
-        route: "/ghidra-psp",
-      },
-      {
-        text: "RISC-V ELF analysis through Ghidra",
-        source: "providers/ghidra-riscv.md",
-        route: "/ghidra-riscv",
-      },
-      {
-        text: "Windows Ghidra P0",
-        source: "providers/windows-ghidra-p0.md",
-        route: "/windows-ghidra-p0",
-      },
-      {
-        text: "Headerless raw-binary analysis with Ghidra",
-        source: "providers/raw-binary.md",
-        route: "/raw-binary",
-      },
-      {
-        text: "IDA provider",
-        source: "providers/ida-provider.md",
-        route: "/ida-provider",
-      },
-      {
-        text: "JEB instrumentation and analysis",
-        source: "providers/jeb-analysis.md",
-        route: "/jeb-analysis",
-      },
-    ],
-  },
-  {
-    text: "Contracts and evidence",
-    items: [
-      {
-        text: "MCP runtime contracts",
-        source: "reference/mcp-contracts.md",
-        route: "/mcp-contracts",
-      },
-      {
-        text: "Reconstruction obligation ledgers",
-        source: "reference/reconstruction-obligation-ledgers.md",
-        route: "/reconstruction-obligation-ledgers",
-      },
-    ],
-  },
-  {
-    text: "Development and verification",
-    items: [
-      {
-        text: "Settings and recovery",
-        source: "design/limits-and-recovery.md",
-        route: "/design/limits-and-recovery",
-      },
-      {
-        text: "MCP tool design",
-        source: "development/tool-design.md",
-        route: "/tool-design",
-      },
-      {
-        text: "Testing REA",
-        source: "development/testing.md",
-        route: "/testing",
-      },
-      {
-        text: "Client and agent verification",
-        source: "development/client-verification.md",
-        route: "/client-verification",
-      },
-      {
-        text: "Reconstruction readiness conformance",
-        source: "development/reconstruction-readiness.md",
-        route: "/reconstruction-readiness",
-      },
-      {
-        text: "Releasing REA",
-        source: "development/releasing.md",
-        route: "/releasing",
-      },
-      {
-        text: "REA roadmap",
-        source: "development/roadmap.md",
-        route: "/roadmap",
-      },
-    ],
-  },
-  {
-    text: "Release migrations",
-    items: [
-      {
-        text: "Upgrading from REA 6.1 to 6.2",
-        source: "migrations/migration-6.2.md",
-        route: "/migration-6.2",
-      },
-    ],
-  },
-  {
-    text: "Signal recordings",
-    items: [
-      {
-        text: "Recorded signal inspection",
-        source: "guides/signals/signal-recordings.md",
-        route: "/signal-recordings",
-      },
-    ],
-  },
-  {
-    text: "Additional guides",
-    items: [
-      {
-        text: "Offline API contract inventory",
-        source: "api-contracts.md",
-        route: "/api-contracts",
-      },
-      {
-        text: "Bun standalone executables",
-        source: "bun-standalone.md",
-        route: "/bun-standalone",
-      },
-      {
-        text: "Capability composition and ownership",
-        source: "capability-composition.md",
-        route: "/capability-composition",
-      },
-      {
-        text: ".NET single-file bundles",
-        source: "dotnet-bundles.md",
-        route: "/dotnet-bundles",
-      },
-      {
-        text: "ESP flash images",
-        source: "esp-flash-image.md",
-        route: "/esp-flash-image",
-      },
-      {
-        text: "U-Boot FIT images",
-        source: "fit-images.md",
-        route: "/fit-images",
-      },
-      {
-        text: "Measure MCP catalog costs in Codex",
-        source: "mcp-catalog-evaluation.md",
-        route: "/mcp-catalog-evaluation",
-      },
-      {
-        text: "Offline Playwright traces",
-        source: "playwright-traces.md",
-        route: "/playwright-traces",
-      },
-      {
-        text: "Testing lanes and provider verification",
-        source: "testing-lanes.md",
-        route: "/testing-lanes",
-      },
-      {
-        text: "UF2 and DfuSe images",
-        source: "uf2-dfuse.md",
-        route: "/uf2-dfuse",
-      },
-      {
-        text: "WeChat mini-program wxapkg archives",
-        source: "wxapkg.md",
-        route: "/wxapkg",
-      },
-      {
-        text: "Binary hardening",
-        source: "binary-hardening.md",
-        route: "/binary-hardening",
-      },
-      {
-        text: "Desktop application capture",
-        source: "desktop-application-capture.md",
-        route: "/desktop-application-capture",
-      },
-      {
-        text: "Desktop application export",
-        source: "desktop-application-export.md",
-        route: "/desktop-application-export",
-      },
-      {
-        text: "Desktop application state",
-        source: "desktop-application-state.md",
-        route: "/desktop-application-state",
-      },
-      {
-        text: "Desktop application tasks",
-        source: "desktop-application-tasks.md",
-        route: "/desktop-application-tasks",
-      },
-      {
-        text: "Desktop build computer",
-        source: "desktop-build-computer.md",
-        route: "/desktop-build-computer",
-      },
-      {
-        text: "Desktop build witness",
-        source: "desktop-build-witness.md",
-        route: "/desktop-build-witness",
-      },
-      {
-        text: "iNES containers",
-        source: "ines-containers.md",
-        route: "/ines-containers",
-      },
-      {
-        text: "Build RL environments with REA",
-        source: "agent-environments-quickstart.md",
-        route: "/agent-environments-quickstart",
-      },
-      {
-        text: "Agent environments from recorded captures",
-        source: "agent-environments.md",
-        route: "/agent-environments",
-      },
-      {
-        text: "APK signature schemes",
-        source: "apk-signature.md",
-        route: "/apk-signature",
-      },
-      {
-        text: "Apple IPS crash reports",
-        source: "apple-ips.md",
-        route: "/apple-ips",
-      },
-      {
-        text: "Static analysis in GitHub Actions",
-        source: "ci-analysis.md",
-        route: "/ci-analysis",
-      },
-      {
-        text: "Desktop installation directories",
-        source: "desktop-applications.md",
-        route: "/desktop-applications",
-      },
-      {
-        text: "Flattened devicetree inspection",
-        source: "devicetree.md",
-        route: "/devicetree",
-      },
-      {
-        text: "Electron fuse state",
-        source: "electron-fuses.md",
-        route: "/electron-fuses",
-      },
-      { text: "ELF note tables", source: "elf-notes.md", route: "/elf-notes" },
-      {
-        text: "Erlang BEAM files",
-        source: "erlang-beam.md",
-        route: "/erlang-beam",
-      },
-      { text: "ESP images", source: "esp-image.md", route: "/esp-image" },
-      {
-        text: "GameCube DOL analysis through Ghidra",
-        source: "ghidra-dol.md",
-        route: "/ghidra-dol",
-      },
-      {
-        text: "PowerPC ELF analysis through Ghidra",
-        source: "ghidra-ppc.md",
-        route: "/ghidra-ppc",
-      },
-      {
-        text: "Godot PCK archives",
-        source: "godot-pck.md",
-        route: "/godot-pck",
-      },
-      {
-        text: "Static CUDA and HIP code objects",
-        source: "gpu-code-objects.md",
-        route: "/gpu-code-objects",
-      },
-      {
-        text: "Intel HEX and S-record images",
-        source: "hex-records.md",
-        route: "/hex-records",
-      },
-      {
-        text: "IL2CPP metadata",
-        source: "il2cpp-metadata.md",
-        route: "/il2cpp-metadata",
-      },
-      {
-        text: "Static JavaScript route inventory",
-        source: "javascript-route-inventory.md",
-        route: "/javascript-route-inventory",
-      },
-      {
-        text: "Linux kernel modules",
-        source: "kernel-modules.md",
-        route: "/kernel-modules",
-      },
-      {
-        text: "Kuna provider",
-        source: "kuna-provider.md",
-        route: "/kuna-provider",
-      },
-      {
-        text: "Model file declarations",
-        source: "model-artifacts.md",
-        route: "/model-artifacts",
-      },
-      {
-        text: "Match native functions across builds",
-        source: "native-function-matching.md",
-        route: "/native-function-matching",
-      },
-      {
-        text: "Node.js single executable applications",
-        source: "node-sea.md",
-        route: "/node-sea",
-      },
-      {
-        text: "PE Authenticode certificate tables",
-        source: "pe-certificates.md",
-        route: "/pe-certificates",
-      },
-      {
-        text: "PE import and delay-load tables",
-        source: "pe-imports.md",
-        route: "/pe-imports",
-      },
-      {
-        text: "PE TLS callbacks and load configuration",
-        source: "pe-load-config.md",
-        route: "/pe-load-config",
-      },
-      {
-        text: "Python packaged applications",
-        source: "python-packaged-applications.md",
-        route: "/python-packaged-applications",
-      },
-      {
-        text: "CPython pyc inspection",
-        source: "python-pyc.md",
-        route: "/python-pyc",
-      },
-      {
-        text: "Reconstruction coverage",
-        source: "reconstruction-coverage.md",
-        route: "/reconstruction-coverage",
-      },
-      {
-        text: "Reverse-engineering tool integrations",
-        source: "reverse-engineering-tools.md",
-        route: "/reverse-engineering-tools",
-      },
-      {
-        text: "Rust binary dependency metadata",
-        source: "rust-binaries.md",
-        route: "/rust-binaries",
-      },
-      {
-        text: "U-Boot legacy uImage containers",
-        source: "uimage.md",
-        route: "/uimage",
-      },
-      {
-        text: "UnityFS AssetBundle archives",
-        source: "unityfs.md",
-        route: "/unityfs",
-      },
-    ],
-  },
-];
-
-export const documentationRewrites = Object.fromEntries(
-  documentationSections.flatMap((section) =>
-    section.items.flatMap((item) => {
-      const target = `${item.route.slice(1)}.md`;
-      return item.source === target ? [] : [[item.source, target]];
-    }),
-  ),
-);

docs/README.md

@@ -1,195 +0,0 @@
-# Documentation directory
-
-REA documentation is organized by reader task and document owner. This directory
-links every authored guide; the [site](https://rea.tools/) also serves separate
-product pages. The VitePress documentation source is this `docs/` tree.
-
-## Getting started
-
-- [Installation and setup](getting-started/installation.md)
-- [Client configuration and troubleshooting](getting-started/client-configuration.md)
-- [CLI and Evidence](getting-started/cli.md)
-- [Guided MCP prompts and completion](getting-started/mcp-prompts.md)
-
-## Native binaries
-
-- [Native binary investigation](guides/native/native-investigation.md)
-- [Go binary build metadata](guides/native/go-binaries.md)
-- [Offline binary diagnostics](guides/native/binary-diagnostics.md)
-- [Recorded crash evidence](guides/native/recorded-crashes.md)
-
-## JavaScript and Electron
-
-- [JavaScript Application Graph](guides/javascript/javascript-application-graph.md)
-- [Cross-layer JavaScript application workflows](guides/javascript/javascript-application-workflows.md)
-- [JavaScript artifact reconstruction](guides/javascript/javascript-artifact-reconstruction.md)
-- [JavaScript source recovery](guides/javascript/javascript-recovery.md)
-- [Passive Node and Electron runtime observation](guides/javascript/javascript-runtime-observation.md)
-- [JavaScript static/runtime reconciliation](guides/javascript/javascript-runtime-reconciliation.md)
-- [Electron file-page observation](guides/javascript/electron-observation.md)
-
-## Browser and captured websites
-
-- [Website observation with CDP](guides/web/browser-observation.md)
-- [Browser scenario contract](guides/web/browser-scenario-contract.md)
-- [Website runtime source attribution](guides/web/web-runtime.md)
-- [Historical web network captures](guides/web/web-network-captures.md)
-- [HTTP/3 capture lab](http3-capture-lab.md)
-- [Captured website source locations](guides/web/web-source-location.md)
-- [Captured website module relationships](guides/web/website-module-trace.md)
-- [Captured website scripts and static JavaScript analysis](guides/web/website-script-export.md)
-
-## Android applications
-
-- [Static Android APK analysis](guides/android/android-analysis.md)
-- [Apktool resource decoding](guides/android/apktool-resource-analysis.md)
-- [ADB device inspection and acquisition](guides/android/adb-device-analysis.md)
-- [Flutter build identification](guides/android/flutter-analysis.md)
-
-## Apple applications
-
-- [Apple Application Inventory Projection](guides/apple/apple-application-analysis.md)
-
-## .NET assemblies
-
-- [Managed-code analysis](guides/managed/managed-code-analysis.md)
-
-## Firmware
-
-- [Firmware analysis](guides/firmware/firmware-analysis.md)
-
-## HarmonyOS packages
-
-- [Static HarmonyOS package inventory](guides/harmony/harmony-analysis.md)
-
-## WebAssembly
-
-- [Offline WebAssembly artifacts](guides/wasm/wasm-artifacts.md)
-
-## EVM contracts
-
-- [Offline EVM bytecode](guides/evm/evm-bytecode.md)
-
-## Databases and recorded packets
-
-- [SQLite database snapshots](guides/data/sqlite-databases.md)
-- [Recorded packet capture inspection](guides/data/packet-captures.md)
-- [Packet capture summaries](guides/data/pcap-analysis.md)
-
-## Process capture and instrumentation
-
-- [Process capture](guides/runtime/process-capture.md)
-- [Frida instrumentation](guides/runtime/frida-instrumentation.md)
-
-## Signal recordings
-
-- [Recorded signal inspection](guides/signals/signal-recordings.md)
-
-## Provider setup and formats
-
-- [Ghidra provider semantics](providers/ghidra-provider.md)
-- [DOS MZ and COM analysis with Ghidra](providers/ghidra-dos.md)
-- [Optional NativeAOT metadata recovery](providers/ghidra-nativeaot.md)
-- [MIPS ELF analysis through Ghidra](providers/ghidra-mips.md)
-- [PSP static ELF analysis through Ghidra](providers/ghidra-psp.md)
-- [RISC-V ELF analysis through Ghidra](providers/ghidra-riscv.md)
-- [Windows Ghidra P0](providers/windows-ghidra-p0.md)
-- [Headerless raw-binary analysis with Ghidra](providers/raw-binary.md)
-- [IDA provider](providers/ida-provider.md)
-- [JEB instrumentation and analysis](providers/jeb-analysis.md)
-
-## Contracts and evidence
-
-- [MCP runtime contracts](reference/mcp-contracts.md)
-- [Reconstruction obligation ledgers](reference/reconstruction-obligation-ledgers.md)
-
-## Development and verification
-
-- [Settings and recovery](design/limits-and-recovery.md)
-- [MCP tool design](development/tool-design.md)
-- [Testing REA](development/testing.md)
-- [Client and agent verification](development/client-verification.md)
-- [Reconstruction readiness conformance](development/reconstruction-readiness.md)
-- [Releasing REA](development/releasing.md)
-- [REA roadmap](development/roadmap.md)
-
-## Release migrations
-
-- [Upgrading from REA 6.1 to 6.2](migrations/migration-6.2.md)
-
-## Architecture and authoring
-
-- [Architecture map](https://github.com/morluto/rea/blob/main/docs/architecture/architecture.mermaid)
-- [Documentation ownership and contribution model](development/documentation.md)
-- [Feature specifications](specs/README.md)
-- [Architectural decision records](adr/README.md)
-
-## Machine-owned documentation
-
-| Path                                      | Owner and update command                                                                  |
-| ----------------------------------------- | ----------------------------------------------------------------------------------------- |
-| `public/product-catalog.json`             | Ignored contract projection; `npm run docs:generate`                                      |
-| `verification/managed-conformance-*.json` | Ignored managed conformance projections; `npm run evidence:generate`                      |
-| `error-contract.schema.json`              | Tracked schema from contracts; `npm run docs:error-schema`                                |
-| `user-visible-errors.csv`                 | Authored error classification inventory; preserve its schema                              |
-| `releases/<version>.contributions.json`   | Durable release contribution record; follow the [release guide](development/releasing.md) |
-| `assets/`                                 | Shared authored images referenced by guides                                               |
-
-Do not edit generated catalogs or evidence to change product facts. Change their
-canonical contracts or producer and regenerate. Historical release records retain
-the exact commit messages and references from the release they describe.
-
-## Additional guides
-
-- [Offline API contract inventory](api-contracts.md)
-- [Bun standalone executables](bun-standalone.md)
-- [Capability composition and ownership](capability-composition.md)
-- [.NET single-file bundles](dotnet-bundles.md)
-- [ESP flash images](esp-flash-image.md)
-- [U-Boot FIT images](fit-images.md)
-- [Measure MCP catalog costs in Codex](mcp-catalog-evaluation.md)
-- [Offline Playwright traces](playwright-traces.md)
-- [Testing lanes and provider verification](testing-lanes.md)
-- [UF2 and DfuSe images](uf2-dfuse.md)
-- [WeChat mini-program wxapkg archives](wxapkg.md)
-- [Binary hardening](binary-hardening.md)
-- [Desktop application capture](desktop-application-capture.md)
-- [Desktop application export](desktop-application-export.md)
-- [Desktop application state](desktop-application-state.md)
-- [Desktop application tasks](desktop-application-tasks.md)
-- [Desktop build computer](desktop-build-computer.md)
-- [Desktop build witness](desktop-build-witness.md)
-- [iNES containers](ines-containers.md)
-- [Build RL environments with REA](agent-environments-quickstart.md)
-- [Agent environments from recorded captures](agent-environments.md)
-- [APK signature schemes](apk-signature.md)
-- [Apple IPS crash reports](apple-ips.md)
-- [Static analysis in GitHub Actions](ci-analysis.md)
-- [Desktop installation directories](desktop-applications.md)
-- [Flattened devicetree inspection](devicetree.md)
-- [Electron fuse state](electron-fuses.md)
-- [ELF note tables](elf-notes.md)
-- [Erlang BEAM files](erlang-beam.md)
-- [ESP images](esp-image.md)
-- [GameCube DOL analysis through Ghidra](ghidra-dol.md)
-- [PowerPC ELF analysis through Ghidra](ghidra-ppc.md)
-- [Godot PCK archives](godot-pck.md)
-- [Static CUDA and HIP code objects](gpu-code-objects.md)
-- [Intel HEX and S-record images](hex-records.md)
-- [IL2CPP metadata](il2cpp-metadata.md)
-- [Static JavaScript route inventory](javascript-route-inventory.md)
-- [Linux kernel modules](kernel-modules.md)
-- [Kuna provider](kuna-provider.md)
-- [Model file declarations](model-artifacts.md)
-- [Match native functions across builds](native-function-matching.md)
-- [Node.js single executable applications](node-sea.md)
-- [PE Authenticode certificate tables](pe-certificates.md)
-- [PE import and delay-load tables](pe-imports.md)
-- [PE TLS callbacks and load configuration](pe-load-config.md)
-- [Python packaged applications](python-packaged-applications.md)
-- [CPython pyc inspection](python-pyc.md)
-- [Reconstruction coverage](reconstruction-coverage.md)
-- [Reverse-engineering tool integrations](reverse-engineering-tools.md)
-- [Rust binary dependency metadata](rust-binaries.md)
-- [U-Boot legacy uImage containers](uimage.md)
-- [UnityFS AssetBundle archives](unityfs.md)

docs/adb-device-analysis.md

@@ -288,7 +288,7 @@ Record: verified against adb 34.0.5 on Linux against an Android 14
 (API 34) x86_64 emulator — all operations above, a 224-package inventory,
 287 services, 92 features, a real two-APK split set pulled with byte-exact
 digests, a verified push/pull roundtrip, a 1.3 MB screen capture, and the
-complete package lifecycle; see `docs/development/testing.md` for the lane summary.
+complete package lifecycle; see `docs/testing.md` for the lane summary.
 
 Intent integer extras use signed decimal text. The ADB argument encoder removes
 redundant leading zeros for Android's radix-sensitive `--ei` parser while retained

docs/adr/README.md

@@ -1,9 +0,0 @@
-# Architectural decision records
-
-Store one actual decision per `docs/adr/<domain>/<decision-slug>.md`, without a
-global sequence number. Use meaningful names and the Michael Nygard sections:
-Status, Context, Decision and Consequences. Link each decision from its owning
-feature specification.
-
-See [the authoring guide](../development/documentation.md#feature-lifecycle) for
-the distinction between specifications, roadmaps and isolated decisions.

docs/agent-environments-quickstart.md

@@ -11,14 +11,14 @@ with your RL framework to set task goals, check rewards, and run training.
 
 ## Before you start
 
-Install [REA and its agent integration](getting-started/installation.md). To record an app,
+Install [REA and its agent integration](installation.md). To record an app,
 you also need a running test instance and a Chrome-family browser. Choose an
 instance where the agent is allowed to create, edit, and delete data. REA
 records the app you provide; you start it and prepare its test data.
 
 To run the exported environment, install the
 [AgentEnv framework](https://github.com/scaleapi/agentenv-framework#install)
-and start Docker. REA's [compatibility check](development/testing.md#exported-environment-bundles)
+and start Docker. REA's [compatibility check](testing.md#exported-environment-bundles)
 uses AgentEnv version `0.9.1431` with Python 3.12.
 
 There are two ways to build an environment: ask your agent to record the app,
@@ -52,7 +52,7 @@ work and which need more evidence. The app is used during recording; the
 exported environment runs from the saved data.
 
 After your agent exports the folder, skip to
-[run the environment](#run-the-environment). The next section is an
+[run the environment](#3-run-the-environment). The next section is an
 alternative for an existing recording.
 
 ## 2. Or build from a saved recording
@@ -91,8 +91,6 @@ A successful build means the folder was created. Check the report to confirm
 it supports the operations your tasks need. `coverage: null` means the build
 could not prepare state for this environment and it will use replay.
 
-<a id="run-the-environment"></a>
-
 ## 3. Run the environment
 
 Whether your agent exported the folder or you built it from a HAR, run it

docs/agent-environments.md

@@ -30,7 +30,7 @@ rea environment-serve manifest.json --evidence capture.json --port 8765
 ```
 
 The first command inspects the capture; the second projects the
-[environment manifest](guides/web/web-network-captures.md#environment-manifest) view from
+[environment manifest](web-network-captures.md#environment-manifest) view from
 it, where `view.json` wraps the capture Evidence as the inline source:
 
 ```json
@@ -163,7 +163,7 @@ at info level; the report is the only output on stdout:
 
 `coverage` is the state's read views and write plans summarized, and `null`
 when the state is unavailable and the bundle serves replay. The
-[environment coverage](guides/web/web-network-captures.md#environment-coverage) view
+[environment coverage](web-network-captures.md#environment-coverage) view
 reports the same summary for any capture without building, so an agent can
 check it after each recording. The view summarizes the state as derived; it
 does not apply the serve-time admission checks, so for an environment whose
@@ -235,7 +235,7 @@ name `export_environment_bundle`; the others name their stage as
 ## From a browser scenario
 
 The capture can also come from REA itself: a
-[browser scenario](guides/web/browser-scenario-contract.md) records a scripted session
+[browser scenario](browser-scenario-contract.md) records a scripted session
 in a browser REA launches, and its Evidence is a manifest parent like a HAR
 inspection. Select the `network` event family and response bodies. A replayed
 reply carries up to 256 KiB of a recorded body, but the scenario keeps at most
@@ -321,7 +321,7 @@ declared secret replaced by its redaction marker (a body that redaction had to
 empty replays no body).
 
 To record writes, sign in through the UI and then send the application's API
-calls with [request steps](guides/web/browser-scenario-contract.md#request-steps): each
+calls with [request steps](browser-scenario-contract.md#request-steps): each
 sends one request to the start origin through the page's own `fetch`, with the
 session's cookies, and a header can carry the CSRF cookie or stored token the
 application's own requests send. A write is served only when the capture shows
@@ -481,7 +481,7 @@ captured text without changing the tool names or schema fields clients use.
 
 Replay answers each call from one recording, so the answers reflect whichever
 moment of the capture recorded them. The
-[environment state](guides/web/web-network-captures.md#environment-state) view extracts
+[environment state](web-network-captures.md#environment-state) view extracts
 instead the data the capture's reads observed before the first related write:
 entity types with an identity field, entities with their recorded values,
 documents for reads that are not entities, and a render plan per read tool,
@@ -503,14 +503,14 @@ see [Serve from the state](#serve-from-the-state).
 
 `--host` and `--port` default to `MCP_HOST` and `MCP_PORT` from the
 environment, then to `127.0.0.1` and an ephemeral port, exactly as
-[`rea mcp --http`](getting-started/cli.md#serve-mcp-over-streamable-http) resolves them. The
+[`rea mcp --http`](cli.md#serve-mcp-over-streamable-http) resolves them. The
 bound MCP URL is written to stderr as one JSON log line
 (`"msg":"MCP transport listening"` with `url`); `REA_LOG_LEVEL` overrides that
 log level. `ENVIRONMENT_NAME` renames the served environment; otherwise the
 manifest's `name` is used, and a set but blank value is refused as
 `configuration_invalid` before binding rather than silently falling back. The
 listener serves one MCP client at a time with the same session, `Host` header
-and shutdown contract as [transports](reference/mcp-contracts.md#transports) describes.
+and shutdown contract as [transports](mcp-contracts.md#transports) describes.
 It runs until SIGINT or SIGTERM, then closes the listener, prints one
 `{"status":"stopped", …}` document whose `state` member says whether it served
 from the state, and exits `130` or `143`.
@@ -585,7 +585,7 @@ names the method and path template, then what the tool returns, one level deep:
 `returns a JSON object with fields …`, `returns a JSON array of objects with
 fields …` or `returns a JSON object whose <member> lists objects with fields …`,
 where a list is an array of objects found by the
-[environment state](guides/web/web-network-captures.md#environment-state)'s list rule (the
+[environment state](web-network-captures.md#environment-state)'s list rule (the
 root array, or the one array of objects an envelope carries). Field and member
 names are written as JSON strings, so a captured name cannot read as more of
 the description; a member name too long to show whole is a quoted prefix marked
@@ -641,7 +641,7 @@ rea environment-serve manifest.json --evidence capture.json
 ```
 
 Before it binds, the server derives the
-[environment state](guides/web/web-network-captures.md#environment-state) the capture
+[environment state](web-network-captures.md#environment-state) the capture
 observed: it runs the `environment-state` view on the capture in-process with
 the manifest's `template_rules` in the same order, exactly as
 `inspect-analysis-view` projects it from the same capture, so the state
@@ -733,7 +733,7 @@ query model may describe supported paging; an empty later page cannot start
 returning earlier entities merely because it was empty in the capture.
 
 `POST`, `PUT`, `PATCH` and `DELETE` tools are served only when the state's
-[write plan](guides/web/web-network-captures.md#environment-state) for them is served:
+[write plan](web-network-captures.md#environment-state) for them is served:
 the capture's later reads confirmed the effect the plan models. Other write
 tools are not served, so no call claims a change it does not make; each one's
 plan states why in its `reason`. A served write changes the live state, which
@@ -1187,7 +1187,7 @@ read, not that the write had no other effect.
 ## Compatibility verification
 
 `npm run verify:agentenv:environment` is the hosted `real-agentenv` lane
-described in [testing](development/testing.md#exported-environment-bundles). It projects
+described in [testing](testing.md#exported-environment-bundles). It projects
 the Grafana-shaped source-owned capture through the built CLI, packs the
 checkout, exports a bundle with `--package-tarball`, runs it with the pinned
 `agentenv-framework` release on the runner's Docker and requires the smoke task

docs/android-analysis.md

@@ -6,12 +6,12 @@ kept as an unmodified, commit-pinned Git submodule; see
 application workflow and return artifact-bound Evidence inline.
 
 This family is present on repository main and in npm 4.1.0. Check the
-[released package boundary](../../getting-started/installation.md#released-package-and-main) and the
+[released package boundary](installation.md#released-package-and-main) and the
 connected server's tool list before selecting it.
 
 On Linux, JADX launches an REA-owned process and requires a procps-compatible
 `ps` on REA's `PATH`; see the shared
-[Linux process prerequisite](../../getting-started/installation.md#linux-owned-process-prerequisite).
+[Linux process prerequisite](installation.md#linux-owned-process-prerequisite).
 
 ## Optional package delivery
 
@@ -687,14 +687,14 @@ bounds each upstream call. Timeout recovery reports the effective milliseconds
 and range, with `details.limit` identifying the runtime setting. An invalid
 provider-local launch value can also be repaired by a runtime override; reset
 exposes that invalid launch value again. See the
-[settings design](../../design/limits-and-recovery.md#invalid-launch-configuration).
+[settings design](design/limits-and-recovery.md#invalid-launch-configuration).
 A passing JADX configuration check in `rea doctor` reports its launch-derived
 `operation_timeout_ms`; it does not inspect another running server's overrides. Explicit
 cancellation still ends the operation immediately, and partial observations
 and owned-process cleanup are unchanged. Raising the deadline does not extend
 the bridge's 30-second startup handshake or the upstream **90-second**
 decompilation limit. MCP clients enforce their own tool-call timeouts, and
-setup's derived [client tool timeout](../../getting-started/client-configuration.md) does not include
+setup's derived [client tool timeout](client-configuration.md) does not include
 this setting, so also raise the client timeout when selecting a longer
 deadline.
 

docs/apktool-resource-analysis.md

@@ -174,7 +174,7 @@ OpenJDK 25 against a signed aapt2-built probe APK carrying two resource
 locales — launcher version, on-disk digest agreement, apktool.yml metadata
 (1.2.3, SDK 24–34), manifest package agreement, default and `de` string
 tables projected. Parser goldens in the test suite come from the same
-decode. See `docs/development/testing.md` for the lane summary.
+decode. See `docs/testing.md` for the lane summary.
 
 Multi-locale and table-only projection were also verified through real CLI and
 stdio MCP workflows on Linux with Apktool 3.0.3/JDK 21 against NewPipe 0.29.1,

docs/apple-ips.md

@@ -87,7 +87,7 @@ that matches none of those rules is `unclassified`.
 
 Opened Mach-O and dSYM UUID joins remain unobserved. Symbol names printed
 inside the report are recorded claims and are not verified. Linux ELF cores
-use the separate [recorded crash](guides/native/recorded-crashes.md) workflow.
+use the separate [recorded crash](recorded-crashes.md) workflow.
 
 ## Limits and failures
 

docs/binary-diagnostics.md

@@ -125,7 +125,7 @@ reply budget applies to the decoder record; the CLI/MCP Evidence envelope adds
 copies and encoding overhead. The
 pinned MCP SDK defaults to a 10 MiB receive buffer. Large complete results need
 a caller-configured `StdioClientTransport({ maxBufferSize: ... })` and a matching
-server `REA_MCP_MAX_RESPONSE_BYTES`. See [MCP delivery budgets](../../reference/mcp-contracts.md#tool-results).
+server `REA_MCP_MAX_RESPONSE_BYTES`. See [MCP delivery budgets](mcp-contracts.md#tool-results).
 These settings affect delivery, not decoder coverage or limits. The large
 extended-index verification uses 256 MiB and an explicit five-minute request
 timeout in its separate opt-in MCP lane. REA does not silently truncate the result. Python lowers resource soft limits to at most 3 GiB virtual address space,

docs/browser-observation.md

@@ -31,7 +31,7 @@ authority are validated independently before selection and connection.
 
 For a compact route query, select `detail: "summary"` and a
 `view: {kind: "javascript-routes", collection: "routes", limit: 20}`. The
-shared [route inventory](../../javascript-route-inventory.md) preserves source IDs,
+shared [route inventory](javascript-route-inventory.md) preserves source IDs,
 precise locations, partial coverage, and the complete parent Evidence for
 subsequent filtered pages. Static candidates never establish complete application
 coverage or reachability.
@@ -147,7 +147,7 @@ Caller-owned JSON/base64 strings, input parsing and validation, transport
 buffers, garbage-collector behavior, and other runtime memory are outside this
 estimate; the budget does not promise a bound on total process memory.
 
-Electron `file://` pages use a separate provider and target boundary; see [electron-observation.md](../javascript/electron-observation.md).
+Electron `file://` pages use a separate provider and target boundary; see [electron-observation.md](electron-observation.md).
 
 ## Provider authorities
 
@@ -177,7 +177,7 @@ See [the reproduction and Chromium ownership limitation](https://github.com/morl
 
 Existing static application Evidence and passive web/Electron captures can be
 combined later through
-[JavaScript static/runtime reconciliation](../javascript/javascript-runtime-reconciliation.md).
+[JavaScript static/runtime reconciliation](javascript-runtime-reconciliation.md).
 
 ## Start a browser
 

docs/ci-analysis.md

@@ -65,14 +65,14 @@ cancellation can still prevent upload.
 that analysis was complete. A successful operation can retain partial analysis,
 unknowns, and limitations. Exit zero is not a security verdict, proof of complete
 coverage, or a policy gate for those findings. Inspect the saved Evidence and
-coverage before making such a decision. See [output and exit status](getting-started/cli.md#output-and-exit-status).
+coverage before making such a decision. See [output and exit status](cli.md#output-and-exit-status).
 
 A nonzero exit can represent invalid input, unavailable tooling, an unsupported
 host/capability, or another operation failure. Keep the original JSON error (when
 emitted), stderr, and exit code, and use their category/message to diagnose it.
 An early startup failure may leave `analysis.json` empty; do not parse that as
 successful analysis. Select a supported operation or explicitly provision its
-[documented prerequisites](getting-started/installation.md); do not silently switch providers,
+[documented prerequisites](installation.md); do not silently switch providers,
 execute the artifact, or ignore the failure to obtain a green job.
 
 To exercise the failure path, temporarily set `ARTIFACT_PATH` to

docs/cli.md

@@ -4,7 +4,7 @@ Use the CLI for a direct inspection or a script. It uses the same application
 workflows and evidence contracts as REA's MCP server. Each CLI invocation is a
 separate process; save results when you want to use them in a later command.
 For a pinned, noninteractive workflow with retained reports, see
-[static analysis in GitHub Actions](../ci-analysis.md).
+[static analysis in GitHub Actions](ci-analysis.md).
 
 ## Run a command
 
@@ -19,7 +19,7 @@ Use an extracted application directory or an ASAR as the target. Static
 JavaScript analysis returns the application graph and Evidence directly.
 Generic `rea analyze PATH` selects this workflow for directories and `.asar`
 files when neither `--provider` nor `--snapshot` is supplied. See
-[JavaScript artifact reconstruction](../guides/javascript/javascript-artifact-reconstruction.md)
+[JavaScript artifact reconstruction](javascript-artifact-reconstruction.md)
 for results, integrity checks and coverage.
 
 The complete application Evidence can be hundreds of megabytes for a real
@@ -59,7 +59,7 @@ For example, a 334 MB Obsidian application Evidence file yields a summary view
 of about 10 KB. Replace the view with
 `{"kind": "page", "collection": "modules", "offset": 0, "limit": 32}` for a
 module page. See
-[JavaScript application workflows](../guides/javascript/javascript-application-workflows.md) for
+[JavaScript application workflows](javascript-application-workflows.md) for
 views, feature traces and comparisons that take the same saved Evidence.
 
 Add `--timings` to a command to write one JSON timing record to stderr. For
@@ -226,7 +226,7 @@ saving the complete original Evidence in a new bundle. Summary requires that
 explicit destination; existing files are preserved. Later
 `inspect-analysis-view` calls can page the exact parent from the saved bundle
 without reopening the assembly. See
-[CLI summary and saved member rows](../guides/managed/managed-code-analysis.md#cli-summary-and-saved-member-rows)
+[CLI summary and saved member rows](managed-code-analysis.md#cli-summary-and-saved-member-rows)
 for the complete command sequence. Omitted or `--detail complete` retains the
 full inline response.
 
@@ -234,8 +234,8 @@ Choose the workflow from the artifact's contents rather than its `.exe` or
 `.dll` extension. The managed parser requires PE/CLI metadata; it does not
 unpack .NET single-file hosts or decode IL2CPP. For the image, type and method
 names in a Unity `global-metadata.dat`, use
-[IL2CPP metadata](../il2cpp-metadata.md). NativeAOT method bodies require native
-analysis. See the [managed-code guide](../guides/managed/managed-code-analysis.md)
+[IL2CPP metadata](il2cpp-metadata.md). NativeAOT method bodies require native
+analysis. See the [managed-code guide](managed-code-analysis.md)
 for supported deployment forms, selection semantics, and coverage limits.
 
 ## SQLite snapshots
@@ -243,7 +243,7 @@ for supported deployment forms, selection semantics, and coverage limits.
 For a local database snapshot, use `rea inspect-sqlite-database PATH --json`.
 Add `--table NAME --row-limit 20` to read a bounded sample from an ordinary
 table. This command does not require a native analysis provider. See
-[SQLite database snapshots](../guides/data/sqlite-databases.md) for database/WAL identity,
+[SQLite database snapshots](sqlite-databases.md) for database/WAL identity,
 source-file handling and row-value semantics.
 
 ## Native analysis
@@ -256,7 +256,7 @@ rea inspect-go-binary /absolute/path/to/program --json
 ```
 
 The shared CLI/MCP workflow reports compiler version, modules, replacements,
-build settings, original bytes and SHA-256. See [Go binaries](../guides/native/go-binaries.md)
+build settings, original bytes and SHA-256. See [Go binaries](go-binaries.md)
 for supported containers and absent or malformed metadata.
 
 Inspect a Godot PCK without running the game:
@@ -267,7 +267,7 @@ rea extract-artifact game.pck --json
 ```
 
 Formats 2, 3 and 4 retain header, directory and integrity facts. Compact delivery
-keeps complete Evidence in the requested bundle. See [Godot PCK](../godot-pck.md)
+keeps complete Evidence in the requested bundle. See [Godot PCK](godot-pck.md)
 for embedded packs, batch queries and unknown encrypted coverage.
 
 Inspect a UnityFS AssetBundle without running Unity:
@@ -278,7 +278,7 @@ rea extract-artifact content.bundle --json
 ```
 
 Format versions 6 through 8 retain header, block and directory facts with
-none/LZ4/LZ4HC block decompression. See [UnityFS](../unityfs.md) for encryption
+none/LZ4/LZ4HC block decompression. See [UnityFS](unityfs.md) for encryption
 and LZMA coverage boundaries.
 
 Inspect a WeChat mini-program package without WeChat or an unpacker:
@@ -290,7 +290,7 @@ rea extract-artifact app.wxapkg --json
 
 Plaintext packages retain header, table and member facts with verbatim member
 bytes. `V1MMWX` packages are detected as encrypted coverage and refused on
-extraction. See [wxapkg](../wxapkg.md) for layout and coverage boundaries.
+extraction. See [wxapkg](wxapkg.md) for layout and coverage boundaries.
 
 Inspect an ESP32-family app or bootloader image without esptool:
 
@@ -301,7 +301,7 @@ rea extract-artifact firmware.bin --json
 
 The inventory lists each segment with its ESP-IDF load classification, the
 checksum and SHA-256 results, the descriptor and any Secure Boot v2 signature
-blocks. See [ESP images](../esp-image.md) for recognition, coverage and refusals.
+blocks. See [ESP images](esp-image.md) for recognition, coverage and refusals.
 
 Inspect an ESP flash dump, or one read from a flash address other than 0:
 
@@ -313,7 +313,7 @@ rea extract-artifact flash.bin --json
 
 The inventory lists the bootloader, the partition table and each partition,
 with ESP image facts for app partitions and the OTA records. See
-[ESP flash images](../esp-flash-image.md) for table location, inputs and limits.
+[ESP flash images](esp-flash-image.md) for table location, inputs and limits.
 
 Inspect a Node.js SEA carrier without running it:
 
@@ -322,7 +322,7 @@ rea inspect-artifact ./application --json
 rea extract-artifact ./application --json
 ```
 
-See [Node.js SEA](../node-sea.md) for supported layouts, script and asset paths,
+See [Node.js SEA](node-sea.md) for supported layouts, script and asset paths,
 fuse observations, and the real-fixture verification lane.
 
 Inventory and extract Intel HEX or S-record regions:
@@ -332,7 +332,7 @@ rea inspect-artifact ./firmware.hex --json
 rea extract-artifact ./firmware.hex --json
 ```
 
-See [Intel HEX and S-record images](../hex-records.md) for recognition, region
+See [Intel HEX and S-record images](hex-records.md) for recognition, region
 names, metadata and limits.
 
 Inspect and extract stored U-Boot legacy uImage payloads and components:
@@ -342,7 +342,7 @@ rea inspect-artifact ./firmware.bin --detail summary --evidence_output firmware.
 rea extract-artifact ./firmware.bin --json
 ```
 
-See [U-Boot uImage](../uimage.md) for verified CRCs, physical component ranges,
+See [U-Boot uImage](uimage.md) for verified CRCs, physical component ranges,
 unknown names, resource limits and retained views. Compressed bytes stay stored.
 
 `inspect-artifact` and `extract-artifact` also read ZIP members compressed with
@@ -361,7 +361,7 @@ rea inspect-artifact ./firmware.uf2 --json
 rea extract-artifact ./firmware.dfu --json
 ```
 
-See [UF2 and DfuSe images](../uf2-dfuse.md) for recognition, families, numbering,
+See [UF2 and DfuSe images](uf2-dfuse.md) for recognition, families, numbering,
 the DfuSe suffix CRC and limits.
 
 Inventory and extract U-Boot FIT images:
@@ -371,7 +371,7 @@ rea inspect-artifact ./boot.itb --json
 rea extract-artifact ./boot.itb --json
 ```
 
-See [U-Boot FIT images](../fit-images.md) for recognition, data sources, hashes
+See [U-Boot FIT images](fit-images.md) for recognition, data sources, hashes
 and limits.
 
 Inspect local model declarations without loading weights:
@@ -385,7 +385,7 @@ Default hashing reads only headers and leaves full-file identity unknown.
 `--hash full` streams the complete file for SHA-256. Both return typed metadata,
 original tensor declarations and derived totals. MCP summaries retain complete
 Evidence for filtered metadata, tensor and type-total pages; CLI compact delivery
-uses `--detail summary --evidence_output FILE`. See [model files](../model-artifacts.md).
+uses `--detail summary --evidence_output FILE`. See [model files](model-artifacts.md).
 
 Inspect Unity IL2CPP metadata names without Unity or a disassembler:
 
@@ -402,7 +402,7 @@ method instances and `--ghidra-seeds PATH` then writes Ghidra function seeds. It
 with retained Evidence; query indexed rows with filters, batch indices and
 selected fields. The CLI defaults to complete Evidence;
 `--detail summary --evidence_output FILE` exports the full result to a new file
-and returns a compact overview. See [IL2CPP metadata](../il2cpp-metadata.md).
+and returns a compact overview. See [IL2CPP metadata](il2cpp-metadata.md).
 
 Inspect an embedded cargo-auditable Rust dependency list without installing
 Rust or configuring a disassembler:
@@ -414,7 +414,7 @@ rea inspect-rust-binary /absolute/path/to/program --json
 The same workflow reports package names, versions, sources, the root package,
 dependency edges, and the section's file range. A missing `.dep-v0` section is
 null metadata, not proof that the binary has no dependencies. See
-[Rust binaries](../rust-binaries.md).
+[Rust binaries](rust-binaries.md).
 
 Inspect a PE Authenticode certificate table without executing the image or
 verifying signatures:
@@ -426,7 +426,7 @@ rea inspect-pe-certificates /absolute/path/to/application.exe --json
 The workflow reports `WIN_CERTIFICATE` entries and, for PKCS#7 signedData,
 embedded X.509 serial, issuer, subject, and validity fields. A missing security
 directory is observed absence of that table. See
-[PE Authenticode certificate tables](../pe-certificates.md).
+[PE Authenticode certificate tables](pe-certificates.md).
 
 Inspect PE import and delay-load tables without executing the image:
 
@@ -437,7 +437,7 @@ rea inspect-pe-imports /absolute/path/to/application.exe --json
 The workflow reports DLL names, named and ordinal functions, delay-load
 descriptors, and a pefile-compatible import hash of the standard import table.
 A missing import directory is observed absence of that table. See
-[PE import and delay-load tables](../pe-imports.md).
+[PE import and delay-load tables](pe-imports.md).
 
 Inspect ELF PT_NOTE and SHT_NOTE tables without executing the image:
 
@@ -447,7 +447,7 @@ rea inspect-elf-notes /absolute/path/to/program --json
 
 The workflow reports note owners, types, descriptor hashes, and GNU build-id
 or ABI-tag fields when those descriptors match. A missing note table is
-observed absence of those declarations. See [ELF note tables](../elf-notes.md).
+observed absence of those declarations. See [ELF note tables](elf-notes.md).
 
 Inspect an Apple `.ips` crash report without executing a target:
 
@@ -458,7 +458,7 @@ rea inspect-apple-ips /absolute/path/to/report.ips --json
 The workflow reports first-line metadata, process/exception/termination facts,
 threads, usedImages, lossless integer registers, and documented crash classes
 when `bug_type` is `"309"`. Other DiagnosticReports types return no crash
-result. See [Apple IPS crash reports](../apple-ips.md).
+result. See [Apple IPS crash reports](apple-ips.md).
 Inspect Linux kernel module metadata without executing the module or requiring
 `modinfo`:
 
@@ -474,7 +474,7 @@ not decoded and the signature is not validated. Other ELF types are not
 applicable. gzip, xz, and zstd containers are unsupported and name
 `external_decompression` as the next probe: decompress with an external
 utility, then inspect the decompressed file. See
-[Linux kernel modules](../kernel-modules.md).
+[Linux kernel modules](kernel-modules.md).
 
 Inspect a CPython 3.7–3.13 `.pyc` header and nested marshal code objects (3.14 and
 3.15 headers are qualified but their marshal layout is not pinned)
@@ -486,7 +486,7 @@ rea inspect-python-pyc /absolute/path/to/module.pyc --json
 
 The workflow reports the pinned CPython version for the magic, PEP 552 hash or
 mtime/size fields, nested function names, and bytecode SHA-256. Bytecode is
-not decompiled. See [CPython pyc inspection](../python-pyc.md).
+not decompiled. See [CPython pyc inspection](python-pyc.md).
 
 Inspect an Erlang BEAM file without executing bytecode:
 
@@ -496,7 +496,7 @@ rea inspect-erlang-beam /absolute/path/to/app.beam --json
 
 The workflow reports IFF chunk names, atom tables, exports, imports, lambdas,
 and the Code chunk header. Missing optional tables stay null. See
-[Erlang BEAM files](../erlang-beam.md).
+[Erlang BEAM files](erlang-beam.md).
 
 Complete `rea decompile --json` Evidence can be saved and inspected through
 `inspect-analysis-view` with an inline source and
@@ -505,10 +505,10 @@ The projection reads that saved observation without starting a provider;
 offsets/limits count UTF-16 code units. A summary view preserves the original
 selector and distinguishes null from empty text. The MCP tool additionally
 supports `detail: "summary"` on its first call to retain the complete source
-without returning the body inline; see [native investigation](../guides/native/native-investigation.md).
+without returning the body inline; see [native investigation](native-investigation.md).
 
 Configure [Hopper or Ghidra](installation.md#hopper), the
-[IDA adapter](../providers/ida-provider.md), or [Kuna](../kuna-provider.md) before analyzing a
+[IDA adapter](ida-provider.md), or [Kuna](kuna-provider.md) before analyzing a
 native target. Substitute
 your target, search text and function name or address in these examples:
 
@@ -536,11 +536,11 @@ MCP `analyze_function` defaults to the same summary and retains the complete
 dossier in the session for `inspect_analysis_view`.
 
 Run `rea --help` or a command's `--help` for arguments and output options.
-The [generated catalog](../reference/mcp-contracts.md#generated-catalog) lists all CLI commands and MCP
+The [generated catalog](mcp-contracts.md#generated-catalog) lists all CLI commands and MCP
 tools. Provider-specific target support is described in the
-[native guide](../guides/native/native-investigation.md), [DOS guide](../providers/ghidra-dos.md),
-[raw binary guide](../providers/raw-binary.md), [GameCube DOL guide](../ghidra-dol.md), and
-[Windows Ghidra guide](../providers/windows-ghidra-p0.md).
+[native guide](native-investigation.md), [DOS guide](ghidra-dos.md),
+[raw binary guide](raw-binary.md), [GameCube DOL guide](ghidra-dol.md), and
+[Windows Ghidra guide](windows-ghidra-p0.md).
 
 ## Choose a provider
 
@@ -587,13 +587,13 @@ For Hopper, Ghidra, IDA, JADX, and Kuna, run
 such as `pwntools-elf`, report their configuration requirements directly and are
 not accepted by `doctor --provider`. See
 [task readiness](installation.md#check-readiness-for-your-task) and
-[provider selection](../reference/mcp-contracts.md#identity-and-discovery).
+[provider selection](mcp-contracts.md#identity-and-discovery).
 
 The session reports work still in progress through `analysis_activity`.
 A client timeout can end its wait while the provider continues analyzing.
 `cleanup_incomplete` identifies resources whose shutdown or removal could not
-be verified. See [MCP contracts](../reference/mcp-contracts.md) for session lifecycle and
-[Ghidra first-query deadlines](../reference/mcp-contracts.md#ghidra-first-query-deadlines-and-recovery)
+be verified. See [MCP contracts](mcp-contracts.md) for session lifecycle and
+[Ghidra first-query deadlines](mcp-contracts.md#ghidra-first-query-deadlines-and-recovery)
 for import, client timeouts and recovery.
 
 A one-shot command releases its provider session and REA runtime before it
@@ -742,12 +742,6 @@ rea compare left.json right.json --record_pairs '[{"left_evidence_id":"ev_<left-
 Migration: replace `rea compare-bundles` with `rea compare`; the former command
 has been removed. The MCP tool remains `compare_bundles`.
 
-`rea evidence-import` performs process-local bundle authentication and
-validation, reporting record and Unknown-revision counts. `unknowns_added`
-counts revisions, not distinct Unknown IDs. It does not retain records in a
-separate or background MCP server process. To retain records across calls in an
-active MCP session, use the MCP tool `import_evidence_bundle` in that session.
-
 `rea compare` compares records by Evidence identity and explicit pairs. It does
 not read artifact contents: the inventories of two builds are unresolved
 records, or one opaque change when you pair them. Use `compare-artifacts`,
@@ -769,8 +763,8 @@ protection still applies. A genuine pathname refusal uses `resource_constraint`
 with `details.reason: path-limit` and `boundary: filesystem-path`.
 
 For application traces and version comparisons, see
-[JavaScript application workflows](../guides/javascript/javascript-application-workflows.md).
-MCP [retained Evidence references](../reference/mcp-contracts.md#retained-application-evidence-inputs)
+[JavaScript application workflows](javascript-application-workflows.md).
+MCP [retained Evidence references](mcp-contracts.md#retained-application-evidence-inputs)
 belong to one connection. Separate CLI calls can consume full saved records or
 resolve exact retained IDs from an explicitly selected local bundle:
 
@@ -978,23 +972,23 @@ for percent signs, query marks and fragments.
 Historical-source import requires safe no-follow file opens on Linux or
 macOS. Native Windows returns `unsupported_host`; use Linux REA inside WSL
 or another supported host. See
-[source-to-bundle comparison](../guides/javascript/javascript-application-workflows.md#historical-source-to-bundle-comparison)
+[source-to-bundle comparison](javascript-application-workflows.md#historical-source-to-bundle-comparison)
 for mapping identities, inferences and unknowns.
 
 ## Capture runtime behavior
 
 Choose the guide for the target and intended interaction:
 
-- [Browser observation](../guides/web/browser-observation.md): inspect a selected page through CDP.
-- [Browser scenarios](../guides/web/browser-scenario-contract.md): run declared interactions and capture their results.
-- [Electron observation](../guides/javascript/electron-observation.md): inspect an Electron renderer or capture an application scenario.
-- [Electron fuses](../electron-fuses.md): read packaged fuse bytes before expecting `--inspect` to reach an Electron main process.
-- [Node/Electron Inspector](../guides/javascript/javascript-runtime-observation.md): record script locations and execution contexts.
-- [Process capture](../guides/runtime/process-capture.md): run an executable and compare terminal, exit and filesystem observations.
-- [Desktop application capture](../desktop-application-capture.md): launch a Linux desktop application and record its windows and home-directory state at checkpoints while it is used.
-- [Desktop application state](../desktop-application-state.md): read a capture folder into the application's state files, typed views of each version and kinds of change.
-- [Desktop application export](../desktop-application-export.md): write a capture folder as an agentenv computer app bundle with its class, skill and seed.
-- [Desktop application tasks](../desktop-application-tasks.md): describe how a capture's files changed, then validate an agent-written task against the capture and export it with its verifier.
+- [Browser observation](browser-observation.md): inspect a selected page through CDP.
+- [Browser scenarios](browser-scenario-contract.md): run declared interactions and capture their results.
+- [Electron observation](electron-observation.md): inspect an Electron renderer or capture an application scenario.
+- [Electron fuses](electron-fuses.md): read packaged fuse bytes before expecting `--inspect` to reach an Electron main process.
+- [Node/Electron Inspector](javascript-runtime-observation.md): record script locations and execution contexts.
+- [Process capture](process-capture.md): run an executable and compare terminal, exit and filesystem observations.
+- [Desktop application capture](desktop-application-capture.md): launch a Linux desktop application and record its windows and home-directory state at checkpoints while it is used.
+- [Desktop application state](desktop-application-state.md): read a capture folder into the application's state files, typed views of each version and kinds of change.
+- [Desktop application export](desktop-application-export.md): write a capture folder as an agentenv computer app bundle with its class, skill and seed.
+- [Desktop application tasks](desktop-application-tasks.md): describe how a capture's files changed, then validate an agent-written task against the capture and export it with its verifier.
 
 Runtime requests name the target and actions. Launched targets run with your
 user permissions; consult the chosen guide for host requirements and effects.
@@ -1033,7 +1027,7 @@ one client at a time: a session ends with the client's `DELETE`, and a client
 that connects while another session is open takes it over, so a client that
 exited without ending its session needs no restart. The listener runs until
 SIGINT or SIGTERM and does not stop when stdin closes. See
-[transports](../reference/mcp-contracts.md#transports) for the session, `Host` header and
+[transports](mcp-contracts.md#transports) for the session, `Host` header and
 shutdown contract. Client registrations written by setup and the MCP registry
 entry keep stdio.
 
@@ -1058,7 +1052,7 @@ answers every method with JSON-RPC `-32601`. The stopped document's `state`
 member is `{"served": true, "evidence_id": …}`,
 `{"served": false, "reason": "replay-only"}` or
 `{"served": false, "reason": "unavailable", "code": …, "message": …}`; see
-[serve from the state](../agent-environments.md#serve-from-the-state).
+[serve from the state](agent-environments.md#serve-from-the-state).
 
 ```sh
 rea environment-serve manifest.json --evidence capture.json --port 8765
@@ -1078,7 +1072,7 @@ MCP_ALLOWED_HOSTS=127.0.0.1,rea.lan rea environment-serve manifest.json --eviden
 the served environment; set but blank, it is refused as `configuration_invalid`
 like a blank `MCP_HOST`. The admitted client URL is written to stderr as one JSON log line
 (`"msg":"MCP transport listening"`). See
-[agent environments](../agent-environments.md) for what the state and replay
+[agent environments](agent-environments.md) for what the state and replay
 return and do not establish.
 
 ## Build an environment bundle
@@ -1103,7 +1097,7 @@ command. `--dry-run` writes nothing and may omit the directory.
 rea environment-build grafana.har ./grafana --json
 ```
 
-See [agent environments](../agent-environments.md#build-a-bundle-in-one-step)
+See [agent environments](agent-environments.md#build-a-bundle-in-one-step)
 for the report, the hints and what the bundle ships.
 
 ## Export an environment bundle
@@ -1136,7 +1130,7 @@ name Windows reserves (`con`, `nul`, `com1` and the like) is refused. The
 command prints one JSON document listing the written files with their sizes,
 the pinned package source, the served `tool_count`, and `state` in the shape
 of the serve command's stopped document. See
-[agent environments](../agent-environments.md#export-a-bundle) for the folder
+[agent environments](agent-environments.md#export-a-bundle) for the folder
 layout and what the smoke task checks.
 
 ## Compare an environment with its application
@@ -1149,7 +1143,7 @@ answer is compared with the application's after ids are mapped and clocks and ge
 makes no network call. It prints the report and exits `0`, or prints a structured `invalid_request` error and exits `1`
 for the same pair refusals as `environment-serve`, a probe that is not capture Evidence, or a browser probe captured
 without response bodies, or without the request bodies its writes need. See
-[agent environments](../agent-environments.md#measure-fidelity-against-the-application) for the report.
+[agent environments](agent-environments.md#measure-fidelity-against-the-application) for the report.
 
 ```sh
 rea environment-compare manifest.json --evidence capture.json --probe probe.json --json
@@ -1429,7 +1423,7 @@ the total token count and have no next offset.
 
 Inspect an explicit local FDT v16/v17 blob without execution or an external tool.
 Returns header, reservations, node/property tree, derived standard values and
-selected phandle references. See [devicetree inspection](../devicetree.md) for
+selected phandle references. See [devicetree inspection](devicetree.md) for
 limits and retained-view pagination.
 
 ```bash
@@ -1445,7 +1439,7 @@ rea inspect-pe-load-config /absolute/path/to/application.exe --json
 
 Reports TLS callbacks and size-covered load-config fields without execution.
 Use `--max-callbacks` and `--max-file-bytes` to set read budgets. See
-[PE TLS and load configuration](../pe-load-config.md).
+[PE TLS and load configuration](pe-load-config.md).
 
 ### Binary hardening
 
@@ -1455,9 +1449,9 @@ rea inspect-binary-hardening /absolute/path/to/program --json
 
 Reports ELF, PE, and Mach-O hardening rows without execution. A missing import
 is `unknown`, not `disabled`. Use `--max-file-bytes` to set the read budget. See
-[binary hardening](../binary-hardening.md).
+[binary hardening](binary-hardening.md).
 
 Bun standalone executables use the existing `inspect-artifact` and
 `extract-artifact` commands to inventory and materialize embedded source,
 sourcemaps and bytecode without running the executable. See
-[Bun standalone executables](../bun-standalone.md) for layout coverage and limits.
+[Bun standalone executables](bun-standalone.md) for layout coverage and limits.

docs/client-configuration.md

@@ -43,7 +43,7 @@ Rerun setup to review the registration and restart the client.
 executable and environment of the terminal running doctor. It does not launch
 the client's configured command or reproduce the client's environment. If doctor
 passes but the client disconnects, inspect the client's startup error and registered
-launcher; see [verification scope](../development/client-verification.md#launch-environment-verification).
+launcher; see [verification scope](client-verification.md#launch-environment-verification).
 
 `rea doctor` has the same limit for provider checks, and reports a provider setting
 the registration's file does not carry as a
@@ -68,7 +68,7 @@ not update an already running MCP server or desktop client.
 To select this profile for an agent, set `REA_MCP_INPUT_SCHEMA_PROFILE` in that
 client's existing REA registration `env` object (`environment` for OpenCode) and
 restart the client, preserving its other settings. A successful terminal doctor run does not verify the client's
-launch environment. See [launch-environment verification](../development/client-verification.md#launch-environment-verification)
+launch environment. See [launch-environment verification](client-verification.md#launch-environment-verification)
 and the client-specific instructions below. REA setup forwards supported selections,
 including `REA_MCP_INPUT_SCHEMA_PROFILE`, from its environment into the registration;
 it does not copy unrelated environment values. Restoring the shell's previous
@@ -83,7 +83,7 @@ raising a REA startup or operation deadline, separately ensure the client allows
 enough time for the full request. Use `inspect_analysis_settings` for the running
 server's defaults; `rea doctor` checks launch configuration and cannot observe
 another process's runtime overrides. See the
-[settings design](../design/limits-and-recovery.md) for ownership and lifetime.
+[settings design](design/limits-and-recovery.md) for ownership and lifetime.
 
 ## Client tool names and discovery
 
@@ -102,15 +102,13 @@ does not repair a client's naming behavior or infer permission drift from an
 unfamiliar prefix. The unavailable fork reported in
 [#5512](https://github.com/morluto/rea/issues/5512) has not been reverified.
 
-<a id="hotcold-catalogs"></a>
-
 ## Hot/cold catalogs
 
 For a client that supports MCP catalog refresh, set
 `REA_MCP_TOOL_CATALOG_PROFILE=hot-cold` in REA's server environment and restart
 the connection. REA then advertises a small initial catalog and loads other
 named tools through `discover_tools`. Setup preserves this explicit setting.
-See the [discovery contract](../reference/mcp-contracts.md#hotcold-catalog-discovery) for
+See the [discovery contract](mcp-contracts.md#hotcold-catalog-discovery) for
 pagination, identity and family-scope semantics.
 
 Analysis tools, including `inspect_analysis_view`, load on demand. For example,
@@ -157,7 +155,7 @@ REA_MCP_TOOL_CATALOG_PROFILE=full
 
 This advertises all tools without requiring catalog refresh. Compact output
 schemas widen client-side validation; REA still validates complete results
-against the canonical contracts. See [output schemas](../reference/mcp-contracts.md#output-schemas).
+against the canonical contracts. See [output schemas](mcp-contracts.md#output-schemas).
 
 On main `3e0599a94`, a real FastMCP 4.1.6 / Python MCP 2.3.0 HTTP client with
 the default 1 MiB SSE event limit rejected the 4,108,975-byte full catalog.
@@ -181,7 +179,7 @@ receive limits and full Evidence access still apply.
 
 Connect Fiddler Everywhere's MCP server separately for HTTP traffic debugging,
 preserving your REA client entry. See the
-[setup instructions and public skills](../guides/web/web-network-captures.md#fiddler-everywhere-mcp-and-public-skills).
+[setup instructions and public skills](web-network-captures.md#fiddler-everywhere-mcp-and-public-skills).
 
 ## VS Code
 
@@ -219,7 +217,7 @@ tool inventory on Linux using a loopback model fixture. After setup, add
 settings, then restart the client. Compact advertisements can reduce nested
 schema constraints; REA still validates complete canonical inputs. Full-profile
 `gpt-5.4` metadata is also verified locally. Live model API acceptance and
-Windows remain unverified; see [native client verification](../development/testing.md).
+Windows remain unverified; see [native client verification](testing.md).
 
 ## Claude Desktop
 
@@ -331,7 +329,7 @@ and Claude Code reports that autocompact is thrashing. To avoid this:
   override.
 - To remove entire tool families from the upfront catalog, run
   `rea setup --client claude_code --tool-families <ids>` with the families the
-  workflow needs (see [the advertising scope contract](../reference/mcp-contracts.md#tool-family-advertising-scope)).
+  workflow needs (see [the advertising scope contract](mcp-contracts.md#tool-family-advertising-scope)).
   Out-of-scope tools are not advertised and their calls fail with the SDK's
   disabled-tool error, so widen the selection when a task needs another
   family. Setup writes the scope into the entry's `env` as
@@ -348,7 +346,7 @@ Both keep canonical result validation and complete structured results; `compact`
 keeps a widened root shape and `off` advertises nothing. On catalogs large
 enough that full input schemas alone approach the frame limit, also keep the
 input profile at its `compact` default. See [MCP output schema
-profiles](../reference/mcp-contracts.md#output-schemas).
+profiles](mcp-contracts.md#output-schemas).
 
 ## Kimi Code
 
@@ -393,7 +391,7 @@ doctor reports its readiness separately. Explicit selections override discovered
 defaults, including when setup runs again with a changed selection. Unrelated
 environment variables, process ownership tokens and one-shot target paths are not
 copied. For an explicitly configured startup target, see the
-[initial-target settings](../reference/mcp-contracts.md#initial-target-at-startup). Existing
+[initial-target settings](mcp-contracts.md#initial-target-at-startup). Existing
 client environment overrides remain intact unless setup supplies the same key.
 You can edit `startupTimeoutMs` and `toolTimeoutMs` there; doctor keeps positive
 caller-selected values aligned and reports a non-blocking advisory when a tool
@@ -504,7 +502,7 @@ standalone CLI check.
 A model API's `400 INVALID_ARGUMENT` alone does not identify a rejected schema,
 tool-count limit or skill defect. Preserve the response's parameter path and
 diagnostic, the actual running REA version, Gemini CLI version and selected
-model. For schema rejection, review the [input presentation profiles](../reference/mcp-contracts.md#compact-input-schema-profile)
+model. For schema rejection, review the [input presentation profiles](mcp-contracts.md#compact-input-schema-profile)
 and reconnect after changing REA's registration environment. Compact is the
 current default; an explicitly stored `full` choice is preserved. The generic
 error in [#4620](https://github.com/morluto/rea/issues/4620) does not establish
@@ -585,7 +583,7 @@ Responses-compatible Kimi gateway as “infinite recursion”; expanding those
 references succeeded. A separate full-profile input failed the provider's
 schema-size limit. These are distinct reported failures, not proof that the
 canonical schema is recursive. Current REA inputs are already self-contained;
-see [schema advertisement](../reference/mcp-contracts.md#schema-advertisement).
+see [schema advertisement](mcp-contracts.md#schema-advertisement).
 
 For this failure, inspect the active MCP launch command and refresh the REA
 installation that command actually runs. A configured package selector or the
@@ -834,7 +832,7 @@ in `~/.agents/skills` (`$DSH_AGENTS_HOME/skills` when configured); Harness
 discovers that directory, and its native `skill` tool can load
 `reverse-engineer-anything`.
 
-REA's optional [native client verification](../development/testing.md#end-to-end-integration-and-golden-evidence)
+REA's optional [native client verification](testing.md#end-to-end-integration-and-golden-evidence)
 checks headless chat, skill loading, all tool input schemas and actual analysis
 using the installed Harness and a local model fixture. This establishes the
 Harness integration, with live DeepSeek API compatibility remaining unverified.
@@ -900,7 +898,7 @@ servers if you are adding REA to an existing configuration. `timeout_ms` is
 llama.cpp's per-tool-call timeout, including cold engine startup. The example
 allows REA's default 330-second Ghidra startup budget plus 120 seconds for the
 operation. Increase it if you configure a longer provider allowance or need more
-operation time; see [provider deadlines](../reference/mcp-contracts.md#ghidra-first-query-deadlines-and-recovery).
+operation time; see [provider deadlines](mcp-contracts.md#ghidra-first-query-deadlines-and-recovery).
 
 Start the server with your own tool-capable GGUF model:
 
@@ -935,7 +933,7 @@ keep the server local, and select targets and operations you are authorized to u
 
 See llama.cpp's [MCP server configuration](https://github.com/ggml-org/llama.cpp/blob/master/tools/server/README.md#mcp-servers)
 and [function-calling guidance](https://github.com/ggml-org/llama.cpp/blob/master/docs/function-calling.md).
-The [verification record](../development/client-verification.md#llamacpp) distinguishes connection
+The [verification record](client-verification.md#llamacpp) distinguishes connection
 checks from model behavior and lists the tested versions.
 
 ## Other client settings

docs/client-verification.md

@@ -19,7 +19,7 @@ initialization, discovery and target-free request flow; it does not verify a
 client's configured launcher or its inherited environment. Test the generated
 registration through the actual client, including a reduced `PATH` when checking
 desktop or service startup. Record the client version and launch environment
-separately from terminal doctor results. See [launcher troubleshooting](../getting-started/client-configuration.md#launchers-and-path).
+separately from terminal doctor results. See [launcher troubleshooting](client-configuration.md#launchers-and-path).
 
 ## Published Pi code-mode renderer limit
 
@@ -33,7 +33,7 @@ shared form would leave later fields unknown instead. The existing
 its character limit by advertising reduced nested validation structure, while
 REA continues to validate calls against the complete canonical input schema.
 Compact is the default for the server's advertised inputs; an explicit `full`
-choice is preserved. See the [compact input schema profile](../reference/mcp-contracts.md#compact-input-schema-profile)
+choice is preserved. See the [compact input schema profile](mcp-contracts.md#compact-input-schema-profile)
 for details of its reduced forms.
 
 Custom renderer hosts can raise `inputMaxChars` through `renderToolSignature` or
@@ -47,7 +47,7 @@ and [renderer usage notes](https://github.com/earendil-works/pi/blob/b45e0ebcc5a
 
 ## llama.cpp
 
-The [manual stdio connection](../getting-started/client-configuration.md#llamacpp) was checked on
+The [manual stdio connection](client-configuration.md#llamacpp) was checked on
 macOS arm64 with Node.js 24.18.0, llama-server b11715 (`9d1878a43`), and the
 published `[email protected]` package. `GET /tools` exposed 207 REA tools without
 enabling llama.cpp's built-in tools. With the source checkout at `9e372c6`, all
@@ -486,7 +486,7 @@ existing static JavaScript analysis through CLI and stdio MCP, including
 manifest readback, competing query variants, and resolved relative imports.
 It uses an installed browser and accepts an optional installed REA entrypoint.
 The complete `verify:browser` lane also exercises passive script export through
-both public adapters. See [website script export](../guides/web/website-script-export.md).
+both public adapters. See [website script export](website-script-export.md).
 
 `verify:browser:modules` compares CLI and stdio MCP traces against an independent
 real Chromium module-loading fixture: import-map scopes, package prefixes,
@@ -494,7 +494,7 @@ null/backtracking rejection, query/fragment identities, repeated module instance
 lazy and computed unknowns, exact source/map identities and no implicit refetch.
 Set `REA_BROWSER_EXECUTABLE`; the optional script argument selects an installed
 package entrypoint. The complete `verify:browser` lane and existing conditional
-Chrome CI include this verifier. See [module relationships](../guides/web/website-module-trace.md).
+Chrome CI include this verifier. See [module relationships](website-module-trace.md).
 
 ## Agent evaluation and conformance records
 

docs/design/limits-and-recovery.md

@@ -3,7 +3,7 @@
 This guide explains the runtime settings design for maintainers and developers:
 who owns each value, when an update takes effect, how providers enforce it, and
 how to extend the system. The public tool contract is in
-[MCP contracts](../reference/mcp-contracts.md#editable-analysis-settings); recorded runtime
+[MCP contracts](../mcp-contracts.md#editable-analysis-settings); recorded runtime
 checks and their limitations are in the
 [verification report](../verification/runtime-analysis-settings.md).
 
@@ -399,7 +399,7 @@ application points, and resulting behavior. Check that adapters deliver the
 canonical recovery guidance, with independent assertions for its underlying
 facts. Avoid freezing prose or deriving all expected values from the same
 registry used by the implementation; either can hide the wrong failure.
-See [test design](../development/testing.md#test-design-and-pruning) for the assertion policy.
+See [test design](../testing.md#test-design-and-pruning) for the assertion policy.
 
 Runtime checks cover atomic validation, stale writes, reset, runtime isolation,
 accepted-operation snapshots, and explicit argument precedence. Public MCP

docs/desktop-application-export.md

@@ -310,8 +310,8 @@ entry it does not read. The module reads the central directory itself, as REA
 does, and shows `zipfile` only the records it lists, reading each entry in
 bounded chunks no further than a byte past its declared size. A JSON file
 holding a number JavaScript cannot read exactly, such as an integer above 2^53,
-or whose retained value nests more than 500 levels deep, gets an `error` instead of a view, as in
-REA. Duplicate keys keep their last value before the depth check. Text that is not one JSON
+or nested more than 500 levels deep, gets an `error` instead of a view, as in
+REA, while text that is not one JSON
 document, such as JSON Lines, stays text. Format detection follows REA's
 rules. Files larger than 64 MiB get an `error` instead of a view
 and are not read. XML is read with Python's `expat` twice: with namespace

docs/development/documentation.md

@@ -1,82 +0,0 @@
-# Documentation ownership and authoring
-
-Use the [documentation directory](../README.md) to find existing material before
-adding another guide. Preserve one canonical owner for each contract or workflow;
-link to that owner instead of copying its claims into several guides.
-
-## Choose a destination
-
-| Document                                                 | Destination                            |
-| -------------------------------------------------------- | -------------------------------------- |
-| Installation, client setup and first CLI/MCP steps       | `docs/getting-started/`                |
-| Analyst workflows and evidence interpretation            | `docs/guides/<domain>/`                |
-| Analysis-engine configuration and format prerequisites   | `docs/providers/`                      |
-| Shared runtime contracts and evidence semantics          | `docs/reference/`                      |
-| Development, testing, release and authoring instructions | `docs/development/`                    |
-| Composition diagrams                                     | `docs/architecture/`                   |
-| Compatibility changes for a released version             | `docs/migrations/`                     |
-| One feature specification, plan and tasks                | `docs/specs/<domain>/<feature-slug>/`  |
-| One architectural decision                               | `docs/adr/<domain>/<decision-slug>.md` |
-
-Use meaningful, lowercase domain and feature slugs. Global numeric prefixes are
-unnecessary: different domains can add features independently, and branches do
-not compete for the next sequence number. Check the existing domain directory
-and linked issues before creating a feature with the same slug.
-
-Guides describe existing behavior and limitations. Specs define one proposed
-feature or domain change; an existing guide does not become a specification by
-moving it into `specs/`.
-
-## Feature lifecycle
-
-Create the specification before implementation. Each feature directory contains:
-
-- `spec.md`: problem, desired behavior, requirements, acceptance and non-goals.
-- `plan.md`: the single implementation plan, contracts and architectural choices.
-- `tasks.md`: incremental, testable steps linked to requirements and verification.
-
-Split independent domains or separately reviewable features before writing their
-specs. A broad `ROADMAP.md`, when useful, only lists child specifications, order
-and dependencies; requirements and implementation tasks belong to each child.
-Cross-repository contracts have one producer-owned specification. Consumers link
-to that contract instead of maintaining competing copies.
-
-Record an isolated architectural decision separately in
-`docs/adr/<domain>/<decision-slug>.md`, with **Status**, **Context**,
-**Decision** and **Consequences**. Link the ADR from affected specifications.
-Do not create decision records for routine file moves or invent past decisions.
-
-Specs do not replace the contribution-scope decision required for a new provider
-or expanded execution authority. Follow
-[contribution scope](https://github.com/morluto/rea/blob/main/CONTRIBUTING.md#contribution-scope).
-
-## Links and public routes
-
-Use relative links to physical Markdown files so GitHub readers can follow them.
-Link repository files outside `docs/` with their full GitHub URLs. Preserve
-existing heading anchors when moving a guide.
-
-[`documentation.ts`](https://github.com/morluto/rea/blob/main/docs/.vitepress/documentation.ts)
-owns categorized site navigation and the existing guides' stable public routes.
-Update it when adding or moving a guide. VitePress rewrites categorized sources
-to the existing public paths; its Markdown hook resolves repository links from
-the physical source and renders them against those public routes. Keep basenames
-and route assignments unique. Edit links use the physical source file.
-
-For a move, search for both the basename and its old full path. Update README
-translations, authored skills, verification instructions, documentation-fact
-readers and release configuration when they consume that path. Preserve
-historical release records and references bound to earlier commits or tags.
-
-## Generated ownership and checks
-
-The [documentation directory](../README.md#machine-owned-documentation) identifies
-the machine-owned outputs and their producers. Their existing paths are retained
-because scripts, package consumers and release history depend on them. Change
-canonical sources and regenerate; do not fix a generated projection by hand.
-
-Run `npm run docs:check` for documentation facts and generated consistency, and
-`npm run verify:docs:routes` to build the complete production site and check local
-links, anchors and physical edit targets.
-When a physical path moves, also run the tests that read it. Follow
-[development checks](testing.md#developer-commands) before requesting review.

docs/electron-observation.md

@@ -6,7 +6,7 @@ Disconnecting the inspection's page session can clear caller-owned
 `navigator.platform` emulation inside Chromium. REA cannot restore another
 client's complete user-agent/client-hint configuration. Use a disposable target
 or let the owning client reapply its configuration; see the shared
-[CDP state limitation](../web/browser-observation.md#provider-authorities).
+[CDP state limitation](browser-observation.md#provider-authorities).
 
 This passive runtime surface is distinct from the target-free static
 [`analyze_javascript_application`](javascript-artifact-reconstruction.md)
@@ -14,7 +14,7 @@ workflow. Static analysis reads a local ASAR or extracted directory without
 executing application code. Passive observation inspects an existing Electron
 page. The results keep static inferences and runtime observations distinct.
 Packaged fuse state is a separate static read:
-[`inspect_electron_fuses`](../../electron-fuses.md) reports whether this binary will
+[`inspect_electron_fuses`](electron-fuses.md) reports whether this binary will
 honor Inspector flags, `ELECTRON_RUN_AS_NODE`, embedded ASAR integrity, and
 `app.asar`-only loading.
 Use the separate
@@ -328,7 +328,7 @@ budget used by static ASAR reads: 16 MiB / 16777216 bytes by default, seeded by
 `update_analysis_settings` can override `asar.max_header_bytes` for new
 operations without restarting REA. Cached headers are checked against each
 operation's admission, including after a decrease. See the
-[settings design](../../design/limits-and-recovery.md#failure-and-retry).
+[settings design](design/limits-and-recovery.md#failure-and-retry).
 An oversized header is
 not parsed; selecting a member path does not bypass admission, and the page
 stays unauthorized. The header cache separately retains at most that many bytes

docs/esp-image.md

@@ -23,7 +23,7 @@ and consider setting both `REA_MCP_INPUT_SCHEMA_PROFILE` and
 advertised output schema to 4,096 bytes by relaxing nested client validation;
 REA still validates complete results against the canonical contracts. Pair
 this with retained summaries and selected inventory views to limit the context
-needed for one question. See [MCP contracts](reference/mcp-contracts.md) for the profiles
+needed for one question. See [MCP contracts](mcp-contracts.md) for the profiles
 and their client compatibility tradeoffs.
 
 The layout facts follow ESP-IDF v6.1 (`esp_app_format.h`, `esp_app_desc.h`,

docs/firmware-analysis.md

@@ -11,7 +11,7 @@ select a returned ELF separately for supported Ghidra analysis.
 
 On Linux, Binwalk and Unblob run as REA-owned processes and require a
 procps-compatible `ps` on REA's `PATH`; see the shared
-[Linux process prerequisite](../../getting-started/installation.md#linux-owned-process-prerequisite).
+[Linux process prerequisite](installation.md#linux-owned-process-prerequisite).
 
 ## Compare stored firmware components
 
@@ -21,7 +21,7 @@ For supported FIT and legacy uImage containers, use the built-in
 Unblob or extraction: exact logical paths, stored-byte hashes and declared
 metadata establish component changes, with source Evidence and explicit unknowns.
 The outer container at `.` is separate from its children. See the
-[FIT version comparison recipe](../../fit-images.md#comparison) for CLI,
+[FIT version comparison recipe](fit-images.md#comparison) for CLI,
 MCP, summary delivery and selected supporting facts. Its real-data verification
 covers a pair of OpenWrt FIT releases; it does not establish comparison of
 decoded root filesystems or arbitrary firmware formats.
@@ -209,7 +209,7 @@ Select a verified native child for the existing tools:
 
 Then use `analyze_function`, `inspect_native_api` or the other native primitives.
 Native architecture and executable validation still apply. Generic
-[MIPS ELF](../../providers/ghidra-mips.md) and [RISC-V ELF](../../providers/ghidra-riscv.md) lanes are separate
+[MIPS ELF](ghidra-mips.md) and [RISC-V ELF](ghidra-riscv.md) lanes are separate
 documents with their own admission boundaries. This milestone does
 not add PPC decompilation, raw flash load profiles, bootloader/device
 tree semantics, vulnerability scanning, emulation or hardware runtime capture.
@@ -317,7 +317,7 @@ bootloader image, such as an OTA download or app partition, for its chip,
 classified segments, checksum and SHA-256 results, descriptor and Secure Boot
 v2 signature blocks. `extract-artifact` / `extract_artifact` writes one file
 per segment and signature block. Reading is portable and needs no external
-tool. See [ESP images](../../esp-image.md).
+tool. See [ESP images](esp-image.md).
 
 ## Inspect ESP flash dumps
 
@@ -328,11 +328,11 @@ facts for the bootloader and each app partition, and the OTA records with a
 derived selection; the running partition stays unknown. Extraction writes
 each partition, `nvs_keys` included, as an ordinary file. For a dump that
 does not start at flash address 0, select `esp-flash-image` with
-`flash_offset`. See [ESP flash images](../../esp-flash-image.md).
+`flash_offset`. See [ESP flash images](esp-flash-image.md).
 
 ## Inspect extracted devicetrees
 
-Use [`inspect_devicetree`](../../devicetree.md) / `rea inspect-devicetree` on an
+Use [`inspect_devicetree`](devicetree.md) / `rea inspect-devicetree` on an
 extracted DTB for its node/property tree, reservations, hardware summary and
 selected phandle relationships. FDT v16/v17 inspection is portable and requires
 no external tool or disassembler.
@@ -343,7 +343,7 @@ Use `inspect-artifact` / `inspect_artifact` on an Intel HEX or Motorola S-record
 file for its address regions, declared start address and record facts, then
 `extract-artifact` / `extract_artifact` for one raw file per region. Decoding is
 portable and requires no external tool. See
-[Intel HEX and S-record images](../../hex-records.md).
+[Intel HEX and S-record images](hex-records.md).
 
 ## Inspect U-Boot legacy uImages
 
@@ -356,7 +356,7 @@ is extractable as `payload.bin`, and multi-file and script images additionally
 expose each sub-image as `image-<n>.bin` from the stored size table. Declared
 addresses are facts from the header, not proven entry points, and compressed
 payloads stay as stored. Intel HEX/S-record and FIT images are separate
-readers and are not covered here. See [U-Boot legacy uImage](../../uimage.md) for
+readers and are not covered here. See [U-Boot legacy uImage](uimage.md) for
 component padding, preserved names, resource policies and verification scope.
 
 ## Inspect UF2 and DfuSe images
@@ -366,7 +366,7 @@ address regions and its block numbering, or on a DfuSe file for its targets,
 elements and DFU suffix, then `extract-artifact` / `extract_artifact` for one
 raw file per region or element. A DfuSe suffix CRC mismatch follows
 `integrity_policy`. Decoding is portable and requires no external tool. See
-[UF2 and DfuSe images](../../uf2-dfuse.md).
+[UF2 and DfuSe images](uf2-dfuse.md).
 
 ## Inspect U-Boot FIT images
 
@@ -374,4 +374,4 @@ Use `inspect-artifact` / `inspect_artifact` on a U-Boot FIT (`.itb`) for its
 images, declared load and entry addresses, configurations and verified hashes,
 then `extract-artifact` / `extract_artifact` for one raw file per image.
 Decoding is portable and requires no external tool. See
-[U-Boot FIT images](../../fit-images.md).
+[U-Boot FIT images](fit-images.md).

docs/ghidra-mips.md

@@ -79,7 +79,7 @@ separate ABI flags record, FP attribute values are admitted only when absent,
 recordless profile. Parsed values are retained in the MIPS analysis profile.
 A carved ELF whose section header table extends beyond the captured file is
 refused when the target is opened, before provider selection, as is every ELF
-declaration beyond EOF ([installation](../getting-started/installation.md#ghidra)). The refusal
+declaration beyond EOF ([installation](installation.md#ghidra)). The refusal
 names the declared range and the file size. It applies even when a
 program-header ABI record was captured: an uncaptured section header could
 carry an unsupported or conflicting declaration, so the captured bytes are not

docs/ghidra-nativeaot.md

@@ -8,7 +8,7 @@ labels, functions, or memory bytes. The hydration semantics are adapted from
 `effeb734fc570c32650f88b159608979dc7b423e` (MIT), cross-checked against
 .NET's `MethodTable.h` at runtime commit
 `a3b2d40328be0be3f8dd43f0e5cc925b8827b044` (MIT). The required notice ships in
-[`licenses/nativeaot-parser-MIT.txt`](https://github.com/morluto/rea/blob/main/licenses/nativeaot-parser-MIT.txt).
+[`licenses/nativeaot-parser-MIT.txt`](../licenses/nativeaot-parser-MIT.txt).
 
 The optional headless Ghidra adapter remains available for database annotations
 and broader recovery. It uses the same pinned upstream commit as an opt-in
@@ -158,7 +158,7 @@ does not imply that ordinary native disassembly/decompilation is impossible.
 
 ## Verification
 
-See [the dedicated lane](../development/testing.md#optional-nativeaot-ghidra-analysis).
+See [the dedicated lane](testing.md#optional-nativeaot-ghidra-analysis).
 Fixtures are source-built benign .NET programs with inheritance, an interface,
 virtual dispatch, representative arithmetic and frozen strings. Independent
 compiler/linker symbols and raw directory bytes provide the oracle. Stripped

docs/ghidra-provider.md

@@ -5,7 +5,7 @@ read-only analysis and atomic function-name/entry-comment edits; Windows P0 is
 read-only. GUI controls and writes to caller-selected source databases are unavailable.
 Executable bytes remain unchanged.
 
-An opt-in [owned Program checkpoint](../getting-started/installation.md#automatically-checkpoint-an-owned-ghidra-program)
+An opt-in [owned Program checkpoint](installation.md#automatically-checkpoint-an-owned-ghidra-program)
 retains analysis across Linux/macOS processes. It saves initial completed analysis
 and normal-close metadata changes to `REA_GHIDRA_CHECKPOINT_DIR`; cancellation
 and process failure recover only the last successfully saved state. The restored
@@ -14,16 +14,16 @@ keeps one stable generation through its first save; later saved states bind thei
 content digest in profile identity. Restoration does not turn prior
 database state into a fresh discovery. The default remains ephemeral.
 
-Use [installation](../getting-started/installation.md#ghidra) for supported hosts, prerequisites,
+Use [installation](installation.md#ghidra) for supported hosts, prerequisites,
 configuration, startup deadlines, resource controls, and cleanup recovery.
-[Linux Ghidra launches](../getting-started/installation.md#linux-owned-process-prerequisite) also
+[Linux Ghidra launches](installation.md#linux-owned-process-prerequisite) also
 require a procps-compatible `ps` on REA's `PATH` for process ownership checks.
 [Windows P0](windows-ghidra-p0.md) has its own admission and lifecycle boundary;
 [NativeAOT observations](ghidra-nativeaot.md) include a built-in read-only PE
 snapshot parser and a separate optional annotation extension. Check the
-[release boundary](../getting-started/installation.md#released-package-and-main) when using npm.
+[release boundary](installation.md#released-package-and-main) when using npm.
 
-See [import language and analysis seeds](../getting-started/installation.md#ghidra-import-language-and-analysis-seeds)
+See [import language and analysis seeds](installation.md#ghidra-import-language-and-analysis-seeds)
 to override the header-detected language or seed analysis. An override that conflicts with a fixed raw, DOS, PSP, MIPS, RISC-V or GameCube DOL import
 is a configuration error naming the conflicting settings. It does not make an
 otherwise admitted target unsupported; REA preserves the requested settings.
@@ -52,7 +52,7 @@ not clear it or alter session readiness. Log paths refer to the owned ephemeral
 runtime and are removed by normal cleanup.
 
 Provider selection and profile identity follow
-[MCP contracts](../reference/mcp-contracts.md#identity-and-discovery). One deep
+[MCP contracts](mcp-contracts.md#identity-and-discovery). One deep
 provider stays bound to the target; runtime failure never selects another
 provider automatically. The contracts below describe Ghidra observations,
 not equivalence with another engine's pseudocode or analysis database.
@@ -89,13 +89,6 @@ does not prove text is absent. Both list and search Evidence carry this
 limitation. When an address is known, use `read_bytes` and `xrefs` to inspect
 bytes and references.
 
-String searches and `trace_feature` retain each matched row's Ghidra-reported
-encoding, termination and byte length. These describe the database's defined
-data, not independent proof of the original source encoding. Procedure searches
-and trace matches likewise retain Ghidra's external and thunk classification.
-The Ghidra analysis profile identifies this search projection, so older
-snapshots with unqualified search rows cannot replay under the new profile.
-
 ## PE debug-symbol coverage
 
 The post-analysis handshake reports Ghidra's PDB Program Information attributes:
@@ -140,11 +133,6 @@ also accept source-file byte offsets. Existing symbols and analysis addresses
 take precedence; a `0x`-prefixed number that resolves to no procedure falls back
 to its observed source mapping. Use `--file-offset=0x...` on the CLI or
 `procedure: "file-offset:0x..."` through MCP to select file coordinates explicitly.
-To select an analysis address without the bare-hex fallback, qualify it with its
-Ghidra address space, for example `ram:0x...`. The `inspect-native-load-image`
-CLI command or MCP `inspect_native_load_image` reports Ghidra's observed default
-address space; use the space appropriate to the address, and retain any
-load-image verification limitations.
 Multiple mapping candidates fail as ambiguous rather than selecting a bank or
 address space. A successful conversion retains the file offset, mapped address
 and procedure entry in raw Evidence and `locations`.
@@ -276,21 +264,9 @@ Runtime updates apply to newly accepted operations on the existing Program.
 They preserve accepted budgets and do not clear cleanup blockers or change the
 client deadline. Transient decompile timeout failures remain uncached so the
 same function can be retried after raising the limit. See the
-[settings design](../design/limits-and-recovery.md) for snapshots, precedence,
+[settings design](design/limits-and-recovery.md) for snapshots, precedence,
 and provider integration.
 
-When `inspect_native_instruction` selects a byte inside a listed instruction,
-`containing_instruction` reports its separate start, length and Ghidra Listing
-text, retaining any non-default address space. The requested address remains
-unchanged, and a containing function may be absent. For defined data, the same
-tool reports its containing object's start, length and type path; use the start
-with `inspect_native_data_type` to inspect its layout. This does not select a
-field or union member. These are listing observations, not proof of execution or
-an alternate decode. Earlier Evidence can
-omit the field. The analysis-profile revision prevents older snapshots from
-replaying results without it; open the target without the old snapshot and save
-a fresh snapshot when needed.
-
 Function extents and instruction completeness refer to Ghidra's analyzed body.
 An inferred no-return call can terminate that body before subsequent bytes.
 Pseudocode, assembly, procedure info, instruction windows, incoming and outgoing
@@ -359,17 +335,10 @@ must be constrained.
 
 Optional `start` and `end` addresses are inclusive and select one address space.
 A match must end at or before `end`, so `end` set inside a match excludes it.
-Without bounds, loaded non-overlay memory blocks are eligible, in Ghidra address
-order, including across adjacent initialized blocks. Blocks that are not loaded
-(file parts such as `.symtab`) are listed in `searched.skipped_not_loaded`;
-loaded overlay blocks are listed separately in `searched.skipped_overlays`.
-Neither is searched by default; pass `start` or `end` in its address space to
-search it. A block that is both unloaded and an overlay is listed once under
-`skipped_not_loaded`.
-The separate overlay field changes the byte-search result contract and the
-Ghidra analysis profile. Refresh cached MCP schemas; snapshots from the older
-profile are not replayed. Previously exported Evidence remains importable as
-historical data with its original result shape.
+Without bounds, loaded memory blocks are eligible, in Ghidra address order.
+Blocks that are not loaded (file parts such as `.symtab`) and overlay blocks are
+listed in `searched.skipped_not_loaded` and are not searched; pass `start` or
+`end` in their address space to search them.
 Overlapping matches are included, including across adjacent eligible initialized
 blocks in the same address space. Gaps and excluded or uninitialized blocks break
 a search run. Each match reports its address, starting segment, unique source file

docs/ghidra-riscv.md

@@ -265,7 +265,7 @@ definitions use it.
 Ghidra 12.1.4 PUBLIC with a 64-bit JDK 21+ is required, and on macOS the release
 tree ships no host decompiler binary, so `Decompiler/os/<platform>/decompile` and
 `sleigh` must come from your own build; see
-[installation](../getting-started/installation.md#ghidra).
+[installation](installation.md#ghidra).
 
 Run `npm run verify:ghidra:riscv` with an existing Ghidra 12.1.4 installation,
 JDK 21+, and a RISC-V-capable Clang, LLD, LLVM readelf and LLVM objdump. The

docs/go-binaries.md

@@ -196,7 +196,7 @@ the same virtual alignment are searched once; partially overlapping spans
 consume the cumulative search budget
 and fail with a CPU resource constraint when it is exhausted. Oversized results
 fail without partial success. MCP also applies
-its [response transport budget](../../reference/mcp-contracts.md), which counts both text and
+its [response transport budget](mcp-contracts.md), which counts both text and
 structured content; a report within the metadata limit can still require export
 from retained Evidence. These limits are not operating-system memory or CPU
 isolation.

docs/ida-provider.md

@@ -245,7 +245,7 @@ Complete body ranges, typed reference edges, CFG, referenced data, source locals
 
 ## Verification
 
-Run `npm run verify:ida -- --target /absolute/path/to/program --procedure main` with a configured upstream server. It exercises production CLI and MCP tools, validates their output contracts and Evidence, checks original-input preservation and session cleanup, and keeps local target data out of its console summary. Supply `--package-root` to verify an extracted or installed package. See [testing](../development/testing.md) for the distinction between adapter tests and real-provider evidence.
+Run `npm run verify:ida -- --target /absolute/path/to/program --procedure main` with a configured upstream server. It exercises production CLI and MCP tools, validates their output contracts and Evidence, checks original-input preservation and session cleanup, and keeps local target data out of its console summary. Supply `--package-root` to verify an extracted or installed package. See [testing](testing.md) for the distinction between adapter tests and real-provider evidence.
 
 Native verification requires `--second-procedure other_function --second-marker unique_second_body_text`; these options remain optional for the other profiles. The marker must occur in the second function's pseudocode and be absent from the first; the verifier also checks that returning to the first restores its text.
 

docs/il2cpp-metadata.md

@@ -148,7 +148,7 @@ rea inspect-analysis-view /tmp/metadata-query.json --json
 ```
 
 Use the exported Evidence with the CLI's inline Evidence source format described
-in [CLI and Evidence](getting-started/cli.md#run-a-command). Compact delivery requires
+in [CLI and Evidence](cli.md#run-a-command). Compact delivery requires
 `--evidence_output`; existing files are never overwritten. The full export
 preserves every decoded row for subsequent queries without the original file.
 
@@ -482,7 +482,7 @@ Native address queries batch exact 64-bit hexadecimal `addresses` and `states` (
 ## Ghidra function names
 
 The CLI can turn a linked report into a
-[`REA_GHIDRA_SEED_FILE`](getting-started/installation.md) so Ghidra names every IL2CPP method
+[`REA_GHIDRA_SEED_FILE`](installation.md) so Ghidra names every IL2CPP method
 before auto-analysis:
 
 ```bash
@@ -553,7 +553,7 @@ report to 64 MiB, checking row counts before allocation and JSON/UTF-8/base64 ex
 decoding, before serialization. Names and identical literal spans are decoded
 once within one stable file snapshot; no filesystem results are cached across
 inspections. Ownership assignment also yields to cancellation. MCP also applies its
-[response transport budget](reference/mcp-contracts.md); a complete report within the
+[response transport budget](mcp-contracts.md); a complete report within the
 report limit can still require the summary and paging path.
 
 ## Outside this tool
@@ -566,8 +566,8 @@ report limit can still require the summary and paging path.
 - Full method signatures beyond the rendered field, parameter and return type
   names, and type names for metadata version 27.
 - Running Ghidra or another disassembler. `--ghidra-seeds` only writes a seed
-  file for [`REA_GHIDRA_SEED_FILE`](getting-started/installation.md); use the
-  [native workflow](guides/native/native-investigation.md) for native code.
+  file for [`REA_GHIDRA_SEED_FILE`](installation.md); use the
+  [native workflow](native-investigation.md) for native code.
 - Metadata versions other than 24, 27, 29, 31 and 39.
 
 Names come from the metadata file only. They do not establish which methods

docs/index.md

@@ -41,33 +41,37 @@ For a first result from an extracted JavaScript application or ASAR:
 npx -y rea-agents@latest analyze-javascript-application /absolute/path/to/app --json
 ```
 
-See [installation and setup](getting-started/installation.md) for requirements and configuration.
+See [installation and setup](./installation.md) for requirements and configuration.
 
-For runtime instrumentation, see the [Frida guide](guides/runtime/frida-instrumentation.md).
+For runtime instrumentation, see the [Frida guide](./frida-instrumentation.md).
 
 ## Choose a guide
 
-The [documentation directory](README.md) lists every guide by domain.
+| Task                                                | Guides                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     |
+| --------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
+| Identify a desktop installation                     | [Runtime candidates, evidence and follow-up files](desktop-applications.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                |
+| Inspect native functions, references, or types      | [Native binaries](native-investigation.md), [Go metadata](go-binaries.md), [Rust dependencies](rust-binaries.md), [CPython pyc files](python-pyc.md), [PE certificates](pe-certificates.md), [PE imports](pe-imports.md), [PE TLS/load config](pe-load-config.md), [ELF notes](elf-notes.md), [Binary hardening](binary-hardening.md), [Linux kernel modules](kernel-modules.md), [Apple IPS](apple-ips.md), [Erlang BEAM](erlang-beam.md), [offline ELF layout](binary-diagnostics.md), [recorded crashes](recorded-crashes.md)                                                           |
+| Select a native provider or import format           | [Ghidra semantics](ghidra-provider.md), [Windows](windows-ghidra-p0.md), [DOS](ghidra-dos.md), [raw bytes](raw-binary.md), [GameCube DOL](ghidra-dol.md), [MIPS](ghidra-mips.md), [PSP](ghidra-psp.md), [NativeAOT](ghidra-nativeaot.md), [IDA](ida-provider.md), [Kuna](kuna-provider.md), [JEB](jeb-analysis.md)                                                                                                                                                                                                                                                                         |
+| Analyze JavaScript or Electron artifacts            | [Static analysis](javascript-artifact-reconstruction.md), [tracing and comparisons](javascript-application-workflows.md), [application graph](javascript-application-graph.md), [source recovery](javascript-recovery.md)                                                                                                                                                                                                                                                                                                                                                                  |
+| Compare static JavaScript with runtime observations | [Runtime attribution](javascript-runtime-observation.md), [reconciliation](javascript-runtime-reconciliation.md), [Electron observation](electron-observation.md), [Electron fuses](electron-fuses.md)                                                                                                                                                                                                                                                                                                                                                                                     |
+| Inspect assemblies, packages, or firmware           | [Godot PCK](godot-pck.md), [UnityFS](unityfs.md), [wxapkg](wxapkg.md), [U-Boot uImage](uimage.md), [.NET](managed-code-analysis.md), [Python packages](python-packaged-applications.md), [Android](android-analysis.md), [APK signatures](apk-signature.md), [Apktool resources](apktool-resource-analysis.md), [ADB acquisition](adb-device-analysis.md), [Apple](apple-application-analysis.md), [Harmony](harmony-analysis.md), [firmware](firmware-analysis.md), [ESP images](esp-image.md), [ESP flash images](esp-flash-image.md), [WASM](wasm-artifacts.md), [EVM](evm-bytecode.md) |
+| Observe or compare a browser scenario               | [CDP observation](browser-observation.md), [scenarios](browser-scenario-contract.md), [runtime evidence](web-runtime.md), [historical captures](web-network-captures.md)                                                                                                                                                                                                                                                                                                                                                                                                                   |
+| Serve recorded behavior as an agent environment     | [Agent environments](agent-environments.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                |
+| Trace captured website source                       | [Source locations](web-source-location.md), [module traces](website-module-trace.md), [script export](website-script-export.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                            |
+| Capture and compare a command                       | [Process capture](process-capture.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      |
+| Capture a Linux desktop application in use          | [Desktop application capture](desktop-application-capture.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              |
+| Read a captured application's state                 | [Desktop application state](desktop-application-state.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |
+| Export a captured application as an environment     | [Desktop application export](desktop-application-export.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                |
+| Write and validate a task for an exported app       | [Desktop application tasks](desktop-application-tasks.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |
+| Drive a computer while building an environment      | [Desktop build computer](desktop-build-computer.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        |
+| Capture, export and witness a built environment     | [Building and witnessing](desktop-build-witness.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        |
+| Use CLI/MCP and retain evidence                     | [CLI](cli.md), [MCP contracts](mcp-contracts.md), [agent prompts](mcp-prompts.md), [obligation ledgers](reconstruction-obligation-ledgers.md)                                                                                                                                                                                                                                                                                                                                                                                                                                              |
 
-| Task                                                | Guides                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         |
-| --------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Identify a desktop installation                     | [Runtime candidates, evidence and follow-up files](desktop-applications.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    |
-| Inspect native functions, references, or types      | [Native binaries](guides/native/native-investigation.md), [Go metadata](guides/native/go-binaries.md), [Rust dependencies](rust-binaries.md), [CPython pyc files](python-pyc.md), [PE certificates](pe-certificates.md), [PE imports](pe-imports.md), [PE TLS/load config](pe-load-config.md), [ELF notes](elf-notes.md), [Linux kernel modules](kernel-modules.md), [Apple IPS](apple-ips.md), [Erlang BEAM](erlang-beam.md), [offline ELF layout](guides/native/binary-diagnostics.md), [recorded crashes](guides/native/recorded-crashes.md)                                                                                                                                                                                                                                                                                                                |
-| Select a native provider or import format           | [Ghidra semantics](providers/ghidra-provider.md), [Windows](providers/windows-ghidra-p0.md), [DOS](providers/ghidra-dos.md), [raw bytes](providers/raw-binary.md), [GameCube DOL](ghidra-dol.md), [MIPS](providers/ghidra-mips.md), [RISC-V](providers/ghidra-riscv.md), [PowerPC](ghidra-ppc.md), [PSP](providers/ghidra-psp.md), [NativeAOT](providers/ghidra-nativeaot.md), [IDA](providers/ida-provider.md), [Kuna](kuna-provider.md), [JEB](providers/jeb-analysis.md)                                                                                                                                                                                                                                                                                                                                                                                    |
-| Analyze JavaScript or Electron artifacts            | [Static analysis](guides/javascript/javascript-artifact-reconstruction.md), [tracing and comparisons](guides/javascript/javascript-application-workflows.md), [application graph](guides/javascript/javascript-application-graph.md), [source recovery](guides/javascript/javascript-recovery.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              |
-| Compare static JavaScript with runtime observations | [Runtime attribution](guides/javascript/javascript-runtime-observation.md), [reconciliation](guides/javascript/javascript-runtime-reconciliation.md), [Electron observation](guides/javascript/electron-observation.md), [Electron fuses](electron-fuses.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   |
-| Inspect assemblies, packages, or firmware           | [Godot PCK](godot-pck.md), [UnityFS](unityfs.md), [wxapkg](wxapkg.md), [U-Boot uImage](uimage.md), [.NET](guides/managed/managed-code-analysis.md), [Python packages](python-packaged-applications.md), [Android](guides/android/android-analysis.md), [APK signatures](apk-signature.md), [Apktool resources](guides/android/apktool-resource-analysis.md), [ADB acquisition](guides/android/adb-device-analysis.md), [Apple](guides/apple/apple-application-analysis.md), [Harmony](guides/harmony/harmony-analysis.md), [firmware](guides/firmware/firmware-analysis.md), [Device Tree](devicetree.md), [FIT images](fit-images.md), [UF2/DfuSe](uf2-dfuse.md), [Flutter](guides/android/flutter-analysis.md), [ESP images](esp-image.md), [ESP flash images](esp-flash-image.md), [WASM](guides/wasm/wasm-artifacts.md), [EVM](guides/evm/evm-bytecode.md) |
-| Observe or compare a browser scenario               | [CDP observation](guides/web/browser-observation.md), [scenarios](guides/web/browser-scenario-contract.md), [runtime evidence](guides/web/web-runtime.md), [historical captures](guides/web/web-network-captures.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           |
-| Serve recorded behavior as an agent environment     | [Agent environments](agent-environments.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    |
-| Trace captured website source                       | [Source locations](guides/web/web-source-location.md), [module traces](guides/web/website-module-trace.md), [script export](guides/web/website-script-export.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               |
-| Capture and compare a command                       | [Process capture](guides/runtime/process-capture.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           |
-| Use CLI/MCP and retain evidence                     | [CLI](getting-started/cli.md), [MCP contracts](reference/mcp-contracts.md), [agent prompts](getting-started/mcp-prompts.md), [obligation ledgers](reference/reconstruction-obligation-ledgers.md)                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              |
-
-For development, use [testing](development/testing.md), [client verification](development/client-verification.md),
-[tool design](development/tool-design.md), [admission limits and recovery](design/limits-and-recovery.md),
-and [releasing](development/releasing.md).
-[Reconstruction readiness](development/reconstruction-readiness.md) describes a development
-conformance verifier. [The 6.2 migration](migrations/migration-6.2.md) records that release's
-compatibility changes; [the roadmap](development/roadmap.md) tracks future work.
+For development, use [testing](testing.md), [client verification](client-verification.md),
+[tool design](tool-design.md), [admission limits and recovery](design/limits-and-recovery.md),
+and [releasing](releasing.md).
+[Reconstruction readiness](reconstruction-readiness.md) describes a development
+conformance verifier. [The 6.2 migration](migration-6.2.md) records that release's
+compatibility changes; [the roadmap](roadmap.md) tracks future work.
 
 ![REA inspecting a native binary in Hopper](./assets/rea-hopper-analysis.png)

docs/installation.md

@@ -3,14 +3,14 @@
 Run REA, connect your selected agents, and check the tools needed for your task.
 Setup previews configuration changes and asks for approval before applying them.
 
-| Task                               | Section                                                                                                             |
-| ---------------------------------- | ------------------------------------------------------------------------------------------------------------------- |
-| Connect an agent                   | [Start setup](#start-setup), then [review changes](#review-setup-changes)                                           |
-| Install a Claude Code/Codex plugin | [Agent plugins and marketplaces](#agent-plugins-and-marketplaces)                                                   |
-| Diagnose one task                  | [Scoped readiness checks](#check-readiness-for-your-task)                                                           |
-| Configure an analysis engine       | [Hopper](#hopper), [Ghidra](#ghidra), the [IDA guide](../providers/ida-provider.md), or [Kuna](../kuna-provider.md) |
-| Update or remove REA               | [Maintenance](#diagnose-update-and-remove)                                                                          |
-| Resolve a client-specific problem  | [Client configuration](client-configuration.md)                                                                     |
+| Task                               | Section                                                                                             |
+| ---------------------------------- | --------------------------------------------------------------------------------------------------- |
+| Connect an agent                   | [Start setup](#start-setup), then [review changes](#review-setup-changes)                           |
+| Install a Claude Code/Codex plugin | [Agent plugins and marketplaces](#agent-plugins-and-marketplaces)                                   |
+| Diagnose one task                  | [Scoped readiness checks](#check-readiness-for-your-task)                                           |
+| Configure an analysis engine       | [Hopper](#hopper), [Ghidra](#ghidra), the [IDA guide](ida-provider.md), or [Kuna](kuna-provider.md) |
+| Update or remove REA               | [Maintenance](#diagnose-update-and-remove)                                                          |
+| Resolve a client-specific problem  | [Client configuration](client-configuration.md)                                                     |
 
 ## Start setup
 
@@ -374,7 +374,7 @@ choosing an operation; it works before a target is opened, and
 `result.tool_availability` reports per-operation availability, reasons and
 client requirements for the current session state. It does not guarantee that
 a particular caller-supplied input will be valid. See
-[MCP discovery](../reference/mcp-contracts.md#identity-and-discovery).
+[MCP discovery](mcp-contracts.md#identity-and-discovery).
 
 Select the part you want to check:
 
@@ -698,7 +698,7 @@ Linux architectures; configure [Ghidra](#ghidra) there instead. REA itself runs
 Linux distribution with a recognized apt, dnf, or pacman package family, where
 an existing Hopper launcher is selected through `HOPPER_LAUNCHER_PATH`. Ghidra
 and IDA have their own provider-specific host requirements; Windows Ghidra uses
-the [experimental P0 boundary](../providers/windows-ghidra-p0.md).
+the [experimental P0 boundary](windows-ghidra-p0.md).
 
 Bazzite uses RPM packages, but REA does not install Hopper automatically on it.
 Setup skips the Hopper offer because Bazzite is outside the supported host list,
@@ -1025,7 +1025,7 @@ output-stream closure; `output_closed: false` keeps that uncertainty explicit.
 Later requests retain the known exit instead of reducing it to socket loss.
 An external GUI's helper exit does not establish that the GUI itself exited.
 For cursor navigation, string decoding, symbol-name limits, and regex matching,
-see [Hopper analysis behavior](../guides/native/native-investigation.md#hopper-analysis-behavior).
+see [Hopper analysis behavior](native-investigation.md#hopper-analysis-behavior).
 
 Closing or switching a target closes its bound Hopper document, shuts down REA's
 bridge and removes its temporary socket directory. The macOS Hopper application
@@ -1150,13 +1150,13 @@ session metadata edits leave executable bytes unchanged and are discarded on clo
 require Hopper; Windows P0 remains read-only.
 
 Windows P0 admits native x86, x86-64, ARMNT (Thumb-2) and ARM64 PE applications and DLLs,
-[DOS MZ executables](../providers/ghidra-dos.md), plus explicitly
-selected [raw NMOS 6502 images](../providers/raw-binary.md#nmos-6502) with a caller-supplied
+[DOS MZ executables](ghidra-dos.md), plus explicitly
+selected [raw NMOS 6502 images](raw-binary.md#nmos-6502) with a caller-supplied
 entry at file offset 0, on fixed local NTFS volumes. Other raw CPU families remain
 unsupported on Windows.
 The npm package bundles native Job Object ownership, protected private runtime
 DACLs, and handle-based path admission; no separate addon installation is needed.
-See the [Windows Ghidra P0 guide](../providers/windows-ghidra-p0.md) for verified scope and
+See the [Windows Ghidra P0 guide](windows-ghidra-p0.md) for verified scope and
 limitations.
 
 Extract Ghidra and install the JDK outside REA, then export absolute paths:
@@ -1199,7 +1199,7 @@ REA skill after approval. Managed registrations use the absolute selected Node o
 Bun runtime and REA entry script, including when setup ran through a package runner. Hopper
 installation remains unavailable on Windows. Setup never installs Ghidra,
 Java, or Python. It preserves valid detected Ghidra/JDK settings in agent
-registrations. See [Windows Ghidra P0](../providers/windows-ghidra-p0.md) for provider diagnostics.
+registrations. See [Windows Ghidra P0](windows-ghidra-p0.md) for provider diagnostics.
 
 The separate `rea mcp add` builtin delegates most clients to Incur's package-runner
 child launcher. Run that acquisition from a trusted directory; prefer managed
@@ -1317,7 +1317,7 @@ passes the deadline to each provider client; a startup failure is returned by th
 without exposing partial analysis. This deadline is separate from MCP transport
 initialization and the client's deadline for that individual tool call. A client
 can time out earlier even when Ghidra would complete within its startup deadline.
-See [Ghidra first-query deadlines and recovery](../reference/mcp-contracts.md#ghidra-first-query-deadlines-and-recovery)
+See [Ghidra first-query deadlines and recovery](mcp-contracts.md#ghidra-first-query-deadlines-and-recovery)
 for client options and the close/reopen recovery flow.
 
 The 330-second default can be changed on a running MCP server by setting
@@ -1370,7 +1370,7 @@ invocation instead. In MCP, `ghidra.decompile_timeout_seconds` can override the
 value for newly accepted operations on the existing Program; explicit `null`
 removes the deadline. A transient timeout remains uncached so the same function
 can be retried after an update. See the
-[settings design](../design/limits-and-recovery.md#runtime-settings-through-mcp).
+[settings design](design/limits-and-recovery.md#runtime-settings-through-mcp).
 Codex/Kimi registrations derived by `rea setup` add the selected launch value
 to the tool deadline as a single-decompile estimate; a runtime update does not
 change that registration. A bulk call can need that limit for
@@ -1558,11 +1558,6 @@ For supported header-selected MIPS ELF targets, the profile also binds the
 selected target's ELF metadata; it does not claim a fresh-import MIPS lane was
 used for the saved project.
 A matching recorded import digest does not claim that the database is unedited.
-Caller and callee coverage therefore remains unknown. A single-direction query
-with known omissions remains partial and also reports the unknown project history.
-Observed call edges are still available: a path to an observed caller or callee
-can be reached, but a missing path is unknown when the project's prior analysis
-cannot establish completeness.
 Saved REA seed/analyzer reports remain historical facts in retained source Evidence;
 they are not interpreted as overrides applied by this session.
 Project content participates in snapshot identity, so different project states
@@ -1740,7 +1735,7 @@ contains the launch arguments and `/proc/<jvm-pid>/status` reports
 session and retain the resource flags needed for the measurement rather than
 copying full command lines or environments into reports. Heap and affinity
 settings affect cost and latency; they are not part of REA's semantic analysis
-profile identity. See [real-provider testing](../development/testing.md) for bounded
+profile identity. See [real-provider testing](testing.md) for bounded
 verification workflows.
 
 ### Ghidra diagnostics and verification
@@ -1850,7 +1845,7 @@ Code, `codex plugin list` in Codex).
 For analysis engines, ask the connected server: have the agent call
 `binary_session` and read `result.tool_availability`, which reports what the
 server the plugin started can use, with reasons and remediation. See
-[MCP contracts](../reference/mcp-contracts.md).
+[MCP contracts](mcp-contracts.md).
 
 A plugin does not put `rea` on your `PATH`. To check an engine from a
 terminal, use the package runner at the version the plugin pins:

docs/javascript-application-workflows.md

@@ -180,7 +180,7 @@ large application can exceed one MCP response. Over MCP, pass
 the session and return only selected rows with the trace's identity and
 coverage. Page the retained trace with `inspect_analysis_view`; an oversized
 complete reply offers its first `paths` page as a ready-to-call continuation.
-See [MCP contracts](../../reference/mcp-contracts.md) for filters. A handoff binds
+See [MCP contracts](mcp-contracts.md) for filters. A handoff binds
 the exact native artifact digest and requested exports from the application
 graph. Trace direction selects the reachable addons; requested
 exports for each selected addon come from the complete supplied graph, so an
@@ -632,7 +632,7 @@ All six CLI commands accept inline JSON or a path to a JSON file. The CLI
 returns an Evidence record directly. Later workflow inputs can contain full
 records, or exact retained references when `--evidence-bundle PATH` selects an
 authenticated exported bundle. A separate CLI process has no retained MCP
-connection state. See [CLI Evidence reuse](../../getting-started/cli.md#import-export-and-compare-evidence).
+connection state. See [CLI Evidence reuse](cli.md#import-export-and-compare-evidence).
 
 File inputs must be regular files; symlinks to regular files are accepted.
 Directories, named pipes and device files produce an input error before JSON
@@ -665,7 +665,7 @@ References are scoped to one connection; `close_binary` clears them. Export a
 bundle before closing and import it on another connection, or supply the full
 inline Evidence there. Versions before 4.1.0 accept full inline Evidence only; installing
 newer skill instructions does not change that schema. See
-[MCP Evidence inputs](../../reference/mcp-contracts.md#retained-application-evidence-inputs).
+[MCP Evidence inputs](mcp-contracts.md#retained-application-evidence-inputs).
 
 For two operator-provided directories or ASARs, run:
 

docs/javascript-artifact-reconstruction.md

@@ -160,7 +160,7 @@ must also satisfy the new admission. For CLI or future MCP processes, set
 `REA_ASAR_MAX_HEADER_BYTES` in the launch environment. Changing that environment
 requires a new REA process. Invalid launch values are configuration errors,
 never a silent fallback. See the
-[settings design](../../design/limits-and-recovery.md#failure-and-retry) for recovery
+[settings design](design/limits-and-recovery.md#failure-and-retry) for recovery
 metadata, precedence, and reset behavior.
 
 The archive index is read before any member can be selected, so
@@ -255,7 +255,7 @@ those missing bytes. New ASAR file occurrences record `unpacked: true` for
 companion files and `unpacked: false` for packed entries, including when the
 file bytes are unavailable. An omitted flag in an older inventory remains
 unknown; it does not establish either storage mode. See
-[MCP integrity handling](../../reference/mcp-contracts.md#integrity-record-and-continue) for the
+[MCP integrity handling](mcp-contracts.md#integrity-record-and-continue) for the
 tool-result contract.
 
 JavaScript whose syntax cannot be parsed retains unavailable semantic coverage
@@ -280,7 +280,7 @@ does not bypass ASAR header/index admission.
 
 If a complete response exceeds the transport budget, use its retained Evidence
 ID for a summary, module page, or item, or export the bundle. See
-[MCP tool results](../../reference/mcp-contracts.md#tool-results) for delivery limits, export, and
+[MCP tool results](mcp-contracts.md#tool-results) for delivery limits, export, and
 matching server/client buffer settings. Follow-up results also need to fit that
 budget. [Analyzer limits](#analyzer-and-result-admission) control analysis memory,
 source deadlines, and semantic capacity separately.
@@ -306,7 +306,7 @@ and caller selection remain available without implying applicable AST work.
 
 MCP returns a `partial_observation` retained reference after recording succeeds;
 open it with `inspect_analysis_view` on the same connection. If the SDK stopped
-waiting before receiving the reply, follow [MCP cancellation recovery](../../reference/mcp-contracts.md#progress-and-cancellation)
+waiting before receiving the reply, follow [MCP cancellation recovery](mcp-contracts.md#progress-and-cancellation)
 to find the record. CLI failure output contains the complete partial Evidence.
 Owned analyzer cleanup is verified before private files are released; uncertain
 cleanup retains ownership for retry and is reported separately.
@@ -810,7 +810,7 @@ analyzer; the caller's `NODE_OPTIONS` still controls the CLI/MCP process heap.
 For defaults across new MCP operations, use `update_analysis_settings` with
 `javascript.max_heap_mb` or `javascript.analysis_timeout_ms`. Explicit per-call
 arguments take precedence, and accepted work keeps its original settings. See
-the [settings design](../../design/limits-and-recovery.md#precedence-and-lifetime).
+the [settings design](design/limits-and-recovery.md#precedence-and-lifetime).
 V8 old-space limits do not impose a process RSS limit. When REA runs on Bun,
 the analyzer ignores the V8 heap flags; resource failures then report
 `worker_heap_limit_bytes` as null instead of a requested or V8-reported limit.

docs/javascript-recovery.md

@@ -149,6 +149,6 @@ non-retryable `resource_constraint` with `resource: "file-size"` and
 valid UTF-8 is an `invalid_format` request issue. These limits apply per
 operation and do not claim aggregate host containment across concurrent callers.
 
-See [testing.md](../../development/testing.md#javascript-source-recovery) for the focused real
+See [testing.md](testing.md#javascript-source-recovery) for the focused real
 Wakaru CLI/MCP lane and its source-owned compiler fixtures. Other host platforms
 and Bun/Vue recovery are not claimed by this adapter.

docs/javascript-runtime-observation.md

@@ -37,7 +37,7 @@ application starts, and REA never resumes it or sends
 caller-owned debugger before requesting application runtime observations.
 
 For a packaged Electron app, read
-[`inspect_electron_fuses`](../../electron-fuses.md) before starting an `electron-main`
+[`inspect_electron_fuses`](electron-fuses.md) before starting an `electron-main`
 target. When `EnableNodeCliInspectArguments` is disabled or removed, Electron
 ignores `--inspect` and `--inspect-brk`. A missing main-process target after
 launch does not, by itself, show that fuse.

docs/jeb-analysis.md

@@ -68,7 +68,7 @@ All four preserve target-file bytes. `open_jeb_project` selects or creates an en
 - An unreachable endpoint is a provider-availability failure with recovery guidance; REA does not spawn the engine or automatically replay failed operations.
 - After a transport or RPC failure (including a request or catalog timeout), the next explicit call attempts a new MCP connection after cleanup succeeds. Engine version and GUI mode are refreshed for that connection. Caller cancellation and decoded engine refusal envelopes preserve the existing connection.
 
-Real-engine verification lives in the JEB lane described in [testing.md](../development/testing.md); mock transport tests do not establish real-engine compatibility.
+Real-engine verification lives in the JEB lane described in [testing.md](testing.md); mock transport tests do not establish real-engine compatibility.
 
 A project-open refusal retains the selected engine-host artifact path separately
 from the service endpoint. Discovery of an unreachable service includes the same

docs/kuna-provider.md

@@ -147,7 +147,6 @@ that rollback is resolved; a clean rollback permits another setup attempt.
 
 ## Provenance and limitations
 
-- If a completed project export reports a failed function, `procedure_pseudo_code` with `analysis: "independent_fresh"` or `rea decompile --analysis independent_fresh` requests a new single-function attempt. It bypasses the project result and prior single-function and snapshot results; it does not replace the original observation. On a cold session it obtains an inventory without starting a project export. The independent attempt can use different analysis context and may also fail. Identical results can share an Evidence ID because Evidence is content-addressed.
 - Addresses and bytes are Kuna's observations of the image. Procedure entries and extents are its derivations: extents are upper bounds clipped at the next entry, and Kuna can split one function at an entry its own analysis infers. Pseudocode is its reconstruction, never original source.
 - Pseudocode and assembly are exact Kuna text; text from Kuna and from another provider is not comparable as equal or different.
 - Results are re-read rather than replayed from REA's analysis snapshots, because a cold answer can differ from the export's.
@@ -173,7 +172,7 @@ the manifest's file identity as well as the export files. These refusal and
 migration cases are verified with controlled Kuna-format exports; they do not
 establish behavior of an independently installed Kuna release.
 
-Builds publish by one rename, so a reader sees a complete export or none. If later staging retirement fails, the typed cleanup error retains the completed export's key, directory and manifest in `published_export`. The session adopts that verified project; later queries reuse its immutable files while `project_export.cleanup_incomplete` reports the retained owner's live state. `close_binary` retries only the remaining cleanup, and a successful retry resolves prior cleanup errors. A failed export followed by failed staging cleanup retains both failures; it does not invent a publication receipt. A session keeps the export it uses from eviction only within its own REA process. If another REA process sharing the cache evicts it, the session rebuilds it; meanwhile pseudocode falls back to single-function runs. A damaged or edited export is removed and rebuilt. REA retains the file state verified with each digest, checks it before warm-cache reuse, and checks open descriptors before and after reading text. Assembly indexes are checked against the same state; a changed file makes the whole report retry rather than mixing facets from different exports. Staging moves to `trash/` for removal only after REA proves its Kuna process stopped. Staging of a process it cannot prove stopped is never swept; REA keeps it owned, retries the stop on `close_binary`, and reports it until the stop is proven; that MCP error names the same-connection retry as `recovery.kind=retry_cleanup` ([retained cleanup retry](reference/mcp-contracts.md#retained-cleanup-retry)). Failed file removal also stays bound to its export and is retried by `close_binary`; closing does not report success while that cleanup remains. `rea doctor --provider kuna` reports the cache directory without creating it.
+Builds publish by one rename, so a reader sees a complete export or none. If later staging retirement fails, the typed cleanup error retains the completed export's key, directory and manifest in `published_export`. The session adopts that verified project; later queries reuse its immutable files while `project_export.cleanup_incomplete` reports the retained owner's live state. `close_binary` retries only the remaining cleanup, and a successful retry resolves prior cleanup errors. A failed export followed by failed staging cleanup retains both failures; it does not invent a publication receipt. A session keeps the export it uses from eviction only within its own REA process. If another REA process sharing the cache evicts it, the session rebuilds it; meanwhile pseudocode falls back to single-function runs. A damaged or edited export is removed and rebuilt. REA retains the file state verified with each digest, checks it before warm-cache reuse, and checks open descriptors before and after reading text. Assembly indexes are checked against the same state; a changed file makes the whole report retry rather than mixing facets from different exports. Staging moves to `trash/` for removal only after REA proves its Kuna process stopped. Staging of a process it cannot prove stopped is never swept; REA keeps it owned, retries the stop on `close_binary`, and reports it until the stop is proven; that MCP error names the same-connection retry as `recovery.kind=retry_cleanup` ([retained cleanup retry](mcp-contracts.md#retained-cleanup-retry)). Failed file removal also stays bound to its export and is retried by `close_binary`; closing does not report success while that cleanup remains. `rea doctor --provider kuna` reports the cache directory without creating it.
 
 ## Verify with a real Kuna
 
@@ -184,7 +183,7 @@ REA_KUNA_COMMAND=/absolute/path/to/kuna GHIDRA_INSTALL_DIR=/absolute/path/to/ghi
   npm run verify:kuna -- --targets DIR --functions inflate,crc32 --compare-ghidra
 ```
 
-The lane compiles a small source-owned fixture with the host C compiler and verifies the MCP workflow end to end. `--targets DIR --functions a,b` adds caller-built binaries. `--compare-ghidra` (with `GHIDRA_INSTALL_DIR`) runs those same functions through Ghidra; it requires `--targets` and `--functions` and refuses empty matrices or requested function names missing from every target. The report lists examined caller binaries and their matching requested symbols, including inputs omitted from analysis. See [testing](development/testing.md#kuna-lane) for coverage.
+The lane compiles a small source-owned fixture with the host C compiler and verifies the MCP workflow end to end. `--targets DIR --functions a,b` adds caller-built binaries. `--compare-ghidra` (with `GHIDRA_INSTALL_DIR`) runs those same functions through Ghidra; it requires `--targets` and `--functions` and refuses empty matrices or requested function names missing from every target. See [testing](testing.md#kuna-lane) for coverage.
 
 Failed runs also report process-lineage evidence and exit unsuccessfully. If provider or transport cleanup is unconfirmed, the report says `cleanup: "incomplete"` and records `retained_workspace`; that directory is preserved for investigation and cleanup retries.
 

docs/managed-code-analysis.md

@@ -24,7 +24,7 @@ Native-body bridge mapping and managed runtime execution are outside the
 current tool set.
 
 The canonical tool inventory is the
-[build-generated catalog](../../reference/mcp-contracts.md#generated-catalog).
+[build-generated catalog](mcp-contracts.md#generated-catalog).
 
 ## Inspect an assembly
 
@@ -245,13 +245,13 @@ The canonical parser admits PE/CLI bytes and their metadata/CIL without loading
 an assembly. It reports observed implementation markers and unavailable facts;
 it does not itself unpack .NET single-file hosts or infer a NativeAOT identity
 from an ordinary native PE. It does not decode IL2CPP; use
-[IL2CPP metadata](../../il2cpp-metadata.md) for the image, type and method names in a
+[IL2CPP metadata](il2cpp-metadata.md) for the image, type and method names in a
 Unity `global-metadata.dat`. Inputs without admitted CLI metadata do not
 become managed assemblies through naming or routing guesses.
 Inspect separately obtained components explicitly and preserve their identities.
 
 For ordinary .NET single-file hosts, use the existing artifact tools to
-[inventory and extract bundle members](../../dotnet-bundles.md), then inspect the
+[inventory and extract bundle members](dotnet-bundles.md), then inspect the
 extracted assembly explicitly with the managed tools.
 
 A valid implementation marker establishes a candidate native boundary, not
@@ -608,13 +608,13 @@ describes exported shared-library entry points.
 REA offers a built-in read-only snapshot parser for x64 PE/RTR 9.1 metadata and
 an optional Linux headless Ghidra adapter for annotations and broader recovery.
 The adapter requires a locally built `REA_GHIDRA_NATIVEAOT_JAR`; REA does not
-install it or its toolchain. The [NativeAOT guide](../../providers/ghidra-nativeaot.md) defines
+install it or its toolchain. The [NativeAOT guide](ghidra-nativeaot.md) defines
 these routes, their layout/host restrictions, derived-memory provenance, and
 verification coverage.
 
 REA's experimental Windows Ghidra boundary admits native x86, x86-64, ARMNT (Thumb-2) and ARM64 PE
 applications and DLLs for static analysis. For x64 PE NativeAOT, the read-only
-parser also runs there; the [NativeAOT guide](../../providers/ghidra-nativeaot.md) lists what a
+parser also runs there; the [NativeAOT guide](ghidra-nativeaot.md) lists what a
 Windows host covers.
 
 For NativeAOT analysis, preserve the selected native artifact's path and digest
@@ -623,7 +623,6 @@ to native function addresses requires verified
 provider evidence; names or vtable similarity alone do not prove that a native
 function implements a specific managed method.
 
-<div id="managednative-boundary-rules"></div>
 <div id="managed-native-boundaries"></div>
 
 ## Managed/native boundary rules
@@ -678,7 +677,7 @@ partial when unknown MethodDef ownership can hide a selected body.
 Metadata tokens are not native addresses. Native body mapping for C++/CLI,
 ReadyToRun, NativeAOT, and IL2CPP requires separately verified format and provider
 support. The managed static tools do not recover those mappings. The optional
-[Ghidra NativeAOT extension](../../providers/ghidra-nativeaot.md) has its own supported boundary.
+[Ghidra NativeAOT extension](ghidra-nativeaot.md) has its own supported boundary.
 
 Declared import inventory supports a bounded positive claim. Its absence does
 not exclude dynamic resolution, generated code, protected code, native helpers,
@@ -850,7 +849,7 @@ Target platform is not host support. The canonical parser must inspect
 Windows-produced PE/CLI bytes on REA's supported Linux and macOS hosts with the
 same result. Pinned Windows oracle jobs may provide additional conformance, but
 do not establish that the REA managed analysis workflow has been verified on a
-Windows host. The [experimental Windows Ghidra boundary](../../providers/windows-ghidra-p0.md)
+Windows host. The [experimental Windows Ghidra boundary](windows-ghidra-p0.md)
 has its own host and provider verification scope. Native
 ReadyToRun, C++/CLI, NativeAOT, or IL2CPP coverage is additionally constrained
 by the selected Hopper/Ghidra host and format matrix.
@@ -861,7 +860,7 @@ The current lane uses source-owned byte-built fixtures and malformed-input
 regressions, with optional operator-supplied applications and ILSpy verification.
 
 Run the deterministic lane with `npm run verify:managed`. See
-[testing](../../development/testing.md#real-toolchain-verification-lanes) for prerequisites and
+[testing](testing.md#real-toolchain-verification-lanes) for prerequisites and
 coverage. Generated outputs belong outside tracked fixture directories and must
 not remain after verification or packaging.
 

docs/mcp-contracts.md

@@ -1,7 +1,7 @@
 # MCP runtime contracts
 
 For pairing native functions before comparing selected dossiers, see
-[native function matching](../native-function-matching.md). It operates on retained
+[native function matching](native-function-matching.md). It operates on retained
 inventories, preserves aliases/unknowns and exposes selected fact pages.
 
 Use this reference to call REA tools and interpret their replies on one MCP
@@ -129,15 +129,7 @@ side declares a required facet unavailable. An empty legacy facet without a
 coverage declaration is also unknown. A producer that actually observed an
 empty facet can declare it available so observed absence remains comparable.
 Call comparison additionally retains the Evidence relationship coverage
-checks. Its call status compares the provider-observed sets; discovery
-limitations stay on that dimension even when the observed sets match or differ.
-The calls dimension's `discovery_status` records whether discovery is complete,
-partial, or unknown across both sides and directions; older comparisons may omit
-it. Incomplete or unreported discovery also remains a residual unknown and an
-unresolved `find_changed_behavior` finding, including when observed sets match.
-A structural reconstruction claim about calls remains unknown unless both
-directions have established static direct-call discovery. An independent
-observed change in another dimension can still fail an overall claim. Ghidra and Hopper declare their observed dossier facets and complete
+checks. Ghidra and Hopper declare their observed dossier facets and complete
 provider-observed caller/callee sets, including empty sets. Missing decompiler
 output remains unavailable; complete call coverage does not claim every runtime
 target. When Ghidra's decompiler fails on one function, its dossier is still
@@ -214,18 +206,11 @@ relationship coverage and read-specific `limitations`, alongside observed
 `calls`. When a provider does not classify its caveats, they remain on that
 node and coverage is `unknown`. An empty call list with partial or unknown
 coverage is not proof that the function has no calls.
-`trace_call_path` reports limited relationship reads in `residual_unknowns` and
-sets `truncated: true`; any path supported by observed edges remains visible.
-`search_scope.observed_goal_status` describes the search of the provider-observed
-graph, while `search_scope.discovery` describes whether discovery of applicable
-direct relationships is established. A missing goal is `unknown` when either
-discovery or a relationship read is unestablished. A found path is shortest
-within the observed graph; undiscovered calls may produce a shorter path.
-`truncated` describes relationship reads, not unestablished discovery.
-`build_call_path` applies the same distinction to supplied function Evidence:
-its `search_scope.exhaustive` describes the supplied graph and
-`search_scope.observed_status` preserves that graph's result. Evidence without
-discovery metadata has unknown discovery. Cancellation remains a tool error.
+`trace_call_path` reports each limited expansion in `residual_unknowns` and
+sets `truncated: true`; any path already supported by observed edges remains
+visible. When a requested goal is not reached but an expansion is unresolved,
+`goal_status` is `unknown`; `not_reached` means traversal exhausted without
+unresolved relationship reads. Cancellation remains a tool error.
 
 `trace_feature` validates each reference's containing-procedure resolution using
 the same contract as navigation context. Explicit absence remains a successful
@@ -252,11 +237,10 @@ restart or recreate the server to apply changes. If a result cannot fit, REA ret
 `resource_constraint` with `details.resource: "transport"` before constructing
 a document-sized string. Analysis Evidence remains complete in the current
 session. Its exact reference is reported in
-`details.reported_limits.evidence_reference`; for supported parent operations,
-call `inspect_analysis_view` with that reference and a compatible view. To recover
-any retained record, export the complete session with `export_evidence_bundle`
-to a destination path. Complete bundle exports stream canonical JSON into an
-atomically published file.
+`details.reported_limits.evidence_reference`; call `inspect_analysis_view` with
+that reference for a summary, one section/module, or a stable page, or call
+`export_evidence_bundle` with a destination path. Complete
+bundle exports stream canonical JSON into an atomically published file.
 
 On protocol revision `2026-07-28`, completed replies retain the SDK's
 `resultType: "complete"`, including the replacement for an oversized error.
@@ -334,8 +318,6 @@ Retained `xrefs` Evidence also supports `native-observation` address pages and
 default and does not accept `detail`; when its MCP response exceeds the budget,
 follow the returned continuation to page the retained result. These addresses
 remain untyped; paging does not add reference kinds or establish completeness.
-The page tells callers that any additional provider detail recorded in the parent
-requires retrieving or exporting the complete Evidence.
 
 These views reference complete source context through `source_context.digest`
 and caveat counts. Read it using the same parent with
@@ -385,18 +367,9 @@ To discover existing records without their large payloads, call
 `get_evidence_bundle` with `detail: "summary"`. Its `result.records` contain
 Evidence IDs, artifact/provider identities, analysis-profile digests and native
 procedure metadata. Optional `filters` match exact `evidence_id`, `operation`,
-`target_sha256`, `analysis_profile_digest` or `procedure_address`. For a supported
-parent operation, use a discovered ID with a compatible `inspect_analysis_view`;
-neither discovery nor retained selection starts a provider. For records without
-a supported view, use `detail: "records"` to retrieve selected complete records,
-or export the bundle to a caller-selected path. Record and bundle delivery are
-subject to the MCP response budget. Summary rows are not complete records.
-Retained `procedure_pseudo_code` Evidence supports `summary` and
-`native`/`pseudocode` views of the original observation, including
-`view: {kind: "native", facet: "pseudocode", offset: 0, limit: 4096}`;
-pages do not start a provider or create another decompilation. An
-`analyze_function` dossier is a different observation.
-`retention: "complete-record"` describes stored Evidence, while
+`target_sha256`, `analysis_profile_digest` or `procedure_address`. Use a discovered
+ID with `inspect_analysis_view`; neither discovery nor retained selection starts
+a provider. `retention: "complete-record"` describes stored Evidence, while
 `native_dossier.value_flow` independently reports truncation, unavailable or
 unknown metadata. Missing omission counts remain null. Summary output carries
 every matching record; actual transport admission still applies. Omitted
@@ -446,18 +419,10 @@ Automatically retained workflow questions include their immutable result
 Evidence ID. Distinct results retain independent questions and source links;
 repeating the same result does not create another unknown. Workflow Evidence
 keeps the original residual question text. Explicit `record_unknown` requests
-keep caller-selected identity and reject duplicate creation. Explicit creation
-uses the active binary analysis target digest as `scope_digest`, or null when
-there is no active target. Supporting Evidence does not select the scope. Scope
-contributes to the stable unknown ID, so the same question can have different
-IDs under different scopes. Check the active target before recording a
-target-scoped unknown; creating one in a target-free session does not infer a
-target from its supporting Evidence.
+keep caller-selected identity and reject duplicate creation.
 Duplicate creation is a nonretryable `invalid_request`; use the existing head
 or update it with its current `expected_revision`. A stale update remains a
-retryable `revision_conflict`. An `update_unknown` revision keeps the unknown’s
-original `scope_digest`. Its mutation Evidence subject is the active binary
-analysis target, or null without one, so it can differ from the unknown’s scope.
+retryable `revision_conflict`.
 
 If automatic question publication fails after a workflow completes,
 `details.workflow_unknown_publication` identifies the Evidence and states
@@ -623,7 +588,7 @@ Default summaries retain complete Evidence; `api-contract` or `graphql-contract`
 views select facts immediately with exact filters, fields and paging. Retained
 `inspect_analysis_view` uses the same projector without reopening inputs.
 Coverage describes examined declarations and does not establish runtime behavior
-or full specification/operation validity. See [offline API contracts](../api-contracts.md)
+or full specification/operation validity. See [offline API contracts](api-contracts.md)
 for source identities, parser allowances, supported scope and CLI publication.
 
 ## Retained application Evidence inputs
@@ -654,7 +619,7 @@ grouping request lines by method, origin and format-rule path template. Template
 segments are inferences. Because paging follows the full grouping, every page is
 inferred Evidence whenever any group is templated, and derived Evidence only when
 no group was templated.
-See [derived API surfaces](../guides/web/web-network-captures.md#derived-api-surface).
+See [derived API surfaces](web-network-captures.md#derived-api-surface).
 
 `inspect_analysis_view` also accepts `environment-manifest` for retained HAR capture
 Evidence and `capture_browser_scenario` Evidence, projecting the primary origin's request lines into named tools with path
@@ -662,14 +627,14 @@ templates, parameters, observed query names, value-free body shapes and record
 pointers, plus excluded groups and three fixed unknowns. Templates, parameters and
 names are inferences; the Evidence is inferred whenever any tool or excluded group
 is templated, and derived otherwise.
-See [environment manifests](../guides/web/web-network-captures.md#environment-manifest).
+See [environment manifests](web-network-captures.md#environment-manifest).
 
 `inspect_analysis_view` also accepts `environment-state` for the same parents,
 extracting the initial state the recorded reads observed: entity types with an
 identity field, entities, documents for non-entity reads, and a render
 plan per read tool that reproduces its recordings from the state or names why it
 cannot. Types and identity are inferences, so the Evidence is always inferred.
-See [environment state](../guides/web/web-network-captures.md#environment-state).
+See [environment state](web-network-captures.md#environment-state).
 
 `inspect_analysis_view` projects a caller-selected view of already completed
 `inspect_binary_layout`, `analyze_javascript_application`, or `analyze_function`
@@ -680,14 +645,7 @@ and limit default to 0 and 64; pseudocode uses UTF-16 code units and never
 splits surrogate pairs, while other pages count rows. Unavailable facts and
 provider limitations remain explicit. Source is
 an exact same-session retained reference, portable inline Evidence, or an
-Evidence record or bundle file. When Evidence retention is available, inspecting
-a caller-supplied inline or file source retains the resulting view in the active
-MCP session; it does not automatically retain the caller-owned parent. To use
-`parent_evidence_id` in later retained queries, import a bundle containing the
-parent into that session. Alternatively, supply the inline or file source again
-for each view; doing so does not make the parent available for retained lookup.
-An embedded or fixed-target server without a session does not retain the view;
-keep the returned Evidence if it is needed later. Native function, inventory, and observation
+Evidence record or bundle file. Native function, inventory, and observation
 views require the `rea.analysis` predicate; function-matching views require
 `rea.native-function-matching`. A mismatched predicate returns an
 `invalid_request` identifying `source.predicate_type`. Views are
@@ -938,7 +896,7 @@ CLI workflows that advertise `--evidence-bundle` can resolve the same reference
 JSON from one explicitly selected local bundle, including an MCP export. They
 also accept portable inline Evidence and use the same application workflows.
 A standalone CLI invocation cannot resolve another MCP connection's ledger
-without that exported bundle. See [CLI Evidence reuse](../getting-started/cli.md#import-export-and-compare-evidence)
+without that exported bundle. See [CLI Evidence reuse](cli.md#import-export-and-compare-evidence)
 for the supported commands. No additional lookup call, provider selection, or
 approval step is required for a same-session follow-up.
 CLI `inspect-artifact` continues to return complete portable Evidence. Save that
@@ -990,6 +948,13 @@ from an older request does not override a newer outcome. Request deadlines and
 cancellations neither mark nor clear availability. A new provider client starts
 without these outcomes.
 
+Standalone command operations (such as `inspect_with_objdump` and
+`execute_rizin_command`) similarly reflect observed executable launch failures:
+an unprobed executable is reported available; once a launch failure is observed,
+discovery reports the operation unavailable with the executable remediation
+until a request for it dispatched later succeeds. Direct retry remains available
+without restarting REA.
+
 `detail` selects the projection and the result echoes it. The default
 `summary` keeps open state, target identity, the binding, current-route
 `capabilities`, run, activity and health status, and each provider candidate's
@@ -1014,18 +979,6 @@ finish without reading relationships, even when neither traversal mode is
 available. Discovery does not block that direct invocation or replace its typed
 partial/error outcomes.
 
-`trace_native_values` includes `value_flow_support` for the provider routed to
-`analyze_function`. `supported` declares that the provider may supply value flow;
-it does not guarantee a model for the selected function. `unavailable` includes
-the provider's reason, and `unknown` means no declaration. The provider ID is
-preserved, or null if no analysis provider is routed. This declaration is separate
-from operation readiness and the availability of call-target resolution. When
-call-target resolution is missing, a direct trace may still return a local graph
-with call-resolution unknowns; even `max_depth: 0` attempts to resolve call sites.
-When support is unknown but the declared operation prerequisites are ready,
-availability can still be true; it does not promise that value flow is present.
-The trace's returned observations and unknowns remain authoritative for that call.
-
 `trace_native_ui_action` reports authored-UI and native-seed modes separately.
 Apple dispatch metadata requires a Mach-O target; another provider may supply
 the symbol-only alternative on other formats. If neither mode is available,
@@ -1066,20 +1019,8 @@ limitations. An unavailable group carries `remediation` when its readiness
 owner supplied a repair instruction; `tool_availability` uses that instruction
 rather than the failure description.
 
-`binary_session.analysis_provider_candidates` reports deep-engine discovery.
-`analysis_provider_candidates_observed` is `target_selection` when those facts
-were retained from the active target's selection, `status_request` when the
-status request sought candidate observations, and `not_applicable` for resource-only
-sessions. Selection-time readiness may have changed since the target was opened.
-Set `refresh_candidates: true` to inspect candidate readiness and target support
-again without replacing the active binding or engine. That does not resolve a
-new analysis profile or start a provider client. Later transitions and analysis
-calls wait for the inspection to finish, including cleanup. Current-route capabilities
-remain those of the bound session. Candidate statuses can still be unknown when
-an inspection cannot complete.
-`open_binary` with an explicit `provider_id` performs a new selection. Reopening
-the same target without `provider_id` reuses its current route. A changed route
-can retire the previous engine and its ephemeral edits. Each candidate's capability sets, returned with complete detail,
+`binary_session.analysis_provider_candidates` is authoritative for deep-engine
+discovery. Each candidate's capability sets, returned with complete detail,
 describe that possible provider;
 they do not select it. The top-level `capabilities` describe the current route,
 while `analysis_provider_binding` identifies the concrete selected route. These
@@ -1091,19 +1032,7 @@ analysis client. `open_binary.provider_id` accepts a concrete provider ID or
 concrete version, selection source, and complete analysis profile through
 `analysis_provider_binding`. Ambiguity and unknown, unavailable, or unsupported
 choices return typed selection details. A selected provider is never replaced
-automatically after a runtime failure. When the bound route does not declare an
-operation, its error points to `binary_session` with `detail: "complete"` for
-candidate capabilities and an explicit `open_binary` provider choice. A
-candidate's availability does not guarantee support for the selected target;
-switching may discard provider session edits, and retained Evidence does not restore them.
-
-When the selected provider reports `release_verification` in its binding,
-the status compares its reported release version at binding with the provider's
-verified baseline. It does not recheck the executable, authenticate its bytes,
-or guarantee results.
-An unverified release may still be usable; the optional remediation preserves
-the caller's choice. Omission means verification was not reported. Target-free
-discovery does not probe a version solely to populate this fact.
+automatically after a runtime failure.
 
 When an admitted `open_binary` attempt fails, `error.details.selection_at_failure`
 records the canonical binary path and SHA-256, resource root (including its
@@ -1374,22 +1303,6 @@ Those raw observations are not recorded in the Evidence bundle. If the SDK
 suppresses the error reply after client cancellation, Evidence tools cannot
 recover them. An empty bundle does not prove that no partial work or side
 effect occurred; output receipts and cleanup observations remain distinct.
-If an authenticated Evidence record exceeds the investigation's retention
-allowance, the refusal carries it inline as
-`details.partial_observation: {kind: "unretained-evidence", evidence: ...}`
-when it fits the response budget. Its ID identifies the supplied content; it
-is not a retained-session reference. If authentication itself failed or lacked
-headroom, no authenticated Evidence is claimed. When the completed record does
-not fit the MCP response, the original retention error carries
-`details.partial_observation_omitted` with the response constraint if the
-remaining error fits; the observation remains unretained. Otherwise the usual
-oversized-error recovery applies.
-When an atomic derived-Evidence and Unknown write exceeds the allowance after
-authentication, the completed Evidence is returned the same way if absent from
-the investigation. If that exact Evidence was already present, the error
-instead carries `{kind: "retained-evidence", evidence_id: ...}` for the current
-session. The refused write adds neither a record nor an Unknown revision; a
-previously retained record or Unknown remains available.
 The broader retention decision is tracked in
 [#4276](https://github.com/morluto/rea/issues/4276).
 
@@ -1509,11 +1422,11 @@ failing owner supports runtime recovery; `inspect_analysis_settings` is optional
 when those facts are supplied. Updates are atomic, apply to new work, survive
 target close/open, and vanish when REA exits. Explicit per-call arguments take
 precedence. Neither tool changes host deadlines or resolves retained cleanup.
-See [runtime settings and recovery](../design/limits-and-recovery.md#runtime-settings-through-mcp)
+See [runtime settings and recovery](design/limits-and-recovery.md#runtime-settings-through-mcp)
 for the full setting list, reset/revision semantics and ASAR retry example.
 For implementation ownership, accepted-operation snapshots, provider wiring,
 and extension guidance, see the
-[maintainer design](../design/limits-and-recovery.md#ownership-and-data-flow).
+[maintainer design](design/limits-and-recovery.md#ownership-and-data-flow).
 
 Ghidra and Hopper startup updates apply to the next startup attempt without
 restarting REA. Ghidra decompile timeout updates apply on the existing Program.
@@ -1527,7 +1440,7 @@ that Ghidra has finished importing the target. The first Ghidra-backed query,
 such as `binary_overview`, starts the engine and waits for import, default
 auto-analysis, bridge connection, and health readiness before returning analysis.
 With `REA_GHIDRA_PROJECT_PATH`, shared CLI/MCP configuration instead selects an
-[existing project copy](../getting-started/installation.md#reuse-an-existing-ghidra-project), whose
+[existing project copy](installation.md#reuse-an-existing-ghidra-project), whose
 content fingerprint is committed into the profile. Import, auto-analysis and
 repair scripts are skipped; original analysis completeness/settings stay unknown,
 and bridge database edits are unavailable. The same startup/client deadlines
@@ -1543,7 +1456,7 @@ These deadlines have different owners:
 | Darwin swiftc helper | REA allows 120,000 ms by default for ownership-helper compilation; `REA_SWIFTC_COMPILE_TIMEOUT_MS` accepts decimal integers from 1–2,147,483,647 ms. Invalid values fail configuration validation. Set it in the environment that starts REA and restart REA; the next ownership-helper compile uses the new value. |
 | Individual tool call | The client bounds its wait, including cold engine startup. The pinned client SDK 2.3.1 defaults to 60,000 ms and can cancel earlier than REA's startup deadline.                                                                                                                                                    |
 
-For [Codex and Kimi registrations](../getting-started/client-configuration.md), setup supplies
+For [Codex and Kimi registrations](client-configuration.md), setup supplies
 missing tool deadlines from the known provider allowance plus 120 seconds of
 operation headroom: 450 seconds with the default Ghidra allowance, or 2820
 seconds with `REA_GHIDRA_STARTUP_TIMEOUT_MS=2700000`. Positive caller-selected
@@ -1633,7 +1546,7 @@ clear cleanup blockers, or extend the client's deadline. Alternatively, change
 `REA_GHIDRA_STARTUP_TIMEOUT_MS` in REA's launch environment and restart the
 server, preserving Evidence and closing as above. Close/reopen on the same
 connection cannot apply a changed launch environment. See the
-[CLI retry example](../getting-started/installation.md#ghidra).
+[CLI retry example](installation.md#ghidra).
 
 This close/reopen flow was exercised on one real Linux stdio connection after a
 controlled startup timeout, followed by a successful overview and function
@@ -1671,21 +1584,12 @@ cursor outside a procedure is represented as
 procedure resolution returns typed unreadable output; provider errors never
 become absence from their message text. `inspect_address_context` requires an explicit address and
 returns name, procedure, comment, inline-comment, and bookmark facets;
-unsupported facets are local `unavailable` outcomes. A facet rejected for
-invalid input or a resource constraint includes its canonical `error`
-projection, including structured issues or reported limits and recovery,
-alongside the other facet outcomes. Use `current_document`,
+unsupported facets are local `unavailable` outcomes. A facet whose input is
+rejected includes its canonical `error` projection, including any structured
+issues, alongside the other facet outcomes. Use `current_document`,
 `current_address`, and `current_procedure` for direct single-field lookups; use
 the aggregate tools when you need related context together.
 
-If unretained facet Evidence makes the context response exceed an MCP delivery
-limit, REA omits those partial records in estimated size order until the reply
-fits. Each affected facet identifies its unretained omission and the delivery
-constraint; other facets and partials remain in the response when they fit. The
-size estimate is used only for ordering and can omit more records than a perfect
-wire-size ordering would. If the remaining context still cannot fit, call the
-needed address operations individually and follow their delivery diagnostics.
-
 ## Integrity attribution and reconstruction claims
 
 Artifact comparison results include `integrity_mismatch_evidence_ids`, naming
@@ -1792,7 +1696,7 @@ unknown, and the other fields still compare. Other kinds are not compared:
 their fields record layout, come from the bytes of the artifact or its
 container or from caller options that identify the target, or repeat
 occurrence fields, except Godot PCK source paths, which
-[Godot PCK archives](../godot-pck.md) explains.
+[Godot PCK archives](godot-pck.md) explains.
 
 <!-- END:compare-artifacts:compared-format-metadata-kinds -->
 
@@ -1996,14 +1900,12 @@ check full-profile local-path rules. Compact MCP workflow tests verify canonical
 rejection of invalid inputs before provider work, independent of how much detail
 the selected advertisement retains.
 
-<a id="hotcold-catalog-discovery"></a>
-
 ### Hot/cold catalog discovery
 
 `REA_MCP_TOOL_CATALOG_PROFILE=hot-cold` opts into per-connection loading for
 clients that refresh `tools/list` after `notifications/tools/list_changed`.
 The default, `full`, retains the complete upfront advertisement. Restart the
-server to change profiles. See [client configuration](../getting-started/client-configuration.md#hotcold-catalogs).
+server to change profiles. See [client configuration](client-configuration.md#hotcold-catalogs).
 
 Hot/cold initially advertises `binary_session`, `open_binary`, `close_binary`,
 `get_evidence_bundle`, and the adapter's `discover_tools`.
@@ -2106,7 +2008,6 @@ bundle import/export; it does not include those view and settings tools.
 | Web investigation                                 | `browser,pcap,session,javascript-runtime`                 | page, bundle and session inspection, packet captures, JS runtime observation, evidence workflow                                                              |
 | Android application analysis                      | `android,adb,apktool,session`                             | class and method inspection, device bridge, resource decoding; add `frida` for dynamic instrumentation, `jeb` for JEB projects, `flutter` for Flutter builds |
 | Native macOS or iOS binary                        | `native,artifact,session`                                 | Mach-O, signature and property-list inspection plus container extraction                                                                                     |
-| Native analysis of a known function               | `session,enhanced,application`                            | open a binary, analyze a known function, page retained pseudocode, and export Evidence; add `direct` for focused procedure search or assembly                |
 | Managed .NET assembly                             | `managed,session`                                         | managed member comparison and reconstruction against the evidence workflow                                                                                   |
 | Electron or browser-hosted JavaScript application | `browser,electron,application,javascript-runtime,session` | runtime targets, live page inspection, bundle and capture tools, feature tracing, JavaScript semantics and reconstruction obligations                        |
 | Evidence bookkeeping only                         | `session`                                                 | open and close binaries, bundles, comparisons, unknown tracking                                                                                              |
@@ -2143,7 +2044,7 @@ server-side result validation, and both still return complete
 
 For the 1 MiB FastMCP SSE limit reported by Unsloth in
 [#9093](https://github.com/morluto/rea/issues/9093), see the
-[tested catalog configuration](../getting-started/client-configuration.md#fastmcp-and-unsloth-sse-catalog-limits).
+[tested catalog configuration](client-configuration.md#fastmcp-and-unsloth-sse-catalog-limits).
 Hot/cold selection alone does not bound later catalog refreshes.
 
 `compact` keeps the complete validation structure when it fits the budget.
@@ -2242,17 +2143,17 @@ establish an observed difference against a complete peer, but an omitted request
 does not establish removal. Partial WebSocket streams do not establish frame
 alignment. WebMCP frame IDs and tool keys are local to a capture; semantic owner
 facts and known counts determine correspondence. Retained script digests can
-establish source changes. See [browser comparison semantics](../guides/web/browser-observation.md)
+establish source changes. See [browser comparison semantics](browser-observation.md)
 for value uncertainty and storage-fingerprint recapture requirements.
 
 ## Generated catalog
 
 Custom clients upgrading from 6.1 should follow the
-[6.2 migration guide](../migrations/migration-6.2.md#mcp-results-and-evidence).
+[6.2 migration guide](migration-6.2.md#mcp-results-and-evidence).
 
 Run `npm run docs:generate` in a source checkout to generate the machine-readable
 catalog at `docs/public/product-catalog.json`. Documentation deployments serve
-the same file at [/rea/product-catalog.json](../public/product-catalog.json). PR CI retains it with the packaged
+the same file at [/rea/product-catalog.json](/rea/product-catalog.json). PR CI retains it with the packaged
 skill and portable conformance projections in the `generated-docs` artifact.
 These outputs describe the exact source revision being built; they are not
 checked-in snapshots. For a running server, `binary_session` remains the
@@ -2264,5 +2165,5 @@ authoritative source of catalog identity and tool availability.
 summary. `playwright-trace` views select source-located action boundaries, console
 and network facts, resource references and diagnostics; long text has bounded
 previews and character pages. Import does not contact recorded URLs or use a
-browser. See [offline Playwright traces](../playwright-traces.md) for coverage,
+browser. See [offline Playwright traces](./playwright-traces.md) for coverage,
 resource policies and the shared CLI workflow.

docs/migration-6.2.md

@@ -38,7 +38,7 @@ if (reply.isError === true) {
 
 Lifecycle and other non-Evidence tools still use their own advertised output
 contracts. Do not assume every successful tool returns Evidence. Consult
-[`tools/list` and the result guide](../reference/mcp-contracts.md#tool-results).
+[`tools/list` and the result guide](mcp-contracts.md#tool-results).
 
 A transport `resource_constraint` error can include a retained
 `details.reported_limits.evidence_reference`. Use `inspect_analysis_view` or
@@ -79,7 +79,7 @@ rea analyze /absolute/path/to/program --provider ghidra --snapshot /absolute/pat
 In MCP, open the target without the incompatible `snapshot_path`, run the
 required queries, then save to a new path through `close_binary.snapshot_path`.
 Do not fabricate missing provider profiles or query bindings. See
-[snapshot usage](../getting-started/cli.md#save-and-reuse-analysis-snapshots).
+[snapshot usage](cli.md#save-and-reuse-analysis-snapshots).
 
 Artifact inventory nodes identify content bytes. Path-specific role and
 permissions now belong to each occurrence:

docs/native-function-matching.md

@@ -95,8 +95,7 @@ counts, both identities and coverage. Query its `parent_evidence_id`:
 counts. Large member lists are omitted by default; select `left`/`right` columns
 explicitly or page individual `functions`. Batch `match_ids`/`function_ids`, exact function `names`, state
 and side filters intersect. Mandatory identities and provenance survive column
-selection. Default function rows include member limitations; an explicit `fields`
-selection can omit them. Page coverage covers selected retained facts. Function identity binds
+selection. Page coverage covers selected retained facts. Function identity binds
 inventory Evidence and the owning inventory’s `source_index`, preserving same-address alternatives.
 One validation, lazy member index and bounded recent filter are retained per
 immutable parent; no live target state is cached.

docs/native-investigation.md

@@ -21,7 +21,7 @@ breakpoint names.
 
 ## Start with a function
 
-Choose an installed provider from [setup](../../getting-started/installation.md#hopper). For Ghidra:
+Choose an installed provider from [setup](installation.md#hopper). For Ghidra:
 
 ```bash
 rea inspect /absolute/path/to/program --provider ghidra --json
@@ -83,9 +83,6 @@ its address when selecting the containing function. `search_procedures` matches
 the same names, in leaf or qualified spelling: the function appears once with
 its primary name as `value`, and `matched_aliases` lists the qualified names of
 the secondary symbols that matched.
-For Ghidra case-insensitive literal searches of procedures or strings,
-`raw_result` contains bridge candidates before REA applies Unicode-aware
-matching. Use `normalized_result` for matches; a raw candidate need not match.
 Overloads can share a fully qualified name; ambiguity errors return every
 matching entry address so the caller can select the intended function directly.
 
@@ -100,36 +97,6 @@ body are excluded. `procedure_references` returns internal and external edges;
 The reference collector's semantics participate in the analysis profile, so
 older snapshots cannot replay the former incomplete results under this profile.
 
-For a bounded handoff, request `procedure_references` with `detail: "summary"`.
-The summary retains the complete observation and reports the selected procedure,
-direction and counts. Page it with `inspect_analysis_view`, using the summary's
-`normalized_result.parent_evidence_id` and a view such as
-`{"kind":"native-procedure-references","collection":"references","source_address":"0x1234","offset":0,"limit":64}`.
-The optional exact source and target filters apply before paging. A row's
-`source_index` identifies it in the original retained collection, including
-duplicates. Endpoint `kind: "selected-procedure"` refers to the full procedure
-in the page summary; `kind: "null"` preserves the original null without asserting
-why it was unavailable. `kind: "shared"` carries an index into `items.endpoints`,
-where each other procedure object is stored once per page. Use collection
-`unresolved_calls` for paged unresolved call sites and their original reasons.
-Page coverage describes retained rows, not complete provider discovery or runtime
-execution. A 1 MiB projection allowance, also used by other bounded analysis views, can
-shorten a requested page; `byte_limited: true` and `coverage.next_offset` identify the
-continuation. A single row or summary that cannot fit returns a resource error;
-retrieve or export the complete parent Evidence. This allowance has no runtime
-override. Omit detail to receive the complete observation inline.
-
-For a one-shot CLI handoff, save the complete Evidence and its linked sources:
-
-```bash
-rea procedure-references /absolute/path/to/program my_function --provider ghidra \
-  --direction incoming --detail summary --evidence_output /absolute/path/to/references.json
-```
-
-Use `rea inspect-analysis-view` with that bundle as an `evidence-file` source to
-page it without reopening the target. This command requires a provider supporting
-`procedure_references`; Kuna currently reports that capability unavailable.
-
 Ghidra regex searches use Java Pattern semantics. If compiling or matching a
 pattern exhausts the engine's stack, REA returns a resource constraint and
 preserves the active database and annotations. Retry in literal mode or simplify
@@ -258,7 +225,7 @@ single-procedure CLI operation.
 `detail: "summary"` retains the complete batch and returns only its counts,
 identities and sizes. `inspect_analysis_view` then reads rows or one body from
 the retained record, an Evidence file or a portable bundle without repeating
-decompilation: see [selected batch results](../../reference/mcp-contracts.md#selected-batch-decompile-results).
+decompilation: see [selected batch results](mcp-contracts.md#selected-batch-decompile-results).
 
 Each batch schedules one provider read at a time, but has no shared input-count
 or aggregate retained-output allowance. It retains every requested row and full
@@ -285,18 +252,8 @@ The manifest reports the procedure-inventory limitations of the current call in
 call's filters, selected and excluded counts, and inventory limitations; older
 runs remain represented only by their retained function records, so a later
 inventory warning is not presented as the history of every file.
-Use `retry_failed: "independent_fresh"` (CLI: `--retry-failed independent_fresh`)
-to request an independent attempt after a null pseudocode observation that the
-provider explicitly reports as a function failure. The failed observation is
-appended before the retry, so cancellation or a later failure keeps it. The
-retry can use different analysis context. Other errors and entries merely
-missing from an export are not retried. A null without a reported function
-failure carries a limitation explaining why no independent retry was attempted.
-A provider that does not report this distinction leaves the cause unknown.
 Each function's `decompile-index.json` record, whatever its status, keeps the
-complete limitations of the observations it used. The index keeps the latest
-record for each function; `decompile-journal.jsonl` keeps earlier attempts and
-their separate limitations.
+complete limitations of the observations it used.
 When available, `provider_source` records the source of that attempt's
 pseudocode observation: a file path, SHA-256 and byte range, or a
 single-function decompile. The latter describes the method, not a unique run. A file
@@ -413,7 +370,7 @@ configuration errors and do not fall back to 128. The setting is read from
 the environment that starts REA, while MCP `regex.worker_heap_request_mib`
 can override it for workers belonging to newly accepted searches. Use
 `update_analysis_settings` for either runtime control; accepted work keeps its
-budget. See the [settings design](../../design/limits-and-recovery.md).
+budget. See the [settings design](design/limits-and-recovery.md).
 A heap failure names the effective request, known source, default, floor, and
 maximum. A positive Node.js
 `--max-old-space-size` on the process that starts
@@ -800,7 +757,7 @@ complete observation.
   It reports each `@rpath`, `@loader_path` and `@executable_path` candidate with
   its outcome. Paths outside the analyzed root, including shared-cache system
   libraries, stay undetermined. See
-  [Apple application analysis](../apple/apple-application-analysis.md#dylib-load-resolution).
+  [Apple application analysis](apple-application-analysis.md#dylib-load-resolution).
   ARM64 slice labels distinguish `arm64v8`, `arm64e`, and `arm64e.x1` while
   retaining raw CPU subtype and capability bits. The `arm64` and `arm64e`
   request filters select their respective families; a shared family label
@@ -1197,25 +1154,6 @@ arguments. The receiver class comes from LLDB's Objective-C runtime reader
 without running target code; no expression is evaluated, and REA never
 attaches to a process it did not launch.
 
-Resolved breakpoint locations, entries and caller frames also retain
-`source_location` from LLDB's line tables when available. Its `file_path`,
-one-based `line` and one-based `column` are independently nullable. An invalid
-line entry is null; historical captures may omit the field. This is debug metadata
-attribution: REA does not read that source path or verify the source file bytes.
-Absent coordinates do not imply that the executable has no source code.
-
-Free Pascal programs with retained native symbols and usable DWARF can use this
-same bounded call observation on macOS. Select an exact emitted symbol from the
-binary rather than assuming a source procedure name. The owned Pascal fixture
-uses an explicit C calling convention and a public symbol; its verification
-covers call entries, raw integer registers and source coordinates, without
-establishing typed Pascal locals or interactive stepping. After building REA,
-run the real lane with an existing caller-selected compiler:
-
-```sh
-REA_VERIFY_FPC_COMMAND=/absolute/path/to/fpc npm run verify:native:pascal-calls
-```
-
 The run ends when the process exits, `max_events` entries are recorded,
 `duration_ms` elapses, or the aggregate trace resource budget is exhausted.
 Bounded termination reports partial coverage. REA checks process termination
@@ -1281,17 +1219,15 @@ Install a Ghidra 12.x (>=12.1) release and the 64-bit full JDK it declares, then
 use them. Ghidra analysis supports Linux x64/arm64 and macOS x64/arm64; each installation requires
 the matching native decompiler. Experimental Windows x64 P0 admits native
 x86, x86-64, ARMNT (Thumb-2) and ARM64 PE applications and DLLs, [DOS MZ
-executables](../../providers/ghidra-dos.md), plus explicitly selected
-[raw NMOS 6502 images](../../providers/raw-binary.md#nmos-6502) with a caller-supplied load address,
+executables](ghidra-dos.md), plus explicitly selected
+[raw NMOS 6502 images](raw-binary.md#nmos-6502) with a caller-supplied load address,
 on fixed local NTFS volumes. Other raw CPU families remain unsupported on Windows.
 The boundary uses bundled Job Object ownership, protected runtime DACLs, and
-handle-based path admission. See [Windows Ghidra P0](../../providers/windows-ghidra-p0.md) and
+handle-based path admission. See [Windows Ghidra P0](windows-ghidra-p0.md) and
 [issue #527](https://github.com/morluto/rea/issues/527).
 On Linux and macOS, `annotate_native_function` atomically edits a function name
 and entry comments in the ephemeral database, returning refreshed analysis
-without changing executable bytes. A Ghidra address inside a function selects
-the containing function; the name and comments are changed at its entry, not
-at the selected instruction. Annotation text must contain no NUL or
+without changing executable bytes. Annotation text must contain no NUL or
 unpaired Unicode surrogate; a rejection identifies the field and UTF-16 index
 and leaves every annotation unchanged. CRLF, supplementary Unicode characters,
 and combining characters are preserved. Windows P0 remains read-only. Ghidra has no
@@ -1309,11 +1245,6 @@ and slice commitments establish the same canonical entry. The result reports
 remain separate dimensions. Equal numeric addresses without applicable coordinate
 commitments do not establish same-entry correspondence. Inspect the retained
 source Evidence and coverage when correspondence remains ambiguous.
-When both inputs authenticate to the same Evidence ID and an applicable entry
-comparison is unavailable, the match reports `method: "same-evidence"`.
-This identifies one selected observation, not a correspondence between distinct
-records or proof of complete analysis. Unavailable facets and unestablished
-call coverage remain unknown.
 To aggregate already-retained comparison results, pass their exact IDs to
 `find_changed_behavior`, for example:
 
@@ -1541,7 +1472,7 @@ Use `start`/`end` to constrain the inclusive address window, and continue with
 `next_cursor` until `complete` is true. Inspect `searched` for page coverage and
 skipped uninitialized blocks. A missing match does not establish absence from
 uninitialized or excluded memory. See
-[Ghidra byte search](../../providers/ghidra-provider.md#masked-byte-search) for mask and coverage
+[Ghidra byte search](ghidra-provider.md#masked-byte-search) for mask and coverage
 semantics. This query never executes or modifies target bytes.
 
 Exact-name xref lookup reports distinct candidate addresses as an input ambiguity;

docs/raw-binary.md

@@ -1,7 +1,7 @@
 # Headerless raw-binary analysis with Ghidra
 
 Headerless images are covered here. GameCube/Wii DOL images have a header and
-use their own format selection; see [GameCube DOL analysis](../ghidra-dol.md).
+use their own format selection; see [GameCube DOL analysis](ghidra-dol.md).
 
 REA admits a headerless executable when the caller supplies the CPU family and
 the address where file offset 0 should be mapped. That interpretation is not

docs/readme/README_ar.md

@@ -10,7 +10,7 @@
 **وجدت ميزة تعجبك؟ افهم طريقة عملها حتى مستوى الشيفرة الثنائية.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 اختر الوكلاء، وراجع التغييرات المقترحة، ثم وافق عليها. يضيف الإعداد خادم MCP الخاص بـ REA وتعليمات سير العمل المطابقة، مع الاحتفاظ بنسخ احتياطية من الإعدادات الموجودة. أعد تشغيل وكيلك بعد ذلك.
 
-يدعم الإعداد Claude Code وCodex وCursor وGemini CLI وGrok Build و[وكلاء آخرين](../getting-started/installation.md#supported-agents). راجع [التثبيت والإعداد](../getting-started/installation.md) لتهيئة موفّري التحليل وتسجيل MCP يدويًا.
+يدعم الإعداد Claude Code وCodex وCursor وGemini CLI وGrok Build و[وكلاء آخرين](../installation.md#supported-agents). راجع [التثبيت والإعداد](../installation.md) لتهيئة موفّري التحليل وتسجيل MCP يدويًا.
 
 يستخدم MCP مخططات إدخال مختصرة افتراضيًا. للحصول على إرشادات الحقول الكاملة وتفاصيل التحقق المتداخل، اضبط `REA_MCP_INPUT_SCHEMA_PROFILE=full` في تسجيل MCP. يحتفظ الخياران بجميع الأدوات والتحقق القياسي نفسه على الخادم؛ راجع دليل عقود MCP.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-لتحليل الشيفرة الأصلية، هيّئ موفّرًا أولًا. راجع [دليل CLI وEvidence](../getting-started/cli.md) لأوامر تحليل الشيفرة الأصلية، واختيار الموفّر، واللقطات، والاستخدام في السكربتات.
+لتحليل الشيفرة الأصلية، هيّئ موفّرًا أولًا. راجع [دليل CLI وEvidence](../cli.md) لأوامر تحليل الشيفرة الأصلية، واختيار الموفّر، واللقطات، والاستخدام في السكربتات.
 
 ### تحديث REA
 
@@ -151,45 +151,45 @@ npx rea-agents@latest setup
 
 يتطلب REA إصدار Node.js 22.x (>=22.23.4) أو 24.x (>=24.22.1) أو 26+ (>=26.12.1)، إضافة إلى npm. تعتمد الأدوات الإضافية والأنظمة المضيفة المدعومة على الهدف:
 
-| الهدف                           | ما يعيده REA                                                                                               | المتطلبات والدليل                                                                                                                                            |
-| ------------------------------- | ---------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------ |
-| الملفات الثنائية للشيفرة الأصلية | شيفرة شبه برمجية، وتعليمات تجميع، وسلاسل نصية، ورموز، واستدعاءات، ومراجع                                    | Hopper أو Ghidra أو IDA أو Kuna؛ [تحليل الشيفرة الأصلية](../guides/native/native-investigation.md)                                                            |
-| بنية ELF دون تشغيل              | الأقسام والمقاطع والرموز ومعلومات إعادة التموضع الأصلية، وآليات الحماية المحتملة المستدلّ عليها بالفحص الثابت | pwntools يوفّره المستدعي على Linux x64؛ [تشخيص الملفات الثنائية](../guides/native/binary-diagnostics.md)                                                      |
-| PE certificates                 | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                               | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                      |
-| PE imports                      | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                 | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                |
-| شيفرة EVM البايتية              | محددات التوجيه، وإزاحات البايتات، والمعاملات المستنتجة، وقابلية تغيير الحالة                                | مدخل محلي يحمل بايتات خامًا أو تمثيلًا سداسيًا عشريًا على Linux x64؛ [دليل EVM دون تشغيل](../guides/evm/evm-bytecode.md)                                          |
-| Rust binaries                   | Embedded cargo-auditable dependency list                                                                   | [Rust binaries](../rust-binaries.md)                                                                                                                         |
-| ELF notes                       | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                            | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                 |
-| Binary hardening                | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                        | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                |
-| Linux kernel modules            | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                       |
-| Erlang BEAM                     | IFF chunks, atoms, exports, and tables                                                                     | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                            |
-| Apple IPS crashes               | .ips metadata, threads, images, registers and crash classes                                                | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                |
-| أعطال Linux المسجّلة             | سجلات note الخام، ومسجّلات المعالج/الإشارات لكل خيط مسجّل، وترشيحات اختيارية لخرائط الذاكرة                     | pwntools يوفّره المستدعي على Linux x64؛ GDB/pwndbg اختياريان؛ [الأعطال المسجّلة](../guides/native/recorded-crashes.md)                                          |
-| تثبيتات سطح المكتب              | عائلات وقت التشغيل، والملفات الداعمة، وعلامات المكونات، والخطوات التالية                                     | فحص محدود للملفات والترويسات；[تطبيقات سطح المكتب](../desktop-applications.md)                                                                               |
-| JavaScript / Electron           | الوحدات، وعمليات الاستيراد، وخرائط المصدر، والمسارات، وIPC، وعلاقات إضافات الشيفرة الأصلية                    | Node.js وnpm؛ [تحليل التطبيقات](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                                |
-| المواقع                         | بنية الصفحة، والسكربتات، وملاحظات الشبكة، ولقطات الشاشة المطلوبة                                            | متصفح من عائلة Chrome؛ [تحليل المتصفح](../guides/web/browser-observation.md)                                                                                 |
-| تسجيلات الشبكة المحفوظة          | الطلبات، والاستجابات، ومحتويات الحمولة المتاحة، ومواضعها في المصدر                                          | HAR / Fiddler Everywhere SAZ؛ وmitmdump على Linux لتسجيلات mitmproxy بصيغتها الأصلية؛ [دليل تسجيلات الشبكة](../guides/web/web-network-captures.md)              |
-| التقاط الحزم                    | نقاط النهاية وDNS وTLS SNI وتوزيع البروتوكولات وطلبات HTTP                                                  | tshark وcapinfos يوفّرهما المُستدعي؛ [دليل pcap](../guides/data/pcap-analysis.md)                                                                              |
-| تجميعات .NET                    | البيانات الوصفية، وتعليمات CIL، واعتماديات الشيفرة الأصلية المعلنة، ومقارنات البناء                         | فحص ثابت؛ [دليل الشيفرة المُدارة](../guides/managed/managed-code-analysis.md)                                                                                 |
-| PyInstaller                     | CArchive, PYZ, Python bytecode                                                                             | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                        |
-| حزم Android APK                 | تصريحات ملف manifest، والأصناف، والدوال الناتجة عن فك الترجمة، والمراجع                                     | JADX دون واجهة رسومية وJDK كامل على Linux/macOS/Windows x64؛ [دليل Android](../guides/android/android-analysis.md)                                           |
-| أجهزة Android                   | الأجهزة والحزم والعمليات والسجلات والدامبات ولقطات الشاشة ونقل APK/الملفات                                   | adb يوفّره المُستدعي (محاكي أو جهاز)؛ [دليل ADB](../guides/android/adb-device-analysis.md)                                                                     |
-| مشاريع JEB                      | وحدات المشروع من المحرك وبصمات المصنّفات والكود الزائف للأنواع/الدوال                                        | عميل JEB يبدأه المُستدعي ويقدّم MCP، ويُختار عبر REA_JEB_MCP_URL؛ [دليل JEB](../providers/jeb-analysis.md)                                                      |
-| موارد Android                   | البيان المفكوك الترميز وجداول السلاسل واللغات وحقائق الإصدار                                                 | مُشغّل Apktool يوفّره المُستدعي؛ [دليل الموارد](../guides/android/apktool-resource-analysis.md)                                                                  |
-| تطبيقات Flutter                 | بصمة لقطة Dart وهشوش المكتبات لكل ABI وأصل بناء المحرك                                                     | لا شيء (تحليل APK ساكن)؛ [دليل Flutter](../guides/android/flutter-analysis.md)                                                                                |
-| البرامج الثابتة                 | المناطق، ونتائج الاستخراج، وما يُمرّر إلى تحليل الشيفرة الأصلية                                                | Binwalk / Unblob على Linux؛ [دليل البرامج الثابتة](../guides/firmware/firmware-analysis.md)                                                                  |
-| الحزم المسجلة                   | حقول مختارة وقيم متكررة ومرشحات وقواعد فك الترميز                                                          | Linux: TShark 4.x + prlimit; [دليل التقاط الحزم](../guides/data/packet-captures.md)                                                                          |
-| الإشارات المنطقية المسجلة        | تعليقات مفكك الترميز ونطاقات العينات ومعلومات التشخيص                                                      | Linux: sigrok-cli 0.7.2 + prlimit; [دليل الإشارات](../guides/signals/signal-recordings.md)                                                                    |
-| الحزم والموارد                  | قوائم الملفات، والبصمات، وملفات plist، وبنية حزم Apple، والموارد المستخرجة                                 | [دليل تحليل الملفات وJavaScript](../guides/javascript/javascript-artifact-reconstruction.md)، [تطبيقات Apple](../guides/apple/apple-application-analysis.md) |
-| سلوك العمليات                   | مخرجات الطرفية، والتفاعلات، وملاحظات الخروج ونظام الملفات، ومقارنات التشغيل                                  | Linux/macOS مع PTY أصلي؛ [تسجيل سلوك العمليات](../guides/runtime/process-capture.md)                                                                         |
-| ملفات Go الثنائية               | إصدار المترجم المضمّن والوحدات والاستبدالات وإعدادات البناء                                                   | فحص ثابت مدمج ELF/PE/thin Mach-O; لا يتطلب تثبيت Go                                                                                                           |
-| قواعد بيانات SQLite             | الجداول والأعمدة والفهارس والعروض والمشغلات وصفوف مختارة من الجداول العادية                                  | لقطة محلية لقاعدة البيانات/WAL؛ Node.js 24.x >=24.15 أو 26+ مع حدود SQLite الأصلية                                                                            |
-| كائنات شيفرة GPU                | أهداف CUDA/HIP ومعاملات وموارد النوى المختارة ونص PTX المحفوظ                                               | فحص ثابت مدمج ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                         |
-| ملفات النماذج                   | بيانات GGUF / safetensors الوصفية وتصريحات الموترات والمجاميع المشتقة                                      | فحص الترويسات؛ بصمة الملف الكامل اختيارية; [GGUF / safetensors](../model-artifacts.md)                                                                       |
-| بيانات IL2CPP الوصفية           | صور التجميعات وأسماء الأنواع والدوال ونطاقات الفهارس في Unity global-metadata.dat                           | فك ثابت للإصدارات 24 و27 و29 و31 و39؛ لا يتطلب Unity                                                                                                           |
-| Godot PCK                       | جرد الأرشيف واستخراجه وحقائق الترويسات والأدلة الأصلية وهوية المحتوى المختار                                  | الصيغ الثابتة 2 و3 و4؛ لا يتطلب Godot                                                                                                                         |
-| ملفات WASM                      | التحقق والأقسام وأشكال WAT الدقيقة للاستيراد والتصدير وWAT المفكوك                                           | يوفّره المستخدم WABT 1.0.42; `inspect_wasm_artifact`                                                                                                          |
-| توقيعات APK                     | الموقّعون v1/v2/v3/v3.1 وبصمات الشهادات وتدوير المفاتيح واتساق الملخصات داخليًا                              | فحص ثابت مدمج; `inspect_apk_signature`                                                                                                                       |
+| الهدف                           | ما يعيده REA                                                                                               | المتطلبات والدليل                                                                                                                    |
+| ------------------------------- | ---------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------ |
+| الملفات الثنائية للشيفرة الأصلية | شيفرة شبه برمجية، وتعليمات تجميع، وسلاسل نصية، ورموز، واستدعاءات، ومراجع                                    | Hopper أو Ghidra أو IDA أو Kuna؛ [تحليل الشيفرة الأصلية](../native-investigation.md)                                                  |
+| بنية ELF دون تشغيل              | الأقسام والمقاطع والرموز ومعلومات إعادة التموضع الأصلية، وآليات الحماية المحتملة المستدلّ عليها بالفحص الثابت | pwntools يوفّره المستدعي على Linux x64؛ [تشخيص الملفات الثنائية](../binary-diagnostics.md)                                            |
+| PE certificates                 | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                               | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                              |
+| PE imports                      | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                 | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                        |
+| شيفرة EVM البايتية              | محددات التوجيه، وإزاحات البايتات، والمعاملات المستنتجة، وقابلية تغيير الحالة                                | مدخل محلي يحمل بايتات خامًا أو تمثيلًا سداسيًا عشريًا على Linux x64؛ [دليل EVM دون تشغيل](../evm-bytecode.md)                             |
+| Rust binaries                   | Embedded cargo-auditable dependency list                                                                   | [Rust binaries](../rust-binaries.md)                                                                                                 |
+| ELF notes                       | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                            | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                         |
+| Binary hardening                | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                        | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                        |
+| Linux kernel modules            | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                               |
+| Erlang BEAM                     | IFF chunks, atoms, exports, and tables                                                                     | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                    |
+| Apple IPS crashes               | .ips metadata, threads, images, registers and crash classes                                                | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                        |
+| أعطال Linux المسجّلة             | سجلات note الخام، ومسجّلات المعالج/الإشارات لكل خيط مسجّل، وترشيحات اختيارية لخرائط الذاكرة                     | pwntools يوفّره المستدعي على Linux x64؛ GDB/pwndbg اختياريان؛ [الأعطال المسجّلة](../recorded-crashes.md)                                |
+| تثبيتات سطح المكتب              | عائلات وقت التشغيل، والملفات الداعمة، وعلامات المكونات، والخطوات التالية                                     | فحص محدود للملفات والترويسات；[تطبيقات سطح المكتب](../desktop-applications.md)                                                       |
+| JavaScript / Electron           | الوحدات، وعمليات الاستيراد، وخرائط المصدر، والمسارات، وIPC، وعلاقات إضافات الشيفرة الأصلية                    | Node.js وnpm؛ [تحليل التطبيقات](../javascript-application-workflows.md); Linux: procps `ps`                                          |
+| المواقع                         | بنية الصفحة، والسكربتات، وملاحظات الشبكة، ولقطات الشاشة المطلوبة                                            | متصفح من عائلة Chrome؛ [تحليل المتصفح](../browser-observation.md)                                                                    |
+| تسجيلات الشبكة المحفوظة          | الطلبات، والاستجابات، ومحتويات الحمولة المتاحة، ومواضعها في المصدر                                          | HAR / Fiddler Everywhere SAZ؛ وmitmdump على Linux لتسجيلات mitmproxy بصيغتها الأصلية؛ [دليل تسجيلات الشبكة](../web-network-captures.md) |
+| التقاط الحزم                    | نقاط النهاية وDNS وTLS SNI وتوزيع البروتوكولات وطلبات HTTP                                                  | tshark وcapinfos يوفّرهما المُستدعي؛ [دليل pcap](../pcap-analysis.md)                                                                  |
+| تجميعات .NET                    | البيانات الوصفية، وتعليمات CIL، واعتماديات الشيفرة الأصلية المعلنة، ومقارنات البناء                         | فحص ثابت؛ [دليل الشيفرة المُدارة](../managed-code-analysis.md)                                                                        |
+| PyInstaller                     | CArchive, PYZ, Python bytecode                                                                             | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                |
+| حزم Android APK                 | تصريحات ملف manifest، والأصناف، والدوال الناتجة عن فك الترجمة، والمراجع                                     | JADX دون واجهة رسومية وJDK كامل على Linux/macOS/Windows x64؛ [دليل Android](../android-analysis.md)                                  |
+| أجهزة Android                   | الأجهزة والحزم والعمليات والسجلات والدامبات ولقطات الشاشة ونقل APK/الملفات                                   | adb يوفّره المُستدعي (محاكي أو جهاز)؛ [دليل ADB](../adb-device-analysis.md)                                                            |
+| مشاريع JEB                      | وحدات المشروع من المحرك وبصمات المصنّفات والكود الزائف للأنواع/الدوال                                        | عميل JEB يبدأه المُستدعي ويقدّم MCP، ويُختار عبر REA_JEB_MCP_URL؛ [دليل JEB](../jeb-analysis.md)                                        |
+| موارد Android                   | البيان المفكوك الترميز وجداول السلاسل واللغات وحقائق الإصدار                                                 | مُشغّل Apktool يوفّره المُستدعي؛ [دليل الموارد](../apktool-resource-analysis.md)                                                         |
+| تطبيقات Flutter                 | بصمة لقطة Dart وهشوش المكتبات لكل ABI وأصل بناء المحرك                                                     | لا شيء (تحليل APK ساكن)؛ [دليل Flutter](../flutter-analysis.md)                                                                       |
+| البرامج الثابتة                 | المناطق، ونتائج الاستخراج، وما يُمرّر إلى تحليل الشيفرة الأصلية                                                | Binwalk / Unblob على Linux؛ [دليل البرامج الثابتة](../firmware-analysis.md)                                                          |
+| الحزم المسجلة                   | حقول مختارة وقيم متكررة ومرشحات وقواعد فك الترميز                                                          | Linux: TShark 4.x + prlimit; [دليل التقاط الحزم](../packet-captures.md)                                                              |
+| الإشارات المنطقية المسجلة        | تعليقات مفكك الترميز ونطاقات العينات ومعلومات التشخيص                                                      | Linux: sigrok-cli 0.7.2 + prlimit; [دليل الإشارات](../signal-recordings.md)                                                           |
+| الحزم والموارد                  | قوائم الملفات، والبصمات، وملفات plist، وبنية حزم Apple، والموارد المستخرجة                                 | [دليل تحليل الملفات وJavaScript](../javascript-artifact-reconstruction.md)، [تطبيقات Apple](../apple-application-analysis.md)        |
+| سلوك العمليات                   | مخرجات الطرفية، والتفاعلات، وملاحظات الخروج ونظام الملفات، ومقارنات التشغيل                                  | Linux/macOS مع PTY أصلي؛ [تسجيل سلوك العمليات](../process-capture.md)                                                                |
+| ملفات Go الثنائية               | إصدار المترجم المضمّن والوحدات والاستبدالات وإعدادات البناء                                                   | فحص ثابت مدمج ELF/PE/thin Mach-O; لا يتطلب تثبيت Go                                                                                   |
+| قواعد بيانات SQLite             | الجداول والأعمدة والفهارس والعروض والمشغلات وصفوف مختارة من الجداول العادية                                  | لقطة محلية لقاعدة البيانات/WAL؛ Node.js 24.x >=24.15 أو 26+ مع حدود SQLite الأصلية                                                    |
+| كائنات شيفرة GPU                | أهداف CUDA/HIP ومعاملات وموارد النوى المختارة ونص PTX المحفوظ                                               | فحص ثابت مدمج ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                 |
+| ملفات النماذج                   | بيانات GGUF / safetensors الوصفية وتصريحات الموترات والمجاميع المشتقة                                      | فحص الترويسات؛ بصمة الملف الكامل اختيارية; [GGUF / safetensors](../model-artifacts.md)                                               |
+| بيانات IL2CPP الوصفية           | صور التجميعات وأسماء الأنواع والدوال ونطاقات الفهارس في Unity global-metadata.dat                           | فك ثابت للإصدارات 24 و27 و29 و31 و39؛ لا يتطلب Unity                                                                                   |
+| Godot PCK                       | جرد الأرشيف واستخراجه وحقائق الترويسات والأدلة الأصلية وهوية المحتوى المختار                                  | الصيغ الثابتة 2 و3 و4؛ لا يتطلب Godot                                                                                                 |
+| ملفات WASM                      | التحقق والأقسام وأشكال WAT الدقيقة للاستيراد والتصدير وWAT المفكوك                                           | يوفّره المستخدم WABT 1.0.42; `inspect_wasm_artifact`                                                                                  |
+| توقيعات APK                     | الموقّعون v1/v2/v3/v3.1 وبصمات الشهادات وتدوير المفاتيح واتساق الملخصات داخليًا                              | فحص ثابت مدمج; `inspect_apk_signature`                                                                                               |
 
 يقرأ الفحص الثابت لـ JavaScript و.NET الملفات المقدّمة دون تشغيل التطبيق. يشغّل التسجيل أثناء التنفيذ الهدف المحدد أو يتفاعل معه بصلاحيات مستخدمك؛ ويشرح كل دليل للتسجيل أثناء التنفيذ آثاره.
 
@@ -197,7 +197,7 @@ npx rea-agents@latest setup
 
 للملفات الثنائية الكبيرة، ارفع مهلة بدء الموفّر باستخدام `REA_GHIDRA_STARTUP_TIMEOUT_MS` أو `REA_HOPPER_STARTUP_TIMEOUT_MS`.
 
-تختلف صيغ ملفات الشيفرة الأصلية والأنظمة المضيفة المدعومة باختلاف الموفّر. راجع [إعداد Hopper وGhidra](../getting-started/installation.md#hopper)، و[دليل IDA](../providers/ida-provider.md)، [Kuna](../kuna-provider.md)، و[دعم Ghidra التجريبي على Windows](../providers/windows-ghidra-p0.md). يدعم Ghidra أيضًا [تحليل DOS ذي 16 بت](../providers/ghidra-dos.md). لاختيار الموفّر، راجع [دليل CLI](../getting-started/cli.md#choose-a-provider). تحقّق من [توفر الميزات في الإصدارات](../getting-started/installation.md#released-package-and-main) للميزات المضافة بعد أحدث إصدار على npm.
+تختلف صيغ ملفات الشيفرة الأصلية والأنظمة المضيفة المدعومة باختلاف الموفّر. راجع [إعداد Hopper وGhidra](../installation.md#hopper)، و[دليل IDA](../ida-provider.md)، [Kuna](../kuna-provider.md)، و[دعم Ghidra التجريبي على Windows](../windows-ghidra-p0.md). يدعم Ghidra أيضًا [تحليل DOS ذي 16 بت](../ghidra-dos.md). لاختيار الموفّر، راجع [دليل CLI](../cli.md#choose-a-provider). تحقّق من [توفر الميزات في الإصدارات](../installation.md#released-package-and-main) للميزات المضافة بعد أحدث إصدار على npm.
 
 ## دراسات الحالة
 
@@ -278,28 +278,28 @@ agent-env run ./my-env
 <details>
 <summary><strong>أي وكلاء يمكنهم استخدام REA؟</strong></summary>
 
-أي وكيل يدعم خوادم MCP المحلية. يهيّئ الإعداد [الوكلاء المدعومين](../getting-started/installation.md#supported-agents)؛ ويمكن للعملاء الآخرين استخدام [تسجيل MCP يدويًا](../getting-started/installation.md#mcp-registry).
+أي وكيل يدعم خوادم MCP المحلية. يهيّئ الإعداد [الوكلاء المدعومين](../installation.md#supported-agents)؛ ويمكن للعملاء الآخرين استخدام [تسجيل MCP يدويًا](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>هل أحتاج إلى Hopper أو Ghidra أو IDA أو Kuna؟</strong></summary>
 
-يستخدم تحليل الشيفرة الأصلية المتعمق أحدها. يعمل الفحص الثابت لـ JavaScript و.NET دون محرك لتحليل الشيفرة الأصلية. يستطيع الإعداد تثبيت Hopper بعد الموافقة؛ أما Ghidra وIDA وKuna فتستخدم تثبيتاتك الموجودة. راجع [إعداد الموفّرين](../getting-started/installation.md#hopper).
+يستخدم تحليل الشيفرة الأصلية المتعمق أحدها. يعمل الفحص الثابت لـ JavaScript و.NET دون محرك لتحليل الشيفرة الأصلية. يستطيع الإعداد تثبيت Hopper بعد الموافقة؛ أما Ghidra وIDA وKuna فتستخدم تثبيتاتك الموجودة. راجع [إعداد الموفّرين](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>هل أحتاج إلى تشغيل Hopper أولًا؟</strong></summary>
 
-يشغّل REA برنامج Hopper عندما تحتاج العملية إليه. على macOS، قد تظهر عند التشغيل الأول نافذة تطلب اختيار وضع العرض التجريبي أو تفعيل الترخيص. راجع [تشغيل Hopper واستكشاف الأخطاء](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+يشغّل REA برنامج Hopper عندما تحتاج العملية إليه. على macOS، قد تظهر عند التشغيل الأول نافذة تطلب اختيار وضع العرض التجريبي أو تفعيل الترخيص. راجع [تشغيل Hopper واستكشاف الأخطاء](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>ماذا يفعل تثبيت المهارة من skills.sh؟</strong></summary>
 
-توفّر المهارة تعليمات الاستقصاء لوكيلك. استخدم `npx rea-agents setup` لتسجيل خادم MCP الخاص بـ REA وتثبيت التعليمات المطابقة، ثم أعد تشغيل وكيلك. راجع [تثبيت المهارة وحدها](../getting-started/installation.md#skill-only-installation).
+توفّر المهارة تعليمات الاستقصاء لوكيلك. استخدم `npx rea-agents setup` لتسجيل خادم MCP الخاص بـ REA وتثبيت التعليمات المطابقة، ثم أعد تشغيل وكيلك. راجع [تثبيت المهارة وحدها](../installation.md#skill-only-installation).
 
 </details>
 
@@ -342,12 +342,12 @@ npx rea-agents@latest setup
 
 ابدأ بـ [الأدلة العملية](https://rea.tools/ar/guides/) على الموقع. للخيارات الدقيقة والمتطلبات وعقود النتائج:
 
-- [التثبيت والإعداد](../getting-started/installation.md): تسجيل الوكلاء، وتهيئة الموفّرين، والتحديثات، وإلغاء التثبيت.
-- [الجاهزية واستكشاف الأخطاء](../getting-started/installation.md#check-readiness-for-your-task): تشخيص وكيل أو محرك تحليل محدد.
-- [CLI وEvidence](../getting-started/cli.md): الأوامر، واختيار الموفّر، واللقطات، والاستيراد/التصدير، وحالات الخروج.
-- [عقود MCP](../reference/mcp-contracts.md) و[تعليمات الوكلاء](../getting-started/mcp-prompts.md): نتائج الأدوات، والجلسات، والاستقصاءات الموجّهة.
-- [كتالوج الأدوات](../reference/mcp-contracts.md#generated-catalog): قائمة الأدوات والموفّرين وأوامر CLI المولّدة أثناء البناء.
-- [خطة العمل](../development/roadmap.md): الأعمال المخطط لها ومتابعة القدرات.
+- [التثبيت والإعداد](../installation.md): تسجيل الوكلاء، وتهيئة الموفّرين، والتحديثات، وإلغاء التثبيت.
+- [الجاهزية واستكشاف الأخطاء](../installation.md#check-readiness-for-your-task): تشخيص وكيل أو محرك تحليل محدد.
+- [CLI وEvidence](../cli.md): الأوامر، واختيار الموفّر، واللقطات، والاستيراد/التصدير، وحالات الخروج.
+- [عقود MCP](../mcp-contracts.md) و[تعليمات الوكلاء](../mcp-prompts.md): نتائج الأدوات، والجلسات، والاستقصاءات الموجّهة.
+- [كتالوج الأدوات](../mcp-contracts.md#generated-catalog): قائمة الأدوات والموفّرين وأوامر CLI المولّدة أثناء البناء.
+- [خطة العمل](../roadmap.md): الأعمال المخطط لها ومتابعة القدرات.
 
 أبلغ عن الثغرات وفق [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ applicable licenses.
 
 نرحّب بمساعدتك في تطوير REA! [افتح issue](https://github.com/morluto/rea/issues) للإبلاغ عن خطأ أو اقتراح ميزة، أو [أرسل pull request](https://github.com/morluto/rea/pulls) لتحسين الشيفرة أو التوثيق.
 
-راجع [CONTRIBUTING.md](../../CONTRIBUTING.md) لإعداد بيئة التطوير والفحوص، و[دليل الاختبار](../development/testing.md) لمسارات التحقق، و[خريطة البنية](../architecture/architecture.mermaid) لهيكل المشروع.
+راجع [CONTRIBUTING.md](../../CONTRIBUTING.md) لإعداد بيئة التطوير والفحوص، و[دليل الاختبار](../testing.md) لمسارات التحقق، و[خريطة البنية](../architecture.mermaid) لهيكل المشروع.
 
 ## الترخيص
 

docs/readme/README_de.md

@@ -10,7 +10,7 @@
 **Eine Funktion gefällt dir? Verstehe, wie sie funktioniert – bis hinunter auf die Binärebene.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Wähle deine Agenten aus, prüfe die geplanten Änderungen und bestätige sie. Die Einrichtung fügt den MCP-Server von REA und passende Workflow-Anweisungen hinzu und sichert vorhandene Konfigurationen. Starte deinen Agenten anschließend neu.
 
-Die Einrichtung unterstützt Claude Code, Codex, Cursor, Gemini CLI, Grok Build und [weitere Agenten](../getting-started/installation.md#supported-agents). Informationen zur Provider-Konfiguration und manuellen MCP-Registrierung findest du unter [Installation und Einrichtung](../getting-started/installation.md).
+Die Einrichtung unterstützt Claude Code, Codex, Cursor, Gemini CLI, Grok Build und [weitere Agenten](../installation.md#supported-agents). Informationen zur Provider-Konfiguration und manuellen MCP-Registrierung findest du unter [Installation und Einrichtung](../installation.md).
 
 MCP verwendet standardmäßig kompakte Eingabeschemas. Für vollständige Feldhinweise und Details zur verschachtelten Validierung setze `REA_MCP_INPUT_SCHEMA_PROFILE=full` in der MCP-Registrierung. Beide Profile behalten alle Tools und dieselbe kanonische Servervalidierung; siehe MCP-Vertragsleitfaden.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Konfiguriere für native Analysen zuerst einen Provider. Native Befehle, Provider-Auswahl, Snapshots und Skriptnutzung beschreibt der [CLI- und Evidence-Leitfaden](../getting-started/cli.md).
+Konfiguriere für native Analysen zuerst einen Provider. Native Befehle, Provider-Auswahl, Snapshots und Skriptnutzung beschreibt der [CLI- und Evidence-Leitfaden](../cli.md).
 
 ### REA aktualisieren
 
@@ -151,45 +151,45 @@ Dein Agent ruft REA über MCP auf, um das Ziel zu untersuchen und relevanten Cod
 
 REA benötigt Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) oder 26+ (>=26.12.1) sowie npm. Zusätzliche Werkzeuge und unterstützte Hostsysteme hängen vom Ziel ab:
 
-| Ziel                                | Was REA zurückgibt                                                                                              | Voraussetzungen und Anleitung                                                                                                                                                   |
-| ----------------------------------- | --------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Native Binärdateien                 | Pseudocode, Assemblercode, Zeichenketten, Symbole, Aufrufe und Verweise                                         | Hopper, Ghidra, IDA oder Kuna; [native Analyse](../guides/native/native-investigation.md)                                                                                       |
-| Offline-ELF-Struktur                | Sektionen, Segmente, ursprüngliche Symbole/Relokationen und mögliche Schutzmaßnahmen aus statischer Analyse     | Vom Aufrufer bereitgestelltes pwntools unter Linux x64; [Binärdiagnostik](../guides/native/binary-diagnostics.md)                                                               |
-| PE certificates                     | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                    | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                                         |
-| PE imports                          | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                      | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                                   |
-| EVM-Bytecode                        | Dispatch-Selektoren, Byte-Offsets, abgeleitete Argumente und Veränderbarkeit des Zustands                       | Lokale Eingabe mit Rohbytes oder Hexdarstellung unter Linux x64; [Offline-EVM-Leitfaden](../guides/evm/evm-bytecode.md)                                                         |
-| Rust binaries                       | Embedded cargo-auditable dependency list                                                                        | [Rust binaries](../rust-binaries.md)                                                                                                                                            |
-| ELF notes                           | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                 | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                                    |
-| Binary hardening                    | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                             | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                                   |
-| Linux kernel modules                | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                     | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                                          |
-| Erlang BEAM                         | IFF chunks, atoms, exports, and tables                                                                          | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                               |
-| Apple IPS crashes                   | .ips metadata, threads, images, registers and crash classes                                                     | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                                   |
-| Aufgezeichnete Linux-Abstürze       | Unverarbeitete Note-Einträge, Register/Signale aller aufgezeichneten Threads und optionale Zuordnungskandidaten | Vom Aufrufer bereitgestelltes pwntools unter Linux x64; optional GDB/pwndbg; [aufgezeichnete Abstürze](../guides/native/recorded-crashes.md)                                    |
-| Desktop-Installationen              | Laufzeitkandidaten, Quelldateien, Komponenten und nächste Schritte                                              | Begrenzte Verzeichnis- und Headerprüfung；[Desktop-Anwendungen](../desktop-applications.md)                                                                                     |
-| JavaScript / Electron               | Module, Imports, Source Maps, Routen, IPC und Beziehungen zu nativen Add-ons                                    | Node.js und npm; [Anwendungsanalyse](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                                              |
-| Websites                            | Seitenstruktur, Skripte, Netzwerkbeobachtungen und angeforderte Screenshots                                     | Ein Browser aus der Chrome-Familie; [Browseranalyse](../guides/web/browser-observation.md)                                                                                      |
-| Gespeicherte Netzwerkaufzeichnungen | Anfragen, Antworten, zugängliche Nutzdaten und Quellpositionen                                                  | HAR / Fiddler Everywhere SAZ; mitmdump unter Linux für Aufzeichnungen im nativen mitmproxy-Format; [Leitfaden zu Netzwerkaufzeichnungen](../guides/web/web-network-captures.md) |
-| Paketerfassungen                    | Endpunkte, DNS, TLS SNI, Protokollverteilung und HTTP-Anfragen                                                  | Vom Aufrufer bereitgestellte tshark- und capinfos-Binaries; [pcap-Leitfaden](../guides/data/pcap-analysis.md)                                                                   |
-| .NET-Assemblies                     | Metadaten, CIL-Anweisungen, deklarierte native Abhängigkeiten und Build-Vergleiche                              | Statische Untersuchung; [Leitfaden für verwalteten Code](../guides/managed/managed-code-analysis.md)                                                                            |
-| PyInstaller                         | CArchive, PYZ, Python bytecode                                                                                  | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                                           |
-| Android-APKs                        | Manifest-Deklarationen, Klassen, dekompilierte Methoden und Verweise                                            | JADX ohne grafische Oberfläche und ein vollständiges JDK unter Linux/macOS/Windows x64; [Android-Leitfaden](../guides/android/android-analysis.md)                              |
-| Android-Geräte                      | Geräte, Pakete, Prozesse, Logs, Dumps, Bildschirmaufnahmen sowie APK- und Dateiübertragungen                    | Vom Aufrufer bereitgestelltes adb (Emulator oder Gerät); [ADB-Leitfaden](../guides/android/adb-device-analysis.md)                                                              |
-| JEB-Projekte                        | Engine-gestützte Projekteinheiten, Artefakt-Prüfsummen und Pseudokode von Typen/Methoden                        | Ein vom Aufrufer gestarteter JEB-Client mit MCP, ausgewählt über REA_JEB_MCP_URL; [JEB-Leitfaden](../providers/jeb-analysis.md)                                                 |
-| Android-Ressourcen                  | Dekodiertes Manifest, String-Tabellen, Sprachen und Versionsfakten                                              | Vom Aufrufer bereitgestellter Apktool-Starter; [Ressourcen-Leitfaden](../guides/android/apktool-resource-analysis.md)                                                           |
-| Flutter-Apps                        | Dart-Snapshot-Hash, Per-ABI-Bibliotheksprüfsummen und Engine-Build-Provenienz                                   | Keine (statische APK-Analyse); [Flutter-Leitfaden](../guides/android/flutter-analysis.md)                                                                                       |
-| Firmware                            | Bereiche, Extraktionsergebnisse und Übergaben an die native Analyse                                             | Binwalk / Unblob unter Linux; [Firmware-Leitfaden](../guides/firmware/firmware-analysis.md)                                                                                     |
-| Aufgezeichnete Pakete               | Ausgewählte Felder, wiederholte Werte, Filter und Decode-as-Regeln                                              | Linux: TShark 4.x + prlimit; [Mitschnitt-Anleitung](../guides/data/packet-captures.md)                                                                                          |
-| Aufgezeichnete Logiksignale         | Decoder-Anmerkungen, Sample-Bereiche und Diagnosen                                                              | Linux: sigrok-cli 0.7.2 + prlimit; [Signalaufzeichnungen](../guides/signals/signal-recordings.md)                                                                               |
-| Pakete und Ressourcen               | Dateiinventare, Hashwerte, plists, Aufbau von Apple-Bundles und extrahierte Ressourcen                          | [Artefakt- und JavaScript-Leitfaden](../guides/javascript/javascript-artifact-reconstruction.md), [Apple-Anwendungen](../guides/apple/apple-application-analysis.md)            |
-| Prozessverhalten                    | Terminalausgabe, Interaktionen, Beobachtungen zu Prozessende und Dateisystem sowie Laufvergleiche               | Linux/macOS mit nativer PTY; [Prozessaufzeichnung](../guides/runtime/process-capture.md)                                                                                        |
-| Go-Binärdateien                     | Eingebettete Compilerversion, Module, Ersetzungen und Build-Einstellungen                                       | Integrierte statische Prüfung ELF/PE/thin Mach-O; Keine Go-Installation nötig                                                                                                   |
-| SQLite-Datenbanken                  | Tabellen, Spalten, Indizes, Views, Trigger und ausgewählte Zeilen gewöhnlicher Tabellen                         | Lokaler Datenbank/WAL-Snapshot; Node.js 24.x >=24.15 oder 26+ mit nativen SQLite-Grenzen                                                                                        |
-| GPU-Codeobjekte                     | CUDA/HIP-Ziele, ausgewählte Kernelparameter und Ressourcen, gespeicherter PTX-Text                              | Integrierte statische Prüfung ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                            |
-| Modelldateien                       | GGUF-/safetensors-Metadaten, Tensordeklarationen und abgeleitete Summen                                         | Headerprüfung; optionaler Hash der gesamten Datei; [GGUF / safetensors](../model-artifacts.md)                                                                                  |
-| IL2CPP-Metadaten                    | Unity global-metadata.dat: Assembly-Images, Typ-/Methodennamen und Indexbereiche                                | Statische Dekodierung der Versionen 24, 27, 29, 31, 39; kein Unity nötig                                                                                                        |
-| Godot PCK                           | Archivinventar und Extraktion, originale Header-/Verzeichnisdaten und ausgewählte Inhaltsidentitäten            | Statische Formate 2, 3, 4; kein Godot nötig                                                                                                                                     |
-| WASM-Artefakte                      | Validierung, Sektionen, exakte Import-/Export-WAT-Formen und dekodiertes WAT                                    | Vom Aufrufer bereitgestellt WABT 1.0.42; `inspect_wasm_artifact`                                                                                                                |
-| APK-Signaturen                      | v1/v2/v3/v3.1-Signer, Zertifikatfingerabdrücke, Schlüsselrotation und Digest-Selbstkonsistenz                   | Integrierte statische Prüfung; `inspect_apk_signature`                                                                                                                          |
+| Ziel                                | Was REA zurückgibt                                                                                              | Voraussetzungen und Anleitung                                                                                                                                        |
+| ----------------------------------- | --------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
+| Native Binärdateien                 | Pseudocode, Assemblercode, Zeichenketten, Symbole, Aufrufe und Verweise                                         | Hopper, Ghidra, IDA oder Kuna; [native Analyse](../native-investigation.md)                                                                                          |
+| Offline-ELF-Struktur                | Sektionen, Segmente, ursprüngliche Symbole/Relokationen und mögliche Schutzmaßnahmen aus statischer Analyse     | Vom Aufrufer bereitgestelltes pwntools unter Linux x64; [Binärdiagnostik](../binary-diagnostics.md)                                                                  |
+| PE certificates                     | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                    | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                              |
+| PE imports                          | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                      | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                        |
+| EVM-Bytecode                        | Dispatch-Selektoren, Byte-Offsets, abgeleitete Argumente und Veränderbarkeit des Zustands                       | Lokale Eingabe mit Rohbytes oder Hexdarstellung unter Linux x64; [Offline-EVM-Leitfaden](../evm-bytecode.md)                                                         |
+| Rust binaries                       | Embedded cargo-auditable dependency list                                                                        | [Rust binaries](../rust-binaries.md)                                                                                                                                 |
+| ELF notes                           | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                 | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                         |
+| Binary hardening                    | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                             | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                        |
+| Linux kernel modules                | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                     | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                               |
+| Erlang BEAM                         | IFF chunks, atoms, exports, and tables                                                                          | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                    |
+| Apple IPS crashes                   | .ips metadata, threads, images, registers and crash classes                                                     | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                        |
+| Aufgezeichnete Linux-Abstürze       | Unverarbeitete Note-Einträge, Register/Signale aller aufgezeichneten Threads und optionale Zuordnungskandidaten | Vom Aufrufer bereitgestelltes pwntools unter Linux x64; optional GDB/pwndbg; [aufgezeichnete Abstürze](../recorded-crashes.md)                                       |
+| Desktop-Installationen              | Laufzeitkandidaten, Quelldateien, Komponenten und nächste Schritte                                              | Begrenzte Verzeichnis- und Headerprüfung；[Desktop-Anwendungen](../desktop-applications.md)                                                                          |
+| JavaScript / Electron               | Module, Imports, Source Maps, Routen, IPC und Beziehungen zu nativen Add-ons                                    | Node.js und npm; [Anwendungsanalyse](../javascript-application-workflows.md); Linux: procps `ps`                                                                     |
+| Websites                            | Seitenstruktur, Skripte, Netzwerkbeobachtungen und angeforderte Screenshots                                     | Ein Browser aus der Chrome-Familie; [Browseranalyse](../browser-observation.md)                                                                                      |
+| Gespeicherte Netzwerkaufzeichnungen | Anfragen, Antworten, zugängliche Nutzdaten und Quellpositionen                                                  | HAR / Fiddler Everywhere SAZ; mitmdump unter Linux für Aufzeichnungen im nativen mitmproxy-Format; [Leitfaden zu Netzwerkaufzeichnungen](../web-network-captures.md) |
+| Paketerfassungen                    | Endpunkte, DNS, TLS SNI, Protokollverteilung und HTTP-Anfragen                                                  | Vom Aufrufer bereitgestellte tshark- und capinfos-Binaries; [pcap-Leitfaden](../pcap-analysis.md)                                                                    |
+| .NET-Assemblies                     | Metadaten, CIL-Anweisungen, deklarierte native Abhängigkeiten und Build-Vergleiche                              | Statische Untersuchung; [Leitfaden für verwalteten Code](../managed-code-analysis.md)                                                                                |
+| PyInstaller                         | CArchive, PYZ, Python bytecode                                                                                  | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                                |
+| Android-APKs                        | Manifest-Deklarationen, Klassen, dekompilierte Methoden und Verweise                                            | JADX ohne grafische Oberfläche und ein vollständiges JDK unter Linux/macOS/Windows x64; [Android-Leitfaden](../android-analysis.md)                                  |
+| Android-Geräte                      | Geräte, Pakete, Prozesse, Logs, Dumps, Bildschirmaufnahmen sowie APK- und Dateiübertragungen                    | Vom Aufrufer bereitgestelltes adb (Emulator oder Gerät); [ADB-Leitfaden](../adb-device-analysis.md)                                                                  |
+| JEB-Projekte                        | Engine-gestützte Projekteinheiten, Artefakt-Prüfsummen und Pseudokode von Typen/Methoden                        | Ein vom Aufrufer gestarteter JEB-Client mit MCP, ausgewählt über REA_JEB_MCP_URL; [JEB-Leitfaden](../jeb-analysis.md)                                                |
+| Android-Ressourcen                  | Dekodiertes Manifest, String-Tabellen, Sprachen und Versionsfakten                                              | Vom Aufrufer bereitgestellter Apktool-Starter; [Ressourcen-Leitfaden](../apktool-resource-analysis.md)                                                               |
+| Flutter-Apps                        | Dart-Snapshot-Hash, Per-ABI-Bibliotheksprüfsummen und Engine-Build-Provenienz                                   | Keine (statische APK-Analyse); [Flutter-Leitfaden](../flutter-analysis.md)                                                                                           |
+| Firmware                            | Bereiche, Extraktionsergebnisse und Übergaben an die native Analyse                                             | Binwalk / Unblob unter Linux; [Firmware-Leitfaden](../firmware-analysis.md)                                                                                          |
+| Aufgezeichnete Pakete               | Ausgewählte Felder, wiederholte Werte, Filter und Decode-as-Regeln                                              | Linux: TShark 4.x + prlimit; [Mitschnitt-Anleitung](../packet-captures.md)                                                                                           |
+| Aufgezeichnete Logiksignale         | Decoder-Anmerkungen, Sample-Bereiche und Diagnosen                                                              | Linux: sigrok-cli 0.7.2 + prlimit; [Signalaufzeichnungen](../signal-recordings.md)                                                                                   |
+| Pakete und Ressourcen               | Dateiinventare, Hashwerte, plists, Aufbau von Apple-Bundles und extrahierte Ressourcen                          | [Artefakt- und JavaScript-Leitfaden](../javascript-artifact-reconstruction.md), [Apple-Anwendungen](../apple-application-analysis.md)                                |
+| Prozessverhalten                    | Terminalausgabe, Interaktionen, Beobachtungen zu Prozessende und Dateisystem sowie Laufvergleiche               | Linux/macOS mit nativer PTY; [Prozessaufzeichnung](../process-capture.md)                                                                                            |
+| Go-Binärdateien                     | Eingebettete Compilerversion, Module, Ersetzungen und Build-Einstellungen                                       | Integrierte statische Prüfung ELF/PE/thin Mach-O; Keine Go-Installation nötig                                                                                        |
+| SQLite-Datenbanken                  | Tabellen, Spalten, Indizes, Views, Trigger und ausgewählte Zeilen gewöhnlicher Tabellen                         | Lokaler Datenbank/WAL-Snapshot; Node.js 24.x >=24.15 oder 26+ mit nativen SQLite-Grenzen                                                                             |
+| GPU-Codeobjekte                     | CUDA/HIP-Ziele, ausgewählte Kernelparameter und Ressourcen, gespeicherter PTX-Text                              | Integrierte statische Prüfung ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                 |
+| Modelldateien                       | GGUF-/safetensors-Metadaten, Tensordeklarationen und abgeleitete Summen                                         | Headerprüfung; optionaler Hash der gesamten Datei; [GGUF / safetensors](../model-artifacts.md)                                                                       |
+| IL2CPP-Metadaten                    | Unity global-metadata.dat: Assembly-Images, Typ-/Methodennamen und Indexbereiche                                | Statische Dekodierung der Versionen 24, 27, 29, 31, 39; kein Unity nötig                                                                                             |
+| Godot PCK                           | Archivinventar und Extraktion, originale Header-/Verzeichnisdaten und ausgewählte Inhaltsidentitäten            | Statische Formate 2, 3, 4; kein Godot nötig                                                                                                                          |
+| WASM-Artefakte                      | Validierung, Sektionen, exakte Import-/Export-WAT-Formen und dekodiertes WAT                                    | Vom Aufrufer bereitgestellt WABT 1.0.42; `inspect_wasm_artifact`                                                                                                     |
+| APK-Signaturen                      | v1/v2/v3/v3.1-Signer, Zertifikatfingerabdrücke, Schlüsselrotation und Digest-Selbstkonsistenz                   | Integrierte statische Prüfung; `inspect_apk_signature`                                                                                                               |
 
 Statische JavaScript- und .NET-Untersuchungen lesen die bereitgestellten Dateien, ohne die Anwendung auszuführen. Laufzeitaufzeichnungen führen das gewählte Ziel mit deinen Benutzerrechten aus oder interagieren damit; die jeweiligen Anleitungen beschreiben die Auswirkungen.
 
@@ -199,7 +199,7 @@ Für die Offline-Untersuchung nativer Binärdateien unterstützt REA auch GNU ob
 
 Bei großen Binärdateien kannst du die Startfrist mit `REA_GHIDRA_STARTUP_TIMEOUT_MS` oder `REA_HOPPER_STARTUP_TIMEOUT_MS` erhöhen.
 
-Native Formate und unterstützte Hostsysteme unterscheiden sich je nach Provider. Siehe [Hopper- und Ghidra-Einrichtung](../getting-started/installation.md#hopper), den [IDA-Leitfaden](../providers/ida-provider.md), [Kuna](../kuna-provider.md) und die [experimentelle Ghidra-Unterstützung unter Windows](../providers/windows-ghidra-p0.md). Ghidra unterstützt auch [16-Bit-DOS-Analyse](../providers/ghidra-dos.md). Die Provider-Auswahl beschreibt der [CLI-Leitfaden](../getting-started/cli.md#choose-a-provider). Prüfe die [Verfügbarkeit in Releases](../getting-started/installation.md#released-package-and-main) für Funktionen, die seit der neuesten npm-Version hinzugekommen sind.
+Native Formate und unterstützte Hostsysteme unterscheiden sich je nach Provider. Siehe [Hopper- und Ghidra-Einrichtung](../installation.md#hopper), den [IDA-Leitfaden](../ida-provider.md), [Kuna](../kuna-provider.md) und die [experimentelle Ghidra-Unterstützung unter Windows](../windows-ghidra-p0.md). Ghidra unterstützt auch [16-Bit-DOS-Analyse](../ghidra-dos.md). Die Provider-Auswahl beschreibt der [CLI-Leitfaden](../cli.md#choose-a-provider). Prüfe die [Verfügbarkeit in Releases](../installation.md#released-package-and-main) für Funktionen, die seit der neuesten npm-Version hinzugekommen sind.
 
 ## Fallstudien
 
@@ -278,28 +278,28 @@ REA exportiert eine lauffähige Umgebung mit einem einfachen Test, der prüft, o
 <details>
 <summary><strong>Welche Agenten können REA verwenden?</strong></summary>
 
-Jeder Agent, der lokale MCP-Server unterstützt. Die Einrichtung konfiguriert die [unterstützten Agenten](../getting-started/installation.md#supported-agents); andere Clients können die [manuelle MCP-Registrierung](../getting-started/installation.md#mcp-registry) nutzen.
+Jeder Agent, der lokale MCP-Server unterstützt. Die Einrichtung konfiguriert die [unterstützten Agenten](../installation.md#supported-agents); andere Clients können die [manuelle MCP-Registrierung](../installation.md#mcp-registry) nutzen.
 
 </details>
 
 <details>
 <summary><strong>Brauche ich Hopper, Ghidra, IDA oder Kuna?</strong></summary>
 
-Für tiefgehende native Analysen wird eines dieser Programme verwendet. Statische JavaScript- und .NET-Untersuchungen funktionieren ohne native Analyse-Engine. Die Einrichtung kann Hopper nach Zustimmung installieren; Ghidra, IDA und Kuna nutzen deine vorhandenen Installationen. Siehe [Provider-Einrichtung](../getting-started/installation.md#hopper).
+Für tiefgehende native Analysen wird eines dieser Programme verwendet. Statische JavaScript- und .NET-Untersuchungen funktionieren ohne native Analyse-Engine. Die Einrichtung kann Hopper nach Zustimmung installieren; Ghidra, IDA und Kuna nutzen deine vorhandenen Installationen. Siehe [Provider-Einrichtung](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Muss ich Hopper vorher starten?</strong></summary>
 
-REA startet Hopper, wenn eine Operation es benötigt. Unter macOS kann beim ersten Start ein Dialog erscheinen, in dem du den Demomodus auswählst oder deine Lizenz aktivierst. Siehe [Hopper-Start und Fehlerbehebung](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+REA startet Hopper, wenn eine Operation es benötigt. Unter macOS kann beim ersten Start ein Dialog erscheinen, in dem du den Demomodus auswählst oder deine Lizenz aktivierst. Siehe [Hopper-Start und Fehlerbehebung](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>Was bewirkt die Installation des Skills über skills.sh?</strong></summary>
 
-Der Skill stellt Untersuchungsanweisungen für deinen Agenten bereit. Verwende `npx rea-agents setup`, um den MCP-Server von REA zu registrieren und passende Anweisungen zu installieren. Starte deinen Agenten anschließend neu. Siehe [Installation nur des Skills](../getting-started/installation.md#skill-only-installation).
+Der Skill stellt Untersuchungsanweisungen für deinen Agenten bereit. Verwende `npx rea-agents setup`, um den MCP-Server von REA zu registrieren und passende Anweisungen zu installieren. Starte deinen Agenten anschließend neu. Siehe [Installation nur des Skills](../installation.md#skill-only-installation).
 
 </details>
 
@@ -342,12 +342,12 @@ Wenn du einen Agenten verwendest, schließe die [Aktualisierung der Einrichtung]
 
 Beginne mit den [praxisnahen Anleitungen](https://rea.tools/de/guides/) auf der Website. Genaue Optionen, Voraussetzungen und Ergebniskontrakte findest du hier:
 
-- [Installation und Einrichtung](../getting-started/installation.md): Agentenregistrierung, Provider-Konfiguration, Updates und Deinstallation.
-- [Bereitschaft und Fehlerbehebung](../getting-started/installation.md#check-readiness-for-your-task): Diagnose eines bestimmten Agenten oder einer Analyse-Engine.
-- [CLI und Evidence](../getting-started/cli.md): Befehle, Provider-Auswahl, Snapshots, Import/Export und Exit-Status.
-- [MCP-Kontrakte](../reference/mcp-contracts.md) und [Agenten-Prompts](../getting-started/mcp-prompts.md): Werkzeugergebnisse, Sitzungen und geführte Untersuchungen.
-- [Werkzeugkatalog](../reference/mcp-contracts.md#generated-catalog): Beim Build erzeugtes Inventar von Werkzeugen, Providern und CLI-Befehlen.
-- [Roadmap](../development/roadmap.md): Geplante Arbeiten und Fortschrittsübersichten zu Fähigkeiten.
+- [Installation und Einrichtung](../installation.md): Agentenregistrierung, Provider-Konfiguration, Updates und Deinstallation.
+- [Bereitschaft und Fehlerbehebung](../installation.md#check-readiness-for-your-task): Diagnose eines bestimmten Agenten oder einer Analyse-Engine.
+- [CLI und Evidence](../cli.md): Befehle, Provider-Auswahl, Snapshots, Import/Export und Exit-Status.
+- [MCP-Kontrakte](../mcp-contracts.md) und [Agenten-Prompts](../mcp-prompts.md): Werkzeugergebnisse, Sitzungen und geführte Untersuchungen.
+- [Werkzeugkatalog](../mcp-contracts.md#generated-catalog): Beim Build erzeugtes Inventar von Werkzeugen, Providern und CLI-Befehlen.
+- [Roadmap](../roadmap.md): Geplante Arbeiten und Fortschrittsübersichten zu Fähigkeiten.
 
 Melde Sicherheitslücken gemäß [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ applicable licenses.
 
 Wir freuen uns über deine Hilfe bei REA! [Öffne ein Issue](https://github.com/morluto/rea/issues), um einen Fehler zu melden oder eine Funktion vorzuschlagen, oder [sende einen Pull Request](https://github.com/morluto/rea/pulls), um Code oder Dokumentation zu verbessern.
 
-Die Entwicklungsumgebung und Prüfungen beschreibt [CONTRIBUTING.md](../../CONTRIBUTING.md), die Verifikationspfade der [Testleitfaden](../development/testing.md) und die Projektstruktur die [Architekturübersicht](../architecture/architecture.mermaid).
+Die Entwicklungsumgebung und Prüfungen beschreibt [CONTRIBUTING.md](../../CONTRIBUTING.md), die Verifikationspfade der [Testleitfaden](../testing.md) und die Projektstruktur die [Architekturübersicht](../architecture.mermaid).
 
 ## Lizenz
 

docs/readme/README_el.md

@@ -9,7 +9,7 @@
 **Βρήκες μια λειτουργία που σου αρέσει; Μάθε πώς λειτουργεί, μέχρι το επίπεδο του δυαδικού κώδικα.**
 
 [![Έκδοση npm](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![Κατάλογος εργαλείων MCP](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![Κατάλογος εργαλείων MCP](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Απαιτήσεις Node.js](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#τι-μπορείς-να-αναλύσεις)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![Άδεια MIT](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -82,7 +82,7 @@ npx rea-agents setup
 
 Επίλεξε τους agents σου, έλεγξε τις προτεινόμενες αλλαγές και ενέκρινέ τες. Η διαδικασία προσθέτει τον MCP server του REA και τις αντίστοιχες οδηγίες εργασίας, κρατώντας αντίγραφα ασφαλείας των υφιστάμενων ρυθμίσεων. Στη συνέχεια, επανεκκίνησε τον agent σου.
 
-Υποστηρίζονται τα Claude Code, Codex, Cursor, Gemini CLI, Grok Build και [άλλοι agents](../getting-started/installation.md#supported-agents). Για τη ρύθμιση των παρόχων ανάλυσης και τη μη αυτόματη καταχώριση MCP, δες τον οδηγό [εγκατάστασης και ρύθμισης](../getting-started/installation.md).
+Υποστηρίζονται τα Claude Code, Codex, Cursor, Gemini CLI, Grok Build και [άλλοι agents](../installation.md#supported-agents). Για τη ρύθμιση των παρόχων ανάλυσης και τη μη αυτόματη καταχώριση MCP, δες τον οδηγό [εγκατάστασης και ρύθμισης](../installation.md).
 
 Το MCP χρησιμοποιεί συμπαγή σχήματα εισόδου από προεπιλογή. Για πλήρεις οδηγίες πεδίων και ένθετης επικύρωσης, όρισε `REA_MCP_INPUT_SCHEMA_PROFILE=full` στην καταχώριση MCP. Και τα δύο προφίλ διατηρούν όλα τα εργαλεία και την ίδια κανονική επικύρωση διακομιστή· δες τον οδηγό συμβολαίων MCP.
 
@@ -111,7 +111,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Για ανάλυση κώδικα μηχανής, ρύθμισε πρώτα έναν πάροχο ανάλυσης. Ο [οδηγός CLI και Evidence](../getting-started/cli.md) περιγράφει τις σχετικές εντολές, την επιλογή παρόχου, τα στιγμιότυπα και τη χρήση σε scripts.
+Για ανάλυση κώδικα μηχανής, ρύθμισε πρώτα έναν πάροχο ανάλυσης. Ο [οδηγός CLI και Evidence](../cli.md) περιγράφει τις σχετικές εντολές, την επιλογή παρόχου, τα στιγμιότυπα και τη χρήση σε scripts.
 
 ### Ενημέρωση του REA
 
@@ -151,45 +151,45 @@ npx rea-agents@latest setup
 
 Το REA απαιτεί Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) ή 26+ (>=26.12.1), καθώς και npm. Τα πρόσθετα εργαλεία και τα υποστηριζόμενα συστήματα εξαρτώνται από τον στόχο:
 
-| Στόχος                                 | Τι επιστρέφει το REA                                                                                                        | Απαιτήσεις και οδηγός                                                                                                                                         |
-| -------------------------------------- | --------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Δυαδικά αρχεία με κώδικα μηχανής       | Ψευδοκώδικα, κώδικα assembly, συμβολοσειρές, σύμβολα, κλήσεις και αναφορές                                                  | Hopper, Ghidra, IDA ή Kuna· [ανάλυση κώδικα μηχανής](../guides/native/native-investigation.md)                                                                |
-| Δομή ELF χωρίς εκτέλεση                | Ενότητες, τμήματα, αρχικά σύμβολα/εγγραφές μετεγκατάστασης και ενδείξεις πιθανών μέτρων προστασίας από στατική ανάλυση      | pwntools που παρέχει ο χρήστης σε Linux x64· [διαγνωστικά δυαδικών αρχείων](../guides/native/binary-diagnostics.md)                                           |
-| Δυαδικά αρχεία Go                      | Ενσωματωμένη έκδοση μεταγλωττιστή, modules, αντικαταστάσεις και ρυθμίσεις μεταγλώττισης                                     | Ενσωματωμένη στατική εξέταση ELF/PE/thin Mach-O· δεν απαιτείται εγκατάσταση του Go                                                                            |
-| Δυαδικά αρχεία Rust                    | Ενσωματωμένα ονόματα, εκδόσεις, πηγές και σχέσεις εξάρτησης των crates από το cargo-auditable                               | Ενσωματωμένη στατική εξέταση ELF/PE/thin Mach-O· [δυαδικά αρχεία Rust](../rust-binaries.md)                                                                   |
-| PE certificates                        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                       |
-| PE imports                             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                 |
-| ELF notes                              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                  |
-| Binary hardening                       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                 |
-| Apple IPS crashes                      | .ips metadata, threads, images, registers and crash classes                                                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                 |
-| Linux kernel modules                   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                        |
-| Erlang BEAM                            | IFF chunks, atoms, exports, and tables                                                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                             |
-| Αρχείο WASM                            | Έλεγχο εγκυρότητας, ενότητες, ακριβείς μορφές εισαγωγών/εξαγωγών σε WAT και αποκωδικοποιημένο WAT                           | WABT 1.0.42 που παρέχει ο χρήστης· `inspect_wasm_artifact`                                                                                                    |
-| Bytecode EVM                           | Selectors επιλογής συνάρτησης, μετατοπίσεις σε bytes, εκτιμώμενα ορίσματα και δυνατότητα μεταβολής της κατάστασης           | Τοπική είσοδος σε ακατέργαστα bytes ή δεκαεξαδική μορφή σε Linux x64· [οδηγός EVM χωρίς εκτέλεση](../guides/evm/evm-bytecode.md)                              |
-| Βάσεις δεδομένων SQLite                | Πίνακες, στήλες, ευρετήρια, όψεις, triggers και επιλεγμένες γραμμές κανονικών πινάκων                                       | Τοπικό στιγμιότυπο βάσης δεδομένων/WAL· Node.js 24.x >=24.15 ή 26+ με εγγενή όρια SQLite                                                                      |
-| Καταγεγραμμένες καταρρεύσεις στο Linux | Ακατέργαστες εγγραφές notes, καταχωρητές/σήματα κάθε καταγεγραμμένου νήματος και προαιρετικές πιθανές αντιστοιχίσεις μνήμης | pwntools που παρέχει ο χρήστης σε Linux x64· προαιρετικά GDB/pwndbg· [καταγεγραμμένες καταρρεύσεις](../guides/native/recorded-crashes.md)                     |
-| Εγκαταστάσεις επιφάνειας εργασίας      | Υποψήφια περιβάλλοντα εκτέλεσης, αρχεία τεκμηρίωσης, στοιχεία και επόμενα βήματα                                            | Περιορισμένη επιθεώρηση καταλόγων και κεφαλίδων；[Εφαρμογές επιφάνειας εργασίας](../desktop-applications.md)                                                  |
-| JavaScript / Electron                  | Modules, εισαγωγές, source maps, διαδρομές, IPC και σχέσεις με πρόσθετα κώδικα μηχανής                                      | Node.js και npm· [ανάλυση εφαρμογών](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                            |
-| Ιστότοποι                              | Δομή σελίδων, scripts, παρατηρήσεις δικτύου και ζητούμενα στιγμιότυπα οθόνης                                                | Πρόγραμμα περιήγησης της οικογένειας Chrome· [ανάλυση μέσω προγράμματος περιήγησης](../guides/web/browser-observation.md)                                     |
-| Αποθηκευμένες καταγραφές δικτύου       | Αιτήματα, αποκρίσεις, διαθέσιμα δεδομένα φορτίου και θέσεις στην πηγή                                                       | HAR ή SAZ του Fiddler Everywhere· mitmdump σε Linux για την εγγενή μορφή mitmproxy· [οδηγός καταγραφών](../guides/web/web-network-captures.md)                |
-| Assemblies .NET                        | Μεταδεδομένα, εντολές CIL, δηλωμένες εξαρτήσεις από κώδικα μηχανής και συγκρίσεις builds                                    | Καμία πρόσθετη απαίτηση (μόνο στατική ανάλυση)· [οδηγός διαχειριζόμενου κώδικα](../guides/managed/managed-code-analysis.md)                                   |
-| PyInstaller                            | CArchive, PYZ, Python bytecode                                                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                         |
-| APK Android                            | Δηλώσεις manifest, κλάσεις, απομεταγλωττισμένες μέθοδοι και αναφορές                                                        | JADX χωρίς γραφικό περιβάλλον και πλήρες JDK σε Linux/macOS/Windows x64· [οδηγός Android](../guides/android/android-analysis.md)                              |
-| Συσκευές Android                       | Συσκευές, πακέτα, διεργασίες, logs, dumps, στιγμιότυπα οθόνης και μεταφορές APK/αρχείων                                     | adb που παρέχει ο χρήστης (εξομοιωτής ή φυσική συσκευή)· [οδηγός ADB](../guides/android/adb-device-analysis.md)                                               |
-| Έργα JEB                               | Μονάδες έργου από τη μηχανή ανάλυσης, ψηφιακά αποτυπώματα αρχείων και ψευδοκώδικα τύπων/μεθόδων                             | Client JEB που έχει ξεκινήσει ο χρήστης και παρέχει MCP, επιλεγμένος μέσω REA_JEB_MCP_URL· [οδηγός JEB](../providers/jeb-analysis.md)                         |
-| Πόροι Android                          | Αποκωδικοποιημένο manifest, πίνακες συμβολοσειρών, τοπικές ρυθμίσεις και στοιχεία έκδοσης                                   | Launcher του Apktool που παρέχει ο χρήστης· [οδηγός πόρων](../guides/android/apktool-resource-analysis.md)                                                    |
-| Εφαρμογές Flutter                      | Hash του στιγμιότυπου Dart, ψηφιακά αποτυπώματα βιβλιοθηκών ανά ABI και στοιχεία προέλευσης του build της μηχανής           | Καμία πρόσθετη απαίτηση (στατική ανάλυση APK)· [οδηγός Flutter](../guides/android/flutter-analysis.md)                                                        |
-| Firmware                               | Περιοχές, αποτελέσματα εξαγωγής και παραπομπές για ανάλυση κώδικα μηχανής                                                   | Binwalk / Unblob σε Linux· [οδηγός firmware](../guides/firmware/firmware-analysis.md)                                                                         |
-| Καταγεγραμμένα πακέτα                  | Επιλεγμένα πεδία, επαναλαμβανόμενες τιμές, φίλτρα και κανόνες decode-as                                                     | Linux: TShark 4.x + prlimit· [οδηγός καταγραφών](../guides/data/packet-captures.md)                                                                           |
-| Σύνοψη πακέτων                         | Τερματικά σημεία, DNS, TLS SNI, κατανομή πρωτοκόλλων και αιτήματα HTTP                                                      | tshark και capinfos που παρέχει ο χρήστης (επαληθευμένα σε Linux)· [οδηγός pcap](../guides/data/pcap-analysis.md)                                             |
-| Καταγεγραμμένα λογικά σήματα           | Σχολιασμούς αποκωδικοποιητή, εύρη δειγμάτων και διαγνωστικά                                                                 | Linux: sigrok-cli 0.7.2 + prlimit· [καταγραφές σημάτων](../guides/signals/signal-recordings.md)                                                               |
-| Πακέτα και πόροι                       | Καταλόγους αρχείων, ψηφιακά αποτυπώματα, plists, δομή bundles της Apple και εξαγόμενους πόρους                              | [Οδηγός αρχείων και JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [εφαρμογές Apple](../guides/apple/apple-application-analysis.md) |
-| Συμπεριφορά διεργασιών                 | Έξοδο τερματικού, αλληλεπιδράσεις, παρατηρήσεις τερματισμού και συστήματος αρχείων, καθώς και συγκρίσεις εκτελέσεων         | Linux/macOS με εγγενές PTY· [καταγραφή διεργασιών](../guides/runtime/process-capture.md)                                                                      |
-| Αντικείμενα κώδικα GPU                 | Στόχοι CUDA/HIP, παράμετροι και πόροι επιλεγμένων kernels, διατηρημένο κείμενο PTX                                          | Ενσωματωμένη στατική επιθεώρηση ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                        |
-| Αρχεία μοντέλων                        | Μεταδεδομένα GGUF / safetensors, δηλώσεις tensors και παράγωγα σύνολα                                                       | Επιθεώρηση κεφαλίδων· προαιρετικό hash ολόκληρου αρχείου; [GGUF / safetensors](../model-artifacts.md)                                                         |
-| Μεταδεδομένα IL2CPP                    | Εικόνες assemblies Unity global-metadata.dat, ονόματα τύπων/μεθόδων και εύρη δεικτών                                        | Στατική αποκωδικοποίηση εκδόσεων 24, 27, 29, 31, 39· χωρίς Unity                                                                                              |
-| Godot PCK                              | Απογραφή και εξαγωγή αρχείου, αρχικές κεφαλίδες/κατάλογοι και ταυτότητες επιλεγμένου περιεχομένου                           | Στατικές μορφές 2, 3, 4· χωρίς Godot                                                                                                                          |
-| Υπογραφές APK                          | Υπογράφοντες v1/v2/v3/v3.1, αποτυπώματα πιστοποιητικών, εναλλαγή κλειδιών και εσωτερική συνέπεια digests                    | Ενσωματωμένη στατική επιθεώρηση; `inspect_apk_signature`                                                                                                      |
+| Στόχος                                 | Τι επιστρέφει το REA                                                                                                        | Απαιτήσεις και οδηγός                                                                                                               |
+| -------------------------------------- | --------------------------------------------------------------------------------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------- |
+| Δυαδικά αρχεία με κώδικα μηχανής       | Ψευδοκώδικα, κώδικα assembly, συμβολοσειρές, σύμβολα, κλήσεις και αναφορές                                                  | Hopper, Ghidra, IDA ή Kuna· [ανάλυση κώδικα μηχανής](../native-investigation.md)                                                    |
+| Δομή ELF χωρίς εκτέλεση                | Ενότητες, τμήματα, αρχικά σύμβολα/εγγραφές μετεγκατάστασης και ενδείξεις πιθανών μέτρων προστασίας από στατική ανάλυση      | pwntools που παρέχει ο χρήστης σε Linux x64· [διαγνωστικά δυαδικών αρχείων](../binary-diagnostics.md)                               |
+| Δυαδικά αρχεία Go                      | Ενσωματωμένη έκδοση μεταγλωττιστή, modules, αντικαταστάσεις και ρυθμίσεις μεταγλώττισης                                     | Ενσωματωμένη στατική εξέταση ELF/PE/thin Mach-O· δεν απαιτείται εγκατάσταση του Go                                                  |
+| Δυαδικά αρχεία Rust                    | Ενσωματωμένα ονόματα, εκδόσεις, πηγές και σχέσεις εξάρτησης των crates από το cargo-auditable                               | Ενσωματωμένη στατική εξέταση ELF/PE/thin Mach-O· [δυαδικά αρχεία Rust](../rust-binaries.md)                                         |
+| PE certificates                        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                             |
+| PE imports                             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                       |
+| ELF notes                              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                        |
+| Binary hardening                       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                       |
+| Apple IPS crashes                      | .ips metadata, threads, images, registers and crash classes                                                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                       |
+| Linux kernel modules                   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                              |
+| Erlang BEAM                            | IFF chunks, atoms, exports, and tables                                                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                   |
+| Αρχείο WASM                            | Έλεγχο εγκυρότητας, ενότητες, ακριβείς μορφές εισαγωγών/εξαγωγών σε WAT και αποκωδικοποιημένο WAT                           | WABT 1.0.42 που παρέχει ο χρήστης· `inspect_wasm_artifact`                                                                          |
+| Bytecode EVM                           | Selectors επιλογής συνάρτησης, μετατοπίσεις σε bytes, εκτιμώμενα ορίσματα και δυνατότητα μεταβολής της κατάστασης           | Τοπική είσοδος σε ακατέργαστα bytes ή δεκαεξαδική μορφή σε Linux x64· [οδηγός EVM χωρίς εκτέλεση](../evm-bytecode.md)               |
+| Βάσεις δεδομένων SQLite                | Πίνακες, στήλες, ευρετήρια, όψεις, triggers και επιλεγμένες γραμμές κανονικών πινάκων                                       | Τοπικό στιγμιότυπο βάσης δεδομένων/WAL· Node.js 24.x >=24.15 ή 26+ με εγγενή όρια SQLite                                            |
+| Καταγεγραμμένες καταρρεύσεις στο Linux | Ακατέργαστες εγγραφές notes, καταχωρητές/σήματα κάθε καταγεγραμμένου νήματος και προαιρετικές πιθανές αντιστοιχίσεις μνήμης | pwntools που παρέχει ο χρήστης σε Linux x64· προαιρετικά GDB/pwndbg· [καταγεγραμμένες καταρρεύσεις](../recorded-crashes.md)         |
+| Εγκαταστάσεις επιφάνειας εργασίας      | Υποψήφια περιβάλλοντα εκτέλεσης, αρχεία τεκμηρίωσης, στοιχεία και επόμενα βήματα                                            | Περιορισμένη επιθεώρηση καταλόγων και κεφαλίδων；[Εφαρμογές επιφάνειας εργασίας](../desktop-applications.md)                        |
+| JavaScript / Electron                  | Modules, εισαγωγές, source maps, διαδρομές, IPC και σχέσεις με πρόσθετα κώδικα μηχανής                                      | Node.js και npm· [ανάλυση εφαρμογών](../javascript-application-workflows.md); Linux: procps `ps`                                    |
+| Ιστότοποι                              | Δομή σελίδων, scripts, παρατηρήσεις δικτύου και ζητούμενα στιγμιότυπα οθόνης                                                | Πρόγραμμα περιήγησης της οικογένειας Chrome· [ανάλυση μέσω προγράμματος περιήγησης](../browser-observation.md)                      |
+| Αποθηκευμένες καταγραφές δικτύου       | Αιτήματα, αποκρίσεις, διαθέσιμα δεδομένα φορτίου και θέσεις στην πηγή                                                       | HAR ή SAZ του Fiddler Everywhere· mitmdump σε Linux για την εγγενή μορφή mitmproxy· [οδηγός καταγραφών](../web-network-captures.md) |
+| Assemblies .NET                        | Μεταδεδομένα, εντολές CIL, δηλωμένες εξαρτήσεις από κώδικα μηχανής και συγκρίσεις builds                                    | Καμία πρόσθετη απαίτηση (μόνο στατική ανάλυση)· [οδηγός διαχειριζόμενου κώδικα](../managed-code-analysis.md)                        |
+| PyInstaller                            | CArchive, PYZ, Python bytecode                                                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                               |
+| APK Android                            | Δηλώσεις manifest, κλάσεις, απομεταγλωττισμένες μέθοδοι και αναφορές                                                        | JADX χωρίς γραφικό περιβάλλον και πλήρες JDK σε Linux/macOS/Windows x64· [οδηγός Android](../android-analysis.md)                   |
+| Συσκευές Android                       | Συσκευές, πακέτα, διεργασίες, logs, dumps, στιγμιότυπα οθόνης και μεταφορές APK/αρχείων                                     | adb που παρέχει ο χρήστης (εξομοιωτής ή φυσική συσκευή)· [οδηγός ADB](../adb-device-analysis.md)                                    |
+| Έργα JEB                               | Μονάδες έργου από τη μηχανή ανάλυσης, ψηφιακά αποτυπώματα αρχείων και ψευδοκώδικα τύπων/μεθόδων                             | Client JEB που έχει ξεκινήσει ο χρήστης και παρέχει MCP, επιλεγμένος μέσω REA_JEB_MCP_URL· [οδηγός JEB](../jeb-analysis.md)         |
+| Πόροι Android                          | Αποκωδικοποιημένο manifest, πίνακες συμβολοσειρών, τοπικές ρυθμίσεις και στοιχεία έκδοσης                                   | Launcher του Apktool που παρέχει ο χρήστης· [οδηγός πόρων](../apktool-resource-analysis.md)                                         |
+| Εφαρμογές Flutter                      | Hash του στιγμιότυπου Dart, ψηφιακά αποτυπώματα βιβλιοθηκών ανά ABI και στοιχεία προέλευσης του build της μηχανής           | Καμία πρόσθετη απαίτηση (στατική ανάλυση APK)· [οδηγός Flutter](../flutter-analysis.md)                                             |
+| Firmware                               | Περιοχές, αποτελέσματα εξαγωγής και παραπομπές για ανάλυση κώδικα μηχανής                                                   | Binwalk / Unblob σε Linux· [οδηγός firmware](../firmware-analysis.md)                                                               |
+| Καταγεγραμμένα πακέτα                  | Επιλεγμένα πεδία, επαναλαμβανόμενες τιμές, φίλτρα και κανόνες decode-as                                                     | Linux: TShark 4.x + prlimit· [οδηγός καταγραφών](../packet-captures.md)                                                             |
+| Σύνοψη πακέτων                         | Τερματικά σημεία, DNS, TLS SNI, κατανομή πρωτοκόλλων και αιτήματα HTTP                                                      | tshark και capinfos που παρέχει ο χρήστης (επαληθευμένα σε Linux)· [οδηγός pcap](../pcap-analysis.md)                               |
+| Καταγεγραμμένα λογικά σήματα           | Σχολιασμούς αποκωδικοποιητή, εύρη δειγμάτων και διαγνωστικά                                                                 | Linux: sigrok-cli 0.7.2 + prlimit· [καταγραφές σημάτων](../signal-recordings.md)                                                    |
+| Πακέτα και πόροι                       | Καταλόγους αρχείων, ψηφιακά αποτυπώματα, plists, δομή bundles της Apple και εξαγόμενους πόρους                              | [Οδηγός αρχείων και JavaScript](../javascript-artifact-reconstruction.md), [εφαρμογές Apple](../apple-application-analysis.md)      |
+| Συμπεριφορά διεργασιών                 | Έξοδο τερματικού, αλληλεπιδράσεις, παρατηρήσεις τερματισμού και συστήματος αρχείων, καθώς και συγκρίσεις εκτελέσεων         | Linux/macOS με εγγενές PTY· [καταγραφή διεργασιών](../process-capture.md)                                                           |
+| Αντικείμενα κώδικα GPU                 | Στόχοι CUDA/HIP, παράμετροι και πόροι επιλεγμένων kernels, διατηρημένο κείμενο PTX                                          | Ενσωματωμένη στατική επιθεώρηση ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                              |
+| Αρχεία μοντέλων                        | Μεταδεδομένα GGUF / safetensors, δηλώσεις tensors και παράγωγα σύνολα                                                       | Επιθεώρηση κεφαλίδων· προαιρετικό hash ολόκληρου αρχείου; [GGUF / safetensors](../model-artifacts.md)                               |
+| Μεταδεδομένα IL2CPP                    | Εικόνες assemblies Unity global-metadata.dat, ονόματα τύπων/μεθόδων και εύρη δεικτών                                        | Στατική αποκωδικοποίηση εκδόσεων 24, 27, 29, 31, 39· χωρίς Unity                                                                    |
+| Godot PCK                              | Απογραφή και εξαγωγή αρχείου, αρχικές κεφαλίδες/κατάλογοι και ταυτότητες επιλεγμένου περιεχομένου                           | Στατικές μορφές 2, 3, 4· χωρίς Godot                                                                                                |
+| Υπογραφές APK                          | Υπογράφοντες v1/v2/v3/v3.1, αποτυπώματα πιστοποιητικών, εναλλαγή κλειδιών και εσωτερική συνέπεια digests                    | Ενσωματωμένη στατική επιθεώρηση; `inspect_apk_signature`                                                                            |
 
 Για εξέταση δυαδικών αρχείων με κώδικα μηχανής χωρίς εκτέλεση, το REA υποστηρίζει
 επίσης GNU objdump και Rizin που παρέχει ο χρήστης. Δες τον
@@ -201,7 +201,7 @@ npx rea-agents@latest setup
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Οι μορφές κώδικα μηχανής και τα υποστηριζόμενα συστήματα διαφέρουν ανά πάροχο ανάλυσης. Δες τη [ρύθμιση Hopper και Ghidra](../getting-started/installation.md#hopper), τον [οδηγό IDA](../providers/ida-provider.md) (που περιλαμβάνει προαιρετική γέφυρα MCP για κώδικα μηχανής), [Kuna](../kuna-provider.md) και την [πειραματική υποστήριξη Ghidra στα Windows](../providers/windows-ghidra-p0.md). Το Ghidra υποστηρίζει επίσης [ανάλυση DOS 16 bit](../providers/ghidra-dos.md). Για μεγάλα δυαδικά αρχεία, αύξησε το χρονικό όριο εκκίνησης του παρόχου με `REA_GHIDRA_STARTUP_TIMEOUT_MS` ή `REA_HOPPER_STARTUP_TIMEOUT_MS`. Για την επιλογή παρόχου, δες τον [οδηγό CLI](../getting-started/cli.md#choose-a-provider). Έλεγξε τη [διαθεσιμότητα ανά έκδοση](../getting-started/installation.md#released-package-and-main) για λειτουργίες που προστέθηκαν μετά την τελευταία έκδοση στο npm.
+Οι μορφές κώδικα μηχανής και τα υποστηριζόμενα συστήματα διαφέρουν ανά πάροχο ανάλυσης. Δες τη [ρύθμιση Hopper και Ghidra](../installation.md#hopper), τον [οδηγό IDA](../ida-provider.md) (που περιλαμβάνει προαιρετική γέφυρα MCP για κώδικα μηχανής), [Kuna](../kuna-provider.md) και την [πειραματική υποστήριξη Ghidra στα Windows](../windows-ghidra-p0.md). Το Ghidra υποστηρίζει επίσης [ανάλυση DOS 16 bit](../ghidra-dos.md). Για μεγάλα δυαδικά αρχεία, αύξησε το χρονικό όριο εκκίνησης του παρόχου με `REA_GHIDRA_STARTUP_TIMEOUT_MS` ή `REA_HOPPER_STARTUP_TIMEOUT_MS`. Για την επιλογή παρόχου, δες τον [οδηγό CLI](../cli.md#choose-a-provider). Έλεγξε τη [διαθεσιμότητα ανά έκδοση](../installation.md#released-package-and-main) για λειτουργίες που προστέθηκαν μετά την τελευταία έκδοση στο npm.
 
 ## Μελέτες περίπτωσης
 
@@ -280,28 +280,28 @@ agent-env run ./my-env
 <details>
 <summary><strong>Ποιοι agents μπορούν να χρησιμοποιήσουν το REA;</strong></summary>
 
-Κάθε agent που υποστηρίζει τοπικούς MCP servers. Η διαδικασία εγκατάστασης ρυθμίζει τους [υποστηριζόμενους agents](../getting-started/installation.md#supported-agents). Οι υπόλοιποι clients μπορούν να χρησιμοποιήσουν τη [μη αυτόματη καταχώριση MCP](../getting-started/installation.md#mcp-registry).
+Κάθε agent που υποστηρίζει τοπικούς MCP servers. Η διαδικασία εγκατάστασης ρυθμίζει τους [υποστηριζόμενους agents](../installation.md#supported-agents). Οι υπόλοιποι clients μπορούν να χρησιμοποιήσουν τη [μη αυτόματη καταχώριση MCP](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>Χρειάζομαι Hopper, Ghidra, IDA ή Kuna;</strong></summary>
 
-Η εις βάθος ανάλυση κώδικα μηχανής χρησιμοποιεί ένα από αυτά. Η στατική εξέταση JavaScript και .NET λειτουργεί χωρίς μηχανή ανάλυσης κώδικα μηχανής. Η διαδικασία εγκατάστασης μπορεί να εγκαταστήσει το Hopper μετά την έγκρισή σου· το Ghidra, το IDA και το Kuna χρησιμοποιούν τις υπάρχουσες εγκαταστάσεις σου. Δες τη [ρύθμιση παρόχων ανάλυσης](../getting-started/installation.md#hopper).
+Η εις βάθος ανάλυση κώδικα μηχανής χρησιμοποιεί ένα από αυτά. Η στατική εξέταση JavaScript και .NET λειτουργεί χωρίς μηχανή ανάλυσης κώδικα μηχανής. Η διαδικασία εγκατάστασης μπορεί να εγκαταστήσει το Hopper μετά την έγκρισή σου· το Ghidra, το IDA και το Kuna χρησιμοποιούν τις υπάρχουσες εγκαταστάσεις σου. Δες τη [ρύθμιση παρόχων ανάλυσης](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Πρέπει να ξεκινήσω πρώτα το Hopper;</strong></summary>
 
-Το REA ξεκινά το Hopper όταν το χρειάζεται κάποια λειτουργία. Στο macOS, κατά την πρώτη εκκίνηση μπορεί να εμφανιστεί παράθυρο που ζητά να επιλέξεις τη δοκιμαστική λειτουργία ή να ενεργοποιήσεις την άδειά σου. Ολοκλήρωσε αυτό το βήμα στην ίδια συνεδρία χρήστη πριν από την πρώτη λειτουργία CLI/MCP ή εργασία χωρίς επίβλεψη. Άνοιξε το Hopper χειροκίνητα αν χρειαστεί. Δες την [εκκίνηση και αντιμετώπιση προβλημάτων του Hopper](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+Το REA ξεκινά το Hopper όταν το χρειάζεται κάποια λειτουργία. Στο macOS, κατά την πρώτη εκκίνηση μπορεί να εμφανιστεί παράθυρο που ζητά να επιλέξεις τη δοκιμαστική λειτουργία ή να ενεργοποιήσεις την άδειά σου. Ολοκλήρωσε αυτό το βήμα στην ίδια συνεδρία χρήστη πριν από την πρώτη λειτουργία CLI/MCP ή εργασία χωρίς επίβλεψη. Άνοιξε το Hopper χειροκίνητα αν χρειαστεί. Δες την [εκκίνηση και αντιμετώπιση προβλημάτων του Hopper](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>Τι προσφέρει η εγκατάσταση του skill από το skills.sh;</strong></summary>
 
-Το skill παρέχει οδηγίες διερεύνησης για τον agent σου. Χρησιμοποίησε `npx rea-agents setup` για να καταχωρίσεις τον MCP server του REA και να εγκαταστήσεις τις αντίστοιχες οδηγίες. Στη συνέχεια, επανεκκίνησε τον agent σου. Δες την [εγκατάσταση μόνο του skill](../getting-started/installation.md#skill-only-installation).
+Το skill παρέχει οδηγίες διερεύνησης για τον agent σου. Χρησιμοποίησε `npx rea-agents setup` για να καταχωρίσεις τον MCP server του REA και να εγκαταστήσεις τις αντίστοιχες οδηγίες. Στη συνέχεια, επανεκκίνησε τον agent σου. Δες την [εγκατάσταση μόνο του skill](../installation.md#skill-only-installation).
 
 </details>
 
@@ -344,12 +344,12 @@ npx rea-agents@latest setup
 
 Ξεκίνα από τους [οδηγούς με ολοκληρωμένα παραδείγματα](https://rea.tools/guides/) στον ιστότοπο. Για τις ακριβείς επιλογές, τις προϋποθέσεις και τις προδιαγραφές των αποτελεσμάτων:
 
-- [Εγκατάσταση και ρύθμιση](../getting-started/installation.md): καταχώριση agents, ρύθμιση παρόχων ανάλυσης, ενημερώσεις και απεγκατάσταση.
-- [Έλεγχος ετοιμότητας και αντιμετώπιση προβλημάτων](../getting-started/installation.md#check-readiness-for-your-task): διάγνωση ενός agent ή μιας μηχανής ανάλυσης.
-- [CLI και Evidence](../getting-started/cli.md): εντολές, επιλογή παρόχου, στιγμιότυπα, εισαγωγή/εξαγωγή και κωδικοί εξόδου.
-- [Προδιαγραφές MCP](../reference/mcp-contracts.md) και [prompts για agents](../getting-started/mcp-prompts.md): αποτελέσματα εργαλείων, συνεδρίες και καθοδηγούμενες διερευνήσεις.
-- [Κατάλογος εργαλείων](../reference/mcp-contracts.md#generated-catalog): αυτόματα παραγόμενος κατάλογος εργαλείων, παρόχων και εντολών CLI.
-- [Οδικός χάρτης](../development/roadmap.md): προγραμματισμένες εργασίες και παρακολούθηση της ανάπτυξης δυνατοτήτων.
+- [Εγκατάσταση και ρύθμιση](../installation.md): καταχώριση agents, ρύθμιση παρόχων ανάλυσης, ενημερώσεις και απεγκατάσταση.
+- [Έλεγχος ετοιμότητας και αντιμετώπιση προβλημάτων](../installation.md#check-readiness-for-your-task): διάγνωση ενός agent ή μιας μηχανής ανάλυσης.
+- [CLI και Evidence](../cli.md): εντολές, επιλογή παρόχου, στιγμιότυπα, εισαγωγή/εξαγωγή και κωδικοί εξόδου.
+- [Προδιαγραφές MCP](../mcp-contracts.md) και [prompts για agents](../mcp-prompts.md): αποτελέσματα εργαλείων, συνεδρίες και καθοδηγούμενες διερευνήσεις.
+- [Κατάλογος εργαλείων](../mcp-contracts.md#generated-catalog): αυτόματα παραγόμενος κατάλογος εργαλείων, παρόχων και εντολών CLI.
+- [Οδικός χάρτης](../roadmap.md): προγραμματισμένες εργασίες και παρακολούθηση της ανάπτυξης δυνατοτήτων.
 
 Ανάφερε ευπάθειες ακολουθώντας το [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ npx rea-agents@latest setup
 
 Θα χαρούμε να βοηθήσεις στο REA! [Άνοιξε ένα issue](https://github.com/morluto/rea/issues) για να αναφέρεις ένα σφάλμα ή να προτείνεις μια λειτουργία, ή [στείλε ένα pull request](https://github.com/morluto/rea/pulls) για να βελτιώσεις τον κώδικα ή την τεκμηρίωση.
 
-Δες το [CONTRIBUTING.md](../../CONTRIBUTING.md) για τη ρύθμιση του περιβάλλοντος ανάπτυξης και τους ελέγχους, τον [οδηγό δοκιμών](../development/testing.md) για τις διαδικασίες επαλήθευσης και τον [χάρτη αρχιτεκτονικής](../architecture/architecture.mermaid) για τη δομή του έργου.
+Δες το [CONTRIBUTING.md](../../CONTRIBUTING.md) για τη ρύθμιση του περιβάλλοντος ανάπτυξης και τους ελέγχους, τον [οδηγό δοκιμών](../testing.md) για τις διαδικασίες επαλήθευσης και τον [χάρτη αρχιτεκτονικής](../architecture.mermaid) για τη δομή του έργου.
 
 ## Άδεια χρήσης
 

docs/readme/README_es.md

@@ -10,7 +10,7 @@
 **¿Ves una función que te gusta? Entiende cómo funciona, hasta el nivel binario.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Elige tus agentes, revisa los cambios propuestos y apruébalos. La configuración añade el servidor MCP de REA y las instrucciones de trabajo correspondientes, con copias de seguridad de la configuración existente. Reinicia tu agente al terminar.
 
-La configuración admite Claude Code, Codex, Cursor, Gemini CLI, Grok Build y [otros agentes](../getting-started/installation.md#supported-agents). Consulta [instalación y configuración](../getting-started/installation.md) para configurar proveedores y registrar MCP manualmente.
+La configuración admite Claude Code, Codex, Cursor, Gemini CLI, Grok Build y [otros agentes](../installation.md#supported-agents). Consulta [instalación y configuración](../installation.md) para configurar proveedores y registrar MCP manualmente.
 
 MCP usa esquemas de entrada compactos por defecto. Para ver todas las instrucciones de campos y la validación anidada, establece `REA_MCP_INPUT_SCHEMA_PROFILE=full` en el registro MCP. Ambos perfiles conservan todas las herramientas y la misma validación canónica del servidor; consulta la guía de contratos MCP.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Para el análisis nativo, configura primero un proveedor. Consulta la [guía de CLI y Evidence](../getting-started/cli.md) para los comandos nativos, la selección de proveedores, las instantáneas y el uso en scripts.
+Para el análisis nativo, configura primero un proveedor. Consulta la [guía de CLI y Evidence](../cli.md) para los comandos nativos, la selección de proveedores, las instantáneas y el uso en scripts.
 
 ### Actualiza REA
 
@@ -151,45 +151,45 @@ Tu agente llama a REA mediante MCP para inspeccionar el objetivo y seguir el có
 
 REA requiere Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) o 26+ (>=26.12.1), además de npm. Las herramientas adicionales y los sistemas anfitriones compatibles dependen del objetivo:
 
-| Objetivo                    | Qué devuelve REA                                                                                                               | Requisitos y guía                                                                                                                                                     |
-| --------------------------- | ------------------------------------------------------------------------------------------------------------------------------ | --------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Binarios nativos            | Pseudocódigo, ensamblador, cadenas, símbolos, llamadas y referencias                                                           | Hopper, Ghidra, IDA o Kuna; [análisis nativo](../guides/native/native-investigation.md)                                                                               |
-| Estructura ELF sin ejecutar | Secciones, segmentos, símbolos/reubicaciones originales y posibles medidas de mitigación detectadas mediante análisis estático | pwntools proporcionado por quien llama, en Linux x64; [diagnóstico de binarios](../guides/native/binary-diagnostics.md)                                               |
-| PE certificates             | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                                   | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                               |
-| PE imports                  | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                                     | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                         |
-| Bytecode EVM                | Selectores de despacho, desplazamientos en bytes, argumentos inferidos y mutabilidad                                           | Entrada local con bytes sin procesar o representación hexadecimal, en Linux x64; [guía de EVM sin ejecutar](../guides/evm/evm-bytecode.md)                            |
-| Rust binaries               | Embedded cargo-auditable dependency list                                                                                       | [Rust binaries](../rust-binaries.md)                                                                                                                                  |
-| ELF notes                   | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                                | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                          |
-| Binary hardening            | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                            | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                         |
-| Linux kernel modules        | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                                    | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                                |
-| Erlang BEAM                 | IFF chunks, atoms, exports, and tables                                                                                         | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                     |
-| Apple IPS crashes           | .ips metadata, threads, images, registers and crash classes                                                                    | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                         |
-| Fallos de Linux registrados | Registros note sin procesar, registros/señales de cada hilo registrado y posibles correspondencias de memoria opcionales       | pwntools proporcionado por quien llama, en Linux x64; GDB/pwndbg opcionales; [fallos registrados](../guides/native/recorded-crashes.md)                               |
-| Instalaciones de escritorio | Posibles entornos de ejecución, archivos de evidencia, componentes y siguientes pasos                                          | Inspección acotada de directorios y cabeceras；[Aplicaciones de escritorio](../desktop-applications.md)                                                               |
-| JavaScript / Electron       | Módulos, importaciones, mapas de código fuente, rutas, IPC y relaciones con complementos nativos                               | Node.js y npm; [análisis de aplicaciones](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                               |
-| Sitios web                  | Estructura de la página, scripts, observaciones de red y capturas de pantalla solicitadas                                      | Un navegador de la familia Chrome; [análisis del navegador](../guides/web/browser-observation.md)                                                                     |
-| Capturas de red guardadas   | Solicitudes, respuestas, contenido accesible de las cargas útiles y ubicaciones de origen                                      | HAR / Fiddler Everywhere SAZ; mitmdump en Linux para capturas en formato nativo de mitmproxy; [guía de capturas](../guides/web/web-network-captures.md)               |
-| Capturas de paquetes        | Endpoints, DNS, TLS SNI, distribución de protocolos y solicitudes HTTP                                                         | tshark y capinfos suministrados por el autor de la llamada; [guía pcap](../guides/data/pcap-analysis.md)                                                              |
-| Ensamblados .NET            | Metadatos, instrucciones CIL, dependencias nativas declaradas y comparaciones de compilaciones                                 | Inspección estática; [guía de código administrado](../guides/managed/managed-code-analysis.md)                                                                        |
-| PyInstaller                 | CArchive, PYZ, Python bytecode                                                                                                 | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                                 |
-| APK de Android              | Declaraciones del manifiesto, clases, métodos descompilados y referencias                                                      | JADX sin interfaz gráfica y un JDK completo en Linux/macOS/Windows x64; [guía de Android](../guides/android/android-analysis.md)                                      |
-| Dispositivos Android        | Dispositivos, paquetes, procesos, registros, volcados, capturas de pantalla y transferencias de APK/archivos                   | adb suministrado por el autor de la llamada (emulador o dispositivo); [guía de ADB](../guides/android/adb-device-analysis.md)                                         |
-| Proyectos JEB               | Unidades de proyecto del motor, resúmenes de artefactos y pseudocódigo de tipos/métodos                                        | Un cliente JEB iniciado por el autor de la llamada que sirve MCP, seleccionado con REA_JEB_MCP_URL; [guía de JEB](../providers/jeb-analysis.md)                       |
-| Recursos de Android         | Manifiesto decodificado, tablas de cadenas, idiomas y datos de versión                                                         | Lanzador de Apktool suministrado por el autor de la llamada; [guía de recursos](../guides/android/apktool-resource-analysis.md)                                       |
-| Aplicaciones Flutter        | Hash de snapshot de Dart, resúmenes de bibliotecas por ABI y procedencia de compilación del motor                              | Ninguna (análisis APK estático); [guía de Flutter](../guides/android/flutter-analysis.md)                                                                             |
-| Firmware                    | Regiones, resultados de extracción y derivaciones al análisis nativo                                                           | Binwalk / Unblob en Linux; [guía de firmware](../guides/firmware/firmware-analysis.md)                                                                                |
-| Paquetes grabados           | Campos seleccionados, valores repetidos, filtros y reglas de decodificación                                                    | Linux: TShark 4.x + prlimit; [guía de capturas](../guides/data/packet-captures.md)                                                                                    |
-| Señales lógicas grabadas    | Anotaciones del decodificador, rangos de muestras y diagnósticos                                                               | Linux: sigrok-cli 0.7.2 + prlimit; [guía de señales](../guides/signals/signal-recordings.md)                                                                          |
-| Paquetes y recursos         | Inventarios de archivos, resúmenes criptográficos, plists, estructura de paquetes de Apple y recursos extraídos                | [Guía de artefactos y JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [aplicaciones de Apple](../guides/apple/apple-application-analysis.md) |
-| Comportamiento de procesos  | Salida de la terminal, interacciones, observaciones de salida y del sistema de archivos, y comparaciones entre ejecuciones     | Linux/macOS con una PTY nativa; [captura de procesos](../guides/runtime/process-capture.md)                                                                           |
-| Binarios Go                 | Versión del compilador integrada, módulos, reemplazos y ajustes de compilación                                                 | Inspección estática integrada ELF/PE/thin Mach-O; No requiere instalar Go                                                                                             |
-| Bases de datos SQLite       | Tablas, columnas, índices, vistas, disparadores y filas seleccionadas de tablas ordinarias                                     | Instantánea local de base/WAL; Node.js 24.x >=24.15 o 26+ con límites nativos de SQLite                                                                               |
-| Objetos de código GPU       | Destinos CUDA/HIP, parámetros y recursos de kernels seleccionados, texto PTX conservado                                        | Inspección estática integrada ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                  |
-| Archivos de modelos         | Metadatos GGUF / safetensors, declaraciones de tensores y totales derivados                                                    | Inspección de cabeceras; hash completo opcional; [GGUF / safetensors](../model-artifacts.md)                                                                          |
-| Metadatos IL2CPP            | Imágenes de ensamblado Unity global-metadata.dat, nombres de tipos/métodos y rangos de índices                                 | Decodificación estática de versiones 24, 27, 29, 31, 39; sin Unity                                                                                                    |
-| Godot PCK                   | Inventario y extracción, cabeceras/directorios originales e identidad del contenido seleccionado                               | Formatos estáticos 2, 3, 4; sin Godot                                                                                                                                 |
-| Artefactos WASM             | Validación, secciones, formas WAT exactas de importación/exportación y WAT decodificado                                        | Aportado por quien llama WABT 1.0.42; `inspect_wasm_artifact`                                                                                                         |
-| Firmas APK                  | Firmantes v1/v2/v3/v3.1, huellas de certificados, rotación de claves y coherencia interna de resúmenes                         | Inspección estática integrada; `inspect_apk_signature`                                                                                                                |
+| Objetivo                    | Qué devuelve REA                                                                                                               | Requisitos y guía                                                                                                                            |
+| --------------------------- | ------------------------------------------------------------------------------------------------------------------------------ | -------------------------------------------------------------------------------------------------------------------------------------------- |
+| Binarios nativos            | Pseudocódigo, ensamblador, cadenas, símbolos, llamadas y referencias                                                           | Hopper, Ghidra, IDA o Kuna; [análisis nativo](../native-investigation.md)                                                                    |
+| Estructura ELF sin ejecutar | Secciones, segmentos, símbolos/reubicaciones originales y posibles medidas de mitigación detectadas mediante análisis estático | pwntools proporcionado por quien llama, en Linux x64; [diagnóstico de binarios](../binary-diagnostics.md)                                    |
+| PE certificates             | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                                   | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                      |
+| PE imports                  | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                                     | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                |
+| Bytecode EVM                | Selectores de despacho, desplazamientos en bytes, argumentos inferidos y mutabilidad                                           | Entrada local con bytes sin procesar o representación hexadecimal, en Linux x64; [guía de EVM sin ejecutar](../evm-bytecode.md)              |
+| Rust binaries               | Embedded cargo-auditable dependency list                                                                                       | [Rust binaries](../rust-binaries.md)                                                                                                         |
+| ELF notes                   | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                                | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                 |
+| Binary hardening            | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                            | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                |
+| Linux kernel modules        | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                                    | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                       |
+| Erlang BEAM                 | IFF chunks, atoms, exports, and tables                                                                                         | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                            |
+| Apple IPS crashes           | .ips metadata, threads, images, registers and crash classes                                                                    | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                |
+| Fallos de Linux registrados | Registros note sin procesar, registros/señales de cada hilo registrado y posibles correspondencias de memoria opcionales       | pwntools proporcionado por quien llama, en Linux x64; GDB/pwndbg opcionales; [fallos registrados](../recorded-crashes.md)                    |
+| Instalaciones de escritorio | Posibles entornos de ejecución, archivos de evidencia, componentes y siguientes pasos                                          | Inspección acotada de directorios y cabeceras；[Aplicaciones de escritorio](../desktop-applications.md)                                      |
+| JavaScript / Electron       | Módulos, importaciones, mapas de código fuente, rutas, IPC y relaciones con complementos nativos                               | Node.js y npm; [análisis de aplicaciones](../javascript-application-workflows.md); Linux: procps `ps`                                        |
+| Sitios web                  | Estructura de la página, scripts, observaciones de red y capturas de pantalla solicitadas                                      | Un navegador de la familia Chrome; [análisis del navegador](../browser-observation.md)                                                       |
+| Capturas de red guardadas   | Solicitudes, respuestas, contenido accesible de las cargas útiles y ubicaciones de origen                                      | HAR / Fiddler Everywhere SAZ; mitmdump en Linux para capturas en formato nativo de mitmproxy; [guía de capturas](../web-network-captures.md) |
+| Capturas de paquetes        | Endpoints, DNS, TLS SNI, distribución de protocolos y solicitudes HTTP                                                         | tshark y capinfos suministrados por el autor de la llamada; [guía pcap](../pcap-analysis.md)                                                 |
+| Ensamblados .NET            | Metadatos, instrucciones CIL, dependencias nativas declaradas y comparaciones de compilaciones                                 | Inspección estática; [guía de código administrado](../managed-code-analysis.md)                                                              |
+| PyInstaller                 | CArchive, PYZ, Python bytecode                                                                                                 | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                        |
+| APK de Android              | Declaraciones del manifiesto, clases, métodos descompilados y referencias                                                      | JADX sin interfaz gráfica y un JDK completo en Linux/macOS/Windows x64; [guía de Android](../android-analysis.md)                            |
+| Dispositivos Android        | Dispositivos, paquetes, procesos, registros, volcados, capturas de pantalla y transferencias de APK/archivos                   | adb suministrado por el autor de la llamada (emulador o dispositivo); [guía de ADB](../adb-device-analysis.md)                               |
+| Proyectos JEB               | Unidades de proyecto del motor, resúmenes de artefactos y pseudocódigo de tipos/métodos                                        | Un cliente JEB iniciado por el autor de la llamada que sirve MCP, seleccionado con REA_JEB_MCP_URL; [guía de JEB](../jeb-analysis.md)        |
+| Recursos de Android         | Manifiesto decodificado, tablas de cadenas, idiomas y datos de versión                                                         | Lanzador de Apktool suministrado por el autor de la llamada; [guía de recursos](../apktool-resource-analysis.md)                             |
+| Aplicaciones Flutter        | Hash de snapshot de Dart, resúmenes de bibliotecas por ABI y procedencia de compilación del motor                              | Ninguna (análisis APK estático); [guía de Flutter](../flutter-analysis.md)                                                                   |
+| Firmware                    | Regiones, resultados de extracción y derivaciones al análisis nativo                                                           | Binwalk / Unblob en Linux; [guía de firmware](../firmware-analysis.md)                                                                       |
+| Paquetes grabados           | Campos seleccionados, valores repetidos, filtros y reglas de decodificación                                                    | Linux: TShark 4.x + prlimit; [guía de capturas](../packet-captures.md)                                                                       |
+| Señales lógicas grabadas    | Anotaciones del decodificador, rangos de muestras y diagnósticos                                                               | Linux: sigrok-cli 0.7.2 + prlimit; [guía de señales](../signal-recordings.md)                                                                |
+| Paquetes y recursos         | Inventarios de archivos, resúmenes criptográficos, plists, estructura de paquetes de Apple y recursos extraídos                | [Guía de artefactos y JavaScript](../javascript-artifact-reconstruction.md), [aplicaciones de Apple](../apple-application-analysis.md)       |
+| Comportamiento de procesos  | Salida de la terminal, interacciones, observaciones de salida y del sistema de archivos, y comparaciones entre ejecuciones     | Linux/macOS con una PTY nativa; [captura de procesos](../process-capture.md)                                                                 |
+| Binarios Go                 | Versión del compilador integrada, módulos, reemplazos y ajustes de compilación                                                 | Inspección estática integrada ELF/PE/thin Mach-O; No requiere instalar Go                                                                    |
+| Bases de datos SQLite       | Tablas, columnas, índices, vistas, disparadores y filas seleccionadas de tablas ordinarias                                     | Instantánea local de base/WAL; Node.js 24.x >=24.15 o 26+ con límites nativos de SQLite                                                      |
+| Objetos de código GPU       | Destinos CUDA/HIP, parámetros y recursos de kernels seleccionados, texto PTX conservado                                        | Inspección estática integrada ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                         |
+| Archivos de modelos         | Metadatos GGUF / safetensors, declaraciones de tensores y totales derivados                                                    | Inspección de cabeceras; hash completo opcional; [GGUF / safetensors](../model-artifacts.md)                                                 |
+| Metadatos IL2CPP            | Imágenes de ensamblado Unity global-metadata.dat, nombres de tipos/métodos y rangos de índices                                 | Decodificación estática de versiones 24, 27, 29, 31, 39; sin Unity                                                                           |
+| Godot PCK                   | Inventario y extracción, cabeceras/directorios originales e identidad del contenido seleccionado                               | Formatos estáticos 2, 3, 4; sin Godot                                                                                                        |
+| Artefactos WASM             | Validación, secciones, formas WAT exactas de importación/exportación y WAT decodificado                                        | Aportado por quien llama WABT 1.0.42; `inspect_wasm_artifact`                                                                                |
+| Firmas APK                  | Firmantes v1/v2/v3/v3.1, huellas de certificados, rotación de claves y coherencia interna de resúmenes                         | Inspección estática integrada; `inspect_apk_signature`                                                                                       |
 
 La inspección estática de JavaScript y .NET lee los archivos suministrados sin ejecutar la aplicación. La captura en ejecución inicia el objetivo seleccionado o interactúa con él con los permisos de tu usuario; cada guía describe sus efectos.
 
@@ -199,7 +199,7 @@ Para inspeccionar binarios nativos sin conexión, REA también admite GNU objdum
 
 Para binarios grandes, aumenta el plazo de inicio mediante `REA_GHIDRA_STARTUP_TIMEOUT_MS` o `REA_HOPPER_STARTUP_TIMEOUT_MS`.
 
-Los formatos nativos y los sistemas anfitriones compatibles varían según el proveedor. Consulta [configuración de Hopper y Ghidra](../getting-started/installation.md#hopper), la [guía de IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md) y la [compatibilidad experimental de Ghidra en Windows](../providers/windows-ghidra-p0.md). Ghidra también admite [análisis de DOS de 16 bits](../providers/ghidra-dos.md). Para elegir un proveedor, consulta la [guía de CLI](../getting-started/cli.md#choose-a-provider). Comprueba la [disponibilidad por versión](../getting-started/installation.md#released-package-and-main) de las funciones añadidas después de la última versión publicada en npm.
+Los formatos nativos y los sistemas anfitriones compatibles varían según el proveedor. Consulta [configuración de Hopper y Ghidra](../installation.md#hopper), la [guía de IDA](../ida-provider.md), [Kuna](../kuna-provider.md) y la [compatibilidad experimental de Ghidra en Windows](../windows-ghidra-p0.md). Ghidra también admite [análisis de DOS de 16 bits](../ghidra-dos.md). Para elegir un proveedor, consulta la [guía de CLI](../cli.md#choose-a-provider). Comprueba la [disponibilidad por versión](../installation.md#released-package-and-main) de las funciones añadidas después de la última versión publicada en npm.
 
 ## Casos prácticos
 
@@ -278,28 +278,28 @@ REA exporta un entorno ejecutable con una prueba básica que comprueba que arran
 <details>
 <summary><strong>¿Qué agentes pueden usar REA?</strong></summary>
 
-Cualquier agente que admita servidores MCP locales. La configuración prepara los [agentes compatibles](../getting-started/installation.md#supported-agents); otros clientes pueden usar el [registro manual de MCP](../getting-started/installation.md#mcp-registry).
+Cualquier agente que admita servidores MCP locales. La configuración prepara los [agentes compatibles](../installation.md#supported-agents); otros clientes pueden usar el [registro manual de MCP](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>¿Necesito Hopper, Ghidra, IDA o Kuna?</strong></summary>
 
-El análisis nativo en profundidad utiliza uno de ellos. La inspección estática de JavaScript y .NET funciona sin un motor de análisis nativo. La configuración puede instalar Hopper después de tu aprobación; Ghidra, IDA y Kuna usan las instalaciones que ya tienes. Consulta [configuración de proveedores](../getting-started/installation.md#hopper).
+El análisis nativo en profundidad utiliza uno de ellos. La inspección estática de JavaScript y .NET funciona sin un motor de análisis nativo. La configuración puede instalar Hopper después de tu aprobación; Ghidra, IDA y Kuna usan las instalaciones que ya tienes. Consulta [configuración de proveedores](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>¿Tengo que iniciar Hopper primero?</strong></summary>
 
-REA inicia Hopper cuando una operación lo necesita. En macOS, puede aparecer un diálogo al iniciarlo por primera vez para elegir el modo de demostración o activar tu licencia. Consulta [inicio de Hopper y resolución de problemas](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+REA inicia Hopper cuando una operación lo necesita. En macOS, puede aparecer un diálogo al iniciarlo por primera vez para elegir el modo de demostración o activar tu licencia. Consulta [inicio de Hopper y resolución de problemas](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>¿Qué hace la instalación de la skill desde skills.sh?</strong></summary>
 
-La skill proporciona instrucciones de investigación a tu agente. Usa `npx rea-agents setup` para registrar el servidor MCP de REA e instalar las instrucciones correspondientes; después reinicia tu agente. Consulta [instalación solo de la skill](../getting-started/installation.md#skill-only-installation).
+La skill proporciona instrucciones de investigación a tu agente. Usa `npx rea-agents setup` para registrar el servidor MCP de REA e instalar las instrucciones correspondientes; después reinicia tu agente. Consulta [instalación solo de la skill](../installation.md#skill-only-installation).
 
 </details>
 
@@ -342,12 +342,12 @@ Si usas un agente, completa la [actualización de la configuración](#actualiza-
 
 Empieza con las [guías prácticas](https://rea.tools/es/guides/) del sitio web. Para opciones exactas, requisitos y contratos de resultados:
 
-- [Instalación y configuración](../getting-started/installation.md): registro de agentes, configuración de proveedores, actualizaciones y desinstalación.
-- [Preparación y resolución de problemas](../getting-started/installation.md#check-readiness-for-your-task): diagnóstico de un agente o motor de análisis concreto.
-- [CLI y Evidence](../getting-started/cli.md): comandos, selección de proveedores, instantáneas, importación/exportación y estados de salida.
-- [Contratos de MCP](../reference/mcp-contracts.md) y [prompts para agentes](../getting-started/mcp-prompts.md): resultados de herramientas, sesiones e investigaciones guiadas.
-- [Catálogo de herramientas](../reference/mcp-contracts.md#generated-catalog): inventario de herramientas, proveedores y comandos de CLI generado durante la compilación.
-- [Hoja de ruta](../development/roadmap.md): trabajo previsto y seguimiento de capacidades.
+- [Instalación y configuración](../installation.md): registro de agentes, configuración de proveedores, actualizaciones y desinstalación.
+- [Preparación y resolución de problemas](../installation.md#check-readiness-for-your-task): diagnóstico de un agente o motor de análisis concreto.
+- [CLI y Evidence](../cli.md): comandos, selección de proveedores, instantáneas, importación/exportación y estados de salida.
+- [Contratos de MCP](../mcp-contracts.md) y [prompts para agentes](../mcp-prompts.md): resultados de herramientas, sesiones e investigaciones guiadas.
+- [Catálogo de herramientas](../mcp-contracts.md#generated-catalog): inventario de herramientas, proveedores y comandos de CLI generado durante la compilación.
+- [Hoja de ruta](../roadmap.md): trabajo previsto y seguimiento de capacidades.
 
 Informa de vulnerabilidades siguiendo [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ applicable licenses.
 
 ¡Nos encantaría que ayudaras con REA! [Abre una issue](https://github.com/morluto/rea/issues) para comunicar un error o proponer una función, o [envía una pull request](https://github.com/morluto/rea/pulls) para mejorar el código o la documentación.
 
-Consulta [CONTRIBUTING.md](../../CONTRIBUTING.md) para preparar el entorno de desarrollo y las comprobaciones, la [guía de pruebas](../development/testing.md) para los procesos de verificación y el [mapa de arquitectura](../architecture/architecture.mermaid) para la estructura del proyecto.
+Consulta [CONTRIBUTING.md](../../CONTRIBUTING.md) para preparar el entorno de desarrollo y las comprobaciones, la [guía de pruebas](../testing.md) para los procesos de verificación y el [mapa de arquitectura](../architecture.mermaid) para la estructura del proyecto.
 
 ## Licencia
 

docs/readme/README_fa.md

@@ -10,7 +10,7 @@
 **قابلیتی دیده‌اید که دوستش دارید؟ سازوکارش را تا سطح باینری درک کنید.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -72,7 +72,7 @@ npx rea-agents setup
 
 ایجنت‌های موردنظر را انتخاب کنید، تغییرات پیشنهادی را بررسی و تأیید کنید. فرایند راه‌اندازی، سرور MCP مربوط به REA و دستورالعمل‌های گردش‌کار متناظر را اضافه می‌کند و از پیکربندی موجود نسخهٔ پشتیبان می‌گیرد. پس از آن ایجنت خود را مجدداً راه‌اندازی کنید.
 
-راه‌اندازی از Claude Code، Codex، Cursor، Gemini CLI، Grok Build و [ایجنت‌های دیگر](../getting-started/installation.md#supported-agents) پشتیبانی می‌کند. برای پیکربندی ارائه‌دهنده و ثبت دستی MCP، [نصب و راه‌اندازی](../getting-started/installation.md) را ببینید.
+راه‌اندازی از Claude Code، Codex، Cursor، Gemini CLI، Grok Build و [ایجنت‌های دیگر](../installation.md#supported-agents) پشتیبانی می‌کند. برای پیکربندی ارائه‌دهنده و ثبت دستی MCP، [نصب و راه‌اندازی](../installation.md) را ببینید.
 
 MCP به‌طور پیش‌فرض از schema ورودی فشرده استفاده می‌کند. برای راهنمای کامل فیلدها و اعتبارسنجی تو‌در‌تو، در ثبت MCP مقدار `REA_MCP_INPUT_SCHEMA_PROFILE=full` را تنظیم کنید. هر دو حالت همهٔ ابزارها و اعتبارسنجی استاندارد یکسان سرور را نگه می‌دارند؛ راهنمای قراردادهای MCP را ببینید.
 
@@ -101,7 +101,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-برای تحلیل بومی ابتدا یک ارائه‌دهنده پیکربندی کنید. برای دستورات بومی، انتخاب ارائه‌دهنده، snapshotها و اسکریپت‌نویسی، [راهنمای CLI و شواهد](../getting-started/cli.md) را ببینید.
+برای تحلیل بومی ابتدا یک ارائه‌دهنده پیکربندی کنید. برای دستورات بومی، انتخاب ارائه‌دهنده، snapshotها و اسکریپت‌نویسی، [راهنمای CLI و شواهد](../cli.md) را ببینید.
 
 ### به‌روزرسانی REA
 
@@ -143,45 +143,45 @@ npx rea-agents@latest setup
 
 REA به Node.js 22.x (>=22.23.4)، 24.x (>=24.22.1) یا 26+ (>=26.12.1)، به‌همراه npm نیاز دارد. ابزارهای اضافی و پشتیبانی سیستم میزبان به نوع هدف بستگی دارند:
 
-| هدف                    | خروجی REA                                                                           | پیش‌نیازها و راهنما                                                                                                                                         |
-| ---------------------- | ----------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| باینری‌های بومی         | شبه‌کد، اسمبلی، رشته‌ها، نمادها، فراخوانی‌ها و ارجاعات                                 | Hopper، Ghidra، IDA یا Kuna؛ [تحلیل بومی](../guides/native/native-investigation.md)                                                                        |
-| ساختار ELF آفلاین       | بخش‌ها، سگمنت‌ها، نمادها و relocationهای اصلی و گزینه‌های احتمالی کاهش آسیب‌پذیری ایستا | pwntools تأمین‌شده توسط فراخواننده روی Linux x64؛ [تشخیص باینری](../guides/native/binary-diagnostics.md)                                                    |
-| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields        | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                    |
-| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash          | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                              |
-| بایت‌کد EVM             | selectorهای dispatch، offsetهای بایتی، آرگومان‌های استنباط‌شده و قابلیت تغییر وضعیت   | دادهٔ خام/hex محلی روی Linux x64؛ [راهنمای EVM آفلاین](../guides/evm/evm-bytecode.md)                                                                        |
-| Rust binaries          | Embedded cargo-auditable dependency list                                            | [Rust binaries](../rust-binaries.md)                                                                                                                       |
-| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                     | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                               |
-| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                 | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                              |
-| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                         | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                              |
-| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer         | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                     |
-| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                              | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                          |
-| کرش‌های ثبت‌شدهٔ لینوکس   | یادداشت‌های خام، رجیسترها/سیگنال‌های تمام threadهای ثبت‌شده و گزینه‌های احتمالی نگاشت   | pwntools تأمین‌شده توسط فراخواننده روی Linux x64؛ GDB/pwndbg اختیاری؛ [کرش‌های ثبت‌شده](../guides/native/recorded-crashes.md)                                 |
-| نصب‌های دسکتاپ          | نامزدهای زمان اجرا، فایل‌های شاهد، نشانه‌های مؤلفه‌ها و مراحل بعدی                     | بررسی محدود پوشه‌ها و سرآیندها；[برنامه‌های دسکتاپ](../desktop-applications.md)                                                                              |
-| JavaScript / Electron  | ماژول‌ها، importها، source mapها، مسیرها، IPC و ارتباط افزونه‌های بومی                | Node.js و npm؛ [تحلیل برنامه](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                                |
-| وب‌سایت‌ها               | ساختار صفحه، اسکریپت‌ها، مشاهدات شبکه و اسکرین‌شات‌های درخواستی                        | مرورگر مبتنی بر Chrome؛ [تحلیل مرورگر](../guides/web/browser-observation.md)                                                                               |
-| داده‌های ضبط‌شدهٔ شبکه    | درخواست‌ها، پاسخ‌ها، payloadهای آشکارشده و مکان آن‌ها در منبع                          | HAR / Fiddler Everywhere SAZ؛ ابزار mitmdump در لینوکس برای ضبط‌های بومی mitmproxy؛ [راهنمای ضبط شبکه](../guides/web/web-network-captures.md)               |
-| اسمبلی‌های .NET         | فراداده، دستورالعمل‌های CIL، وابستگی‌های بومی اعلام‌شده و مقایسهٔ buildها                | بررسی ایستا؛ [راهنمای کد مدیریت‌شده](../guides/managed/managed-code-analysis.md)                                                                            |
-| PyInstaller            | CArchive, PYZ, Python bytecode                                                      | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                      |
-| فایل‌های APK اندروید    | تعاریف Manifest، کلاس‌ها، متدهای دیکامپایل‌شده و ارجاعات                               | JADX بدون رابط گرافیکی و JDK کامل در Linux/macOS/Windows x64؛ [راهنمای اندروید](../guides/android/android-analysis.md)                                     |
-| دستگاه‌های اندروید      | دستگاه‌ها، بسته‌ها، فرایندها، لاگ‌ها، دامپ‌ها، اسکرین‌شات‌ها و انتقال APK/فایل             | adb تأمین‌شده توسط فراخوان‌کننده (شبیه‌ساز یا دستگاه)؛ [راهنمای ADB](../guides/android/adb-device-analysis.md)                                                |
-| پروژه‌های JEB           | واحدهای پروژه از موتور، هش‌های مصنوع و شبه‌کدِ نوع/متد                                 | یک کلاینت JEB که توسط فراخوان‌کننده اجرا شده و MCP ارائه می‌دهد و با REA_JEB_MCP_URL انتخاب می‌شود؛ [راهنمای JEB](../providers/jeb-analysis.md)                |
-| منابع اندروید          | مانیفست رمزگشایی‌شده، جداول رشته‌ها، زبان‌ها و اطلاعات نسخه                             | راه‌انداز Apktool تأمین‌شده توسط فراخوان‌کننده؛ [راهنمای منابع](../guides/android/apktool-resource-analysis.md)                                               |
-| برنامه‌های فلاتر         | هش اسنپ‌شات دارت، هش کتابخانه‌ها به تفکیک ABI و اصالت بیلد موتور                      | هیچ (تحلیل ایستا APK)؛ [راهنمای فلاتر](../guides/android/flutter-analysis.md)                                                                               |
-| Firmware               | ناحیه‌ها، نتایج استخراج و تحویل به ابزارهای تحلیل بومی                               | Binwalk / Unblob در لینوکس؛ [راهنمای Firmware](../guides/firmware/firmware-analysis.md)                                                                    |
-| بسته‌های ضبط‌شده         | فیلدهای منتخب، مقادیر تکراری، فیلترها و قواعد رمزگشایی                              | Linux: TShark 4.x + prlimit; [راهنمای ضبط بسته](../guides/data/packet-captures.md)                                                                         |
-| ضبط بسته‌ها             | نقاط پایانی، DNS، TLS SNI، توزیع پروتکل و درخواست‌های HTTP                           | tshark و capinfos تأمین‌شده توسط فراخوان‌کننده؛ [راهنمای pcap](../guides/data/pcap-analysis.md)                                                              |
-| سیگنال‌های منطقی ضبط‌شده | توضیحات رمزگشا، بازه‌های نمونه و اطلاعات عیب‌یابی                                      | Linux: sigrok-cli 0.7.2 + prlimit; [راهنمای سیگنال‌ها](../guides/signals/signal-recordings.md)                                                              |
-| بسته‌ها و منابع         | فهرست فایل‌ها، digestها، فایل‌های plist، ساختار bundle اپل و منابع استخراج‌شده         | [راهنمای آرتیفکت و JavaScript](../guides/javascript/javascript-artifact-reconstruction.md)، [برنامه‌های اپل](../guides/apple/apple-application-analysis.md) |
-| رفتار فرایند           | خروجی ترمینال، تعاملات، وضعیت خروج، مشاهدات سیستم فایل و مقایسهٔ اجراها               | Linux/macOS با PTY بومی؛ [ضبط فرایند](../guides/runtime/process-capture.md)                                                                                |
-| باینری‌های Go           | نسخهٔ کامپایلر تعبیه‌شده، ماژول‌ها، جایگزینی‌ها و تنظیمات ساخت                          | بررسی ایستای داخلی ELF/PE/thin Mach-O; نصب Go لازم نیست                                                                                                     |
-| پایگاه‌های SQLite       | جدول‌ها، ستون‌ها، ایندکس‌ها، نماها، تریگرها و سطرهای انتخاب‌شدهٔ جدول‌های عادی            | snapshot محلی پایگاه/WAL؛ Node.js 24.x >=24.15 یا 26+ با محدودیت‌های بومی SQLite                                                                            |
-| اشیای کد GPU           | هدف‌های CUDA/HIP، پارامترها و منابع کرنل‌های انتخاب‌شده و متن PTX نگه‌داری‌شده           | بررسی ایستای داخلی ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                  |
-| فایل‌های مدل            | فرادادهٔ GGUF / safetensors، اعلان تانسورها و مجموع‌های مشتق‌شده                        | بررسی هدر؛ هش کل فایل اختیاری است; [GGUF / safetensors](../model-artifacts.md)                                                                             |
-| فرادادهٔ IL2CPP         | تصاویر اسمبلی، نام نوع‌ها/متدها و بازهٔ ایندکس‌ها در Unity global-metadata.dat         | رمزگشایی ایستای نسخه‌های 24، 27، 29، 31 و 39؛ بدون نیاز به Unity                                                                                            |
-| Godot PCK              | فهرست و استخراج آرشیو، اطلاعات اصلی هدر/دایرکتوری و هویت محتوای انتخاب‌شده            | قالب‌های ایستای 2، 3 و 4؛ بدون نیاز به Godot                                                                                                                |
-| مصنوعات WASM           | اعتبارسنجی، بخش‌ها، فرم دقیق WAT ورودی/خروجی و WAT رمزگشایی‌شده                       | تهیه‌شده توسط کاربر WABT 1.0.42; `inspect_wasm_artifact`                                                                                                    |
-| امضاهای APK            | امضاکنندگان v1/v2/v3/v3.1، اثر انگشت گواهی، چرخش کلید و سازگاری داخلی digest        | بررسی ایستای داخلی; `inspect_apk_signature`                                                                                                                |
+| هدف                    | خروجی REA                                                                           | پیش‌نیازها و راهنما                                                                                                                |
+| ---------------------- | ----------------------------------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------- |
+| باینری‌های بومی         | شبه‌کد، اسمبلی، رشته‌ها، نمادها، فراخوانی‌ها و ارجاعات                                 | Hopper، Ghidra، IDA یا Kuna؛ [تحلیل بومی](../native-investigation.md)                                                             |
+| ساختار ELF آفلاین       | بخش‌ها، سگمنت‌ها، نمادها و relocationهای اصلی و گزینه‌های احتمالی کاهش آسیب‌پذیری ایستا | pwntools تأمین‌شده توسط فراخواننده روی Linux x64؛ [تشخیص باینری](../binary-diagnostics.md)                                         |
+| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields        | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                           |
+| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash          | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                     |
+| بایت‌کد EVM             | selectorهای dispatch، offsetهای بایتی، آرگومان‌های استنباط‌شده و قابلیت تغییر وضعیت   | دادهٔ خام/hex محلی روی Linux x64؛ [راهنمای EVM آفلاین](../evm-bytecode.md)                                                          |
+| Rust binaries          | Embedded cargo-auditable dependency list                                            | [Rust binaries](../rust-binaries.md)                                                                                              |
+| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                     | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                      |
+| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                 | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                     |
+| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                         | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                     |
+| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer         | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                            |
+| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                              | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                 |
+| کرش‌های ثبت‌شدهٔ لینوکس   | یادداشت‌های خام، رجیسترها/سیگنال‌های تمام threadهای ثبت‌شده و گزینه‌های احتمالی نگاشت   | pwntools تأمین‌شده توسط فراخواننده روی Linux x64؛ GDB/pwndbg اختیاری؛ [کرش‌های ثبت‌شده](../recorded-crashes.md)                      |
+| نصب‌های دسکتاپ          | نامزدهای زمان اجرا، فایل‌های شاهد، نشانه‌های مؤلفه‌ها و مراحل بعدی                     | بررسی محدود پوشه‌ها و سرآیندها；[برنامه‌های دسکتاپ](../desktop-applications.md)                                                     |
+| JavaScript / Electron  | ماژول‌ها، importها، source mapها، مسیرها، IPC و ارتباط افزونه‌های بومی                | Node.js و npm؛ [تحلیل برنامه](../javascript-application-workflows.md); Linux: procps `ps`                                         |
+| وب‌سایت‌ها               | ساختار صفحه، اسکریپت‌ها، مشاهدات شبکه و اسکرین‌شات‌های درخواستی                        | مرورگر مبتنی بر Chrome؛ [تحلیل مرورگر](../browser-observation.md)                                                                 |
+| داده‌های ضبط‌شدهٔ شبکه    | درخواست‌ها، پاسخ‌ها، payloadهای آشکارشده و مکان آن‌ها در منبع                          | HAR / Fiddler Everywhere SAZ؛ ابزار mitmdump در لینوکس برای ضبط‌های بومی mitmproxy؛ [راهنمای ضبط شبکه](../web-network-captures.md) |
+| اسمبلی‌های .NET         | فراداده، دستورالعمل‌های CIL، وابستگی‌های بومی اعلام‌شده و مقایسهٔ buildها                | بررسی ایستا؛ [راهنمای کد مدیریت‌شده](../managed-code-analysis.md)                                                                  |
+| PyInstaller            | CArchive, PYZ, Python bytecode                                                      | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                             |
+| فایل‌های APK اندروید    | تعاریف Manifest، کلاس‌ها، متدهای دیکامپایل‌شده و ارجاعات                               | JADX بدون رابط گرافیکی و JDK کامل در Linux/macOS/Windows x64؛ [راهنمای اندروید](../android-analysis.md)                           |
+| دستگاه‌های اندروید      | دستگاه‌ها، بسته‌ها، فرایندها، لاگ‌ها، دامپ‌ها، اسکرین‌شات‌ها و انتقال APK/فایل             | adb تأمین‌شده توسط فراخوان‌کننده (شبیه‌ساز یا دستگاه)؛ [راهنمای ADB](../adb-device-analysis.md)                                      |
+| پروژه‌های JEB           | واحدهای پروژه از موتور، هش‌های مصنوع و شبه‌کدِ نوع/متد                                 | یک کلاینت JEB که توسط فراخوان‌کننده اجرا شده و MCP ارائه می‌دهد و با REA_JEB_MCP_URL انتخاب می‌شود؛ [راهنمای JEB](../jeb-analysis.md) |
+| منابع اندروید          | مانیفست رمزگشایی‌شده، جداول رشته‌ها، زبان‌ها و اطلاعات نسخه                             | راه‌انداز Apktool تأمین‌شده توسط فراخوان‌کننده؛ [راهنمای منابع](../apktool-resource-analysis.md)                                     |
+| برنامه‌های فلاتر         | هش اسنپ‌شات دارت، هش کتابخانه‌ها به تفکیک ABI و اصالت بیلد موتور                      | هیچ (تحلیل ایستا APK)؛ [راهنمای فلاتر](../flutter-analysis.md)                                                                     |
+| Firmware               | ناحیه‌ها، نتایج استخراج و تحویل به ابزارهای تحلیل بومی                               | Binwalk / Unblob در لینوکس؛ [راهنمای Firmware](../firmware-analysis.md)                                                           |
+| بسته‌های ضبط‌شده         | فیلدهای منتخب، مقادیر تکراری، فیلترها و قواعد رمزگشایی                              | Linux: TShark 4.x + prlimit; [راهنمای ضبط بسته](../packet-captures.md)                                                            |
+| ضبط بسته‌ها             | نقاط پایانی، DNS، TLS SNI، توزیع پروتکل و درخواست‌های HTTP                           | tshark و capinfos تأمین‌شده توسط فراخوان‌کننده؛ [راهنمای pcap](../pcap-analysis.md)                                                 |
+| سیگنال‌های منطقی ضبط‌شده | توضیحات رمزگشا، بازه‌های نمونه و اطلاعات عیب‌یابی                                      | Linux: sigrok-cli 0.7.2 + prlimit; [راهنمای سیگنال‌ها](../signal-recordings.md)                                                    |
+| بسته‌ها و منابع         | فهرست فایل‌ها، digestها، فایل‌های plist، ساختار bundle اپل و منابع استخراج‌شده         | [راهنمای آرتیفکت و JavaScript](../javascript-artifact-reconstruction.md)، [برنامه‌های اپل](../apple-application-analysis.md)       |
+| رفتار فرایند           | خروجی ترمینال، تعاملات، وضعیت خروج، مشاهدات سیستم فایل و مقایسهٔ اجراها               | Linux/macOS با PTY بومی؛ [ضبط فرایند](../process-capture.md)                                                                      |
+| باینری‌های Go           | نسخهٔ کامپایلر تعبیه‌شده، ماژول‌ها، جایگزینی‌ها و تنظیمات ساخت                          | بررسی ایستای داخلی ELF/PE/thin Mach-O; نصب Go لازم نیست                                                                            |
+| پایگاه‌های SQLite       | جدول‌ها، ستون‌ها، ایندکس‌ها، نماها، تریگرها و سطرهای انتخاب‌شدهٔ جدول‌های عادی            | snapshot محلی پایگاه/WAL؛ Node.js 24.x >=24.15 یا 26+ با محدودیت‌های بومی SQLite                                                   |
+| اشیای کد GPU           | هدف‌های CUDA/HIP، پارامترها و منابع کرنل‌های انتخاب‌شده و متن PTX نگه‌داری‌شده           | بررسی ایستای داخلی ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                         |
+| فایل‌های مدل            | فرادادهٔ GGUF / safetensors، اعلان تانسورها و مجموع‌های مشتق‌شده                        | بررسی هدر؛ هش کل فایل اختیاری است; [GGUF / safetensors](../model-artifacts.md)                                                    |
+| فرادادهٔ IL2CPP         | تصاویر اسمبلی، نام نوع‌ها/متدها و بازهٔ ایندکس‌ها در Unity global-metadata.dat         | رمزگشایی ایستای نسخه‌های 24، 27، 29، 31 و 39؛ بدون نیاز به Unity                                                                   |
+| Godot PCK              | فهرست و استخراج آرشیو، اطلاعات اصلی هدر/دایرکتوری و هویت محتوای انتخاب‌شده            | قالب‌های ایستای 2، 3 و 4؛ بدون نیاز به Godot                                                                                       |
+| مصنوعات WASM           | اعتبارسنجی، بخش‌ها، فرم دقیق WAT ورودی/خروجی و WAT رمزگشایی‌شده                       | تهیه‌شده توسط کاربر WABT 1.0.42; `inspect_wasm_artifact`                                                                           |
+| امضاهای APK            | امضاکنندگان v1/v2/v3/v3.1، اثر انگشت گواهی، چرخش کلید و سازگاری داخلی digest        | بررسی ایستای داخلی; `inspect_apk_signature`                                                                                       |
 
 بررسی ایستای JavaScript و .NET فایل‌های ارائه‌شده را بدون اجرای برنامه می‌خواند. ضبط زمان اجرا، هدف انتخاب‌شده را با مجوزهای کاربری شما اجرا می‌کند یا با آن تعامل دارد؛ آثار این عملیات در راهنمای مربوط به هر نوع ضبط توضیح داده شده‌اند.
 
@@ -191,7 +191,7 @@ REA به Node.js 22.x (>=22.23.4)، 24.x (>=24.22.1) یا 26+ (>=26.12.1)، به
 
 برای باینری‌های بزرگ، مهلت شروع را با `REA_GHIDRA_STARTUP_TIMEOUT_MS` یا `REA_HOPPER_STARTUP_TIMEOUT_MS` افزایش دهید.
 
-فرمت‌های بومی و پشتیبانی سیستم میزبان بر اساس ارائه‌دهنده متفاوت‌اند. [راه‌اندازی Hopper و Ghidra](../getting-started/installation.md#hopper)، [راهنمای IDA](../providers/ida-provider.md)، [Kuna](../kuna-provider.md) و [پشتیبانی آزمایشی Ghidra در ویندوز](../providers/windows-ghidra-p0.md) را ببینید. Ghidra همچنین از [تحلیل DOS شانزده‌بیتی](../providers/ghidra-dos.md) پشتیبانی می‌کند. برای انتخاب ارائه‌دهنده، به [راهنمای CLI](../getting-started/cli.md#choose-a-provider) مراجعه کنید. برای قابلیت‌هایی که پس از آخرین انتشار npm اضافه شده‌اند، [وضعیت انتشار](../getting-started/installation.md#released-package-and-main) را بررسی کنید.
+فرمت‌های بومی و پشتیبانی سیستم میزبان بر اساس ارائه‌دهنده متفاوت‌اند. [راه‌اندازی Hopper و Ghidra](../installation.md#hopper)، [راهنمای IDA](../ida-provider.md)، [Kuna](../kuna-provider.md) و [پشتیبانی آزمایشی Ghidra در ویندوز](../windows-ghidra-p0.md) را ببینید. Ghidra همچنین از [تحلیل DOS شانزده‌بیتی](../ghidra-dos.md) پشتیبانی می‌کند. برای انتخاب ارائه‌دهنده، به [راهنمای CLI](../cli.md#choose-a-provider) مراجعه کنید. برای قابلیت‌هایی که پس از آخرین انتشار npm اضافه شده‌اند، [وضعیت انتشار](../installation.md#released-package-and-main) را بررسی کنید.
 
 ## نمونه‌های عملی
 
@@ -269,25 +269,25 @@ REA محیطی آمادهٔ اجرا همراه با یک آزمون ساده ب
 
 <details><summary><strong>کدام ایجنت‌ها می‌توانند از REA استفاده کنند؟</strong></summary>
 
-هر ایجنتی که از سرورهای MCP محلی پشتیبانی کند. فرایند setup، [ایجنت‌های پشتیبانی‌شده](../getting-started/installation.md#supported-agents) را پیکربندی می‌کند؛ سایر کلاینت‌ها می‌توانند از [ثبت دستی MCP](../getting-started/installation.md#mcp-registry) استفاده کنند.
+هر ایجنتی که از سرورهای MCP محلی پشتیبانی کند. فرایند setup، [ایجنت‌های پشتیبانی‌شده](../installation.md#supported-agents) را پیکربندی می‌کند؛ سایر کلاینت‌ها می‌توانند از [ثبت دستی MCP](../installation.md#mcp-registry) استفاده کنند.
 
 </details>
 
 <details><summary><strong>آیا به Hopper، Ghidra، IDA یا Kuna نیاز دارم؟</strong></summary>
 
-تحلیل عمیق بومی به یکی از آن‌ها نیاز دارد. بررسی ایستای JavaScript و .NET بدون موتور تحلیل بومی کار می‌کند. setup می‌تواند با تأیید شما Hopper را نصب کند؛ Ghidra، IDA و Kuna از نصب‌های موجود شما استفاده می‌کنند. [راه‌اندازی ارائه‌دهنده](../getting-started/installation.md#hopper) را ببینید.
+تحلیل عمیق بومی به یکی از آن‌ها نیاز دارد. بررسی ایستای JavaScript و .NET بدون موتور تحلیل بومی کار می‌کند. setup می‌تواند با تأیید شما Hopper را نصب کند؛ Ghidra، IDA و Kuna از نصب‌های موجود شما استفاده می‌کنند. [راه‌اندازی ارائه‌دهنده](../installation.md#hopper) را ببینید.
 
 </details>
 
 <details><summary><strong>آیا باید ابتدا Hopper را اجرا کنم؟</strong></summary>
 
-REA زمانی که عملیاتی به Hopper نیاز داشته باشد آن را اجرا می‌کند. در macOS، ممکن است هنگام نخستین اجرا پنجره‌ای برای انتخاب حالت آزمایشی یا فعال‌سازی مجوز نمایش داده شود. [راه‌اندازی Hopper و رفع اشکال](../getting-started/installation.md#launcher-paths-and-troubleshooting) را ببینید.
+REA زمانی که عملیاتی به Hopper نیاز داشته باشد آن را اجرا می‌کند. در macOS، ممکن است هنگام نخستین اجرا پنجره‌ای برای انتخاب حالت آزمایشی یا فعال‌سازی مجوز نمایش داده شود. [راه‌اندازی Hopper و رفع اشکال](../installation.md#launcher-paths-and-troubleshooting) را ببینید.
 
 </details>
 
 <details><summary><strong>نصب skill از skills.sh چه کاری انجام می‌دهد؟</strong></summary>
 
-این skill دستورالعمل‌های بررسی را برای ایجنت فراهم می‌کند. برای ثبت سرور MCP مربوط به REA و نصب دستورالعمل‌های متناظر، `npx rea-agents setup` را اجرا کنید و سپس ایجنت را مجدداً راه‌اندازی کنید. [نصب مستقل skill](../getting-started/installation.md#skill-only-installation) را ببینید.
+این skill دستورالعمل‌های بررسی را برای ایجنت فراهم می‌کند. برای ثبت سرور MCP مربوط به REA و نصب دستورالعمل‌های متناظر، `npx rea-agents setup` را اجرا کنید و سپس ایجنت را مجدداً راه‌اندازی کنید. [نصب مستقل skill](../installation.md#skill-only-installation) را ببینید.
 
 </details>
 
@@ -327,12 +327,12 @@ npx rea-agents@latest setup
 
 از [راهنماهای عملی وب‌سایت](https://rea.tools/fa/guides/) شروع کنید. برای گزینه‌های دقیق، پیش‌نیازها و قراردادهای خروجی:
 
-- [نصب و راه‌اندازی](../getting-started/installation.md): ثبت ایجنت، پیکربندی ارائه‌دهنده، به‌روزرسانی و حذف نصب.
-- [آمادگی و رفع اشکال](../getting-started/installation.md#check-readiness-for-your-task): عیب‌یابی یک ایجنت یا موتور تحلیل.
-- [CLI و شواهد](../getting-started/cli.md): دستورات، انتخاب ارائه‌دهنده، snapshotها، ورود/خروج داده و وضعیت‌های خروج.
-- [قراردادهای MCP](../reference/mcp-contracts.md) و [پرامپت‌های ایجنت](../getting-started/mcp-prompts.md): نتایج ابزارها، نشست‌ها و بررسی‌های هدایت‌شده.
-- [فهرست ابزارها](../reference/mcp-contracts.md#generated-catalog): فهرست تولیدشده هنگام build از ابزارها، ارائه‌دهندگان و دستورات CLI.
-- [نقشهٔ راه](../development/roadmap.md): برنامه‌های آینده و پیگیری قابلیت‌ها.
+- [نصب و راه‌اندازی](../installation.md): ثبت ایجنت، پیکربندی ارائه‌دهنده، به‌روزرسانی و حذف نصب.
+- [آمادگی و رفع اشکال](../installation.md#check-readiness-for-your-task): عیب‌یابی یک ایجنت یا موتور تحلیل.
+- [CLI و شواهد](../cli.md): دستورات، انتخاب ارائه‌دهنده، snapshotها، ورود/خروج داده و وضعیت‌های خروج.
+- [قراردادهای MCP](../mcp-contracts.md) و [پرامپت‌های ایجنت](../mcp-prompts.md): نتایج ابزارها، نشست‌ها و بررسی‌های هدایت‌شده.
+- [فهرست ابزارها](../mcp-contracts.md#generated-catalog): فهرست تولیدشده هنگام build از ابزارها، ارائه‌دهندگان و دستورات CLI.
+- [نقشهٔ راه](../roadmap.md): برنامه‌های آینده و پیگیری قابلیت‌ها.
 
 آسیب‌پذیری‌ها را از طریق [SECURITY.md](../../SECURITY.md) گزارش کنید.
 
@@ -358,7 +358,7 @@ applicable licenses.
 
 از کمک شما به REA استقبال می‌کنیم! برای گزارش خطا یا پیشنهاد قابلیت، یک [issue باز کنید](https://github.com/morluto/rea/issues) یا برای بهبود کد و مستندات [pull request بفرستید](https://github.com/morluto/rea/pulls).
 
-برای راه‌اندازی محیط توسعه و بررسی‌ها، [CONTRIBUTING.md](../../CONTRIBUTING.md)، برای مراحل اعتبارسنجی [آزمایش‌ها](../development/testing.md) و برای ساختار پروژه [نقشهٔ معماری](../architecture/architecture.mermaid) را ببینید.
+برای راه‌اندازی محیط توسعه و بررسی‌ها، [CONTRIBUTING.md](../../CONTRIBUTING.md)، برای مراحل اعتبارسنجی [آزمایش‌ها](../testing.md) و برای ساختار پروژه [نقشهٔ معماری](../architecture.mermaid) را ببینید.
 
 ## مجوز
 

docs/readme/README_fr.md

@@ -10,7 +10,7 @@
 **Repérez une fonctionnalité qui vous plaît. Comprenez son fonctionnement, jusqu'au niveau du binaire.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Choisissez vos agents, vérifiez les modifications proposées et approuvez-les. Setup ajoute le serveur MCP de REA et les instructions de workflow correspondantes, et sauvegarde la configuration existante. Redémarrez ensuite votre agent.
 
-Setup prend en charge Claude Code, Codex, Cursor, Gemini CLI, Grok Build et [d'autres agents](../getting-started/installation.md#supported-agents). Consultez [Installation et configuration](../getting-started/installation.md) pour la configuration des fournisseurs et l'enregistrement MCP manuel.
+Setup prend en charge Claude Code, Codex, Cursor, Gemini CLI, Grok Build et [d'autres agents](../installation.md#supported-agents). Consultez [Installation et configuration](../installation.md) pour la configuration des fournisseurs et l'enregistrement MCP manuel.
 
 MCP utilise par défaut des schémas d’entrée compacts. Pour les descriptions complètes des champs et de la validation imbriquée, définissez `REA_MCP_INPUT_SCHEMA_PROFILE=full` dans l’enregistrement MCP. Les deux profils conservent tous les outils et la même validation canonique du serveur ; voir le guide des contrats MCP.
 
@@ -110,7 +110,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Pour l'analyse native, configurez d'abord un fournisseur. Consultez le [guide CLI et Evidence](../getting-started/cli.md) pour les commandes natives, le choix du fournisseur, les snapshots et l'utilisation dans des scripts.
+Pour l'analyse native, configurez d'abord un fournisseur. Consultez le [guide CLI et Evidence](../cli.md) pour les commandes natives, le choix du fournisseur, les snapshots et l'utilisation dans des scripts.
 
 ### Mettre à jour REA
 
@@ -150,45 +150,45 @@ Votre agent appelle REA via MCP pour inspecter la cible et suivre le code pertin
 
 REA nécessite Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) ou 26+ (>=26.12.1), ainsi que npm. Les outils supplémentaires et les hôtes pris en charge dépendent de la cible :
 
-| Cible                        | Ce que REA renvoie                                                                                          | Prérequis et guide                                                                                                                                               |
-| ---------------------------- | ----------------------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Binaires natifs              | Pseudo-code, assembleur, chaînes, symboles, appels et références                                            | Hopper, Ghidra, IDA ou Kuna ; [analyse native](../guides/native/native-investigation.md)                                                                         |
-| Structure ELF hors ligne     | Sections, segments, symboles et relocations d'origine, et protections statiques candidates                  | pwntools fourni par l'utilisateur sous Linux x64 ; [diagnostics binaires](../guides/native/binary-diagnostics.md)                                                |
-| PE certificates              | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                          |
-| PE imports                   | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                    |
-| Artefact WASM                | Validation, sections, formes WAT exactes d'import/export et WAT décodé                                      | WABT 1.0.42 fourni par l'utilisateur ; `inspect_wasm_artifact`                                                                                                   |
-| Bytecode EVM                 | Sélecteurs de dispatch, offsets en octets, arguments inférés et mutabilité                                  | Fichier local brut ou hexadécimal sous Linux x64 ; [guide EVM hors ligne](../guides/evm/evm-bytecode.md)                                                         |
-| Rust binaries                | Embedded cargo-auditable dependency list                                                                    | [Rust binaries](../rust-binaries.md)                                                                                                                             |
-| ELF notes                    | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                     |
-| Binary hardening             | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                    |
-| Linux kernel modules         | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                           |
-| Erlang BEAM                  | IFF chunks, atoms, exports, and tables                                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                |
-| Apple IPS crashes            | .ips metadata, threads, images, registers and crash classes                                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                    |
-| Crashs Linux enregistrés     | Notes brutes, registres et signaux de chaque thread enregistré, et correspondances de mappings facultatives | pwntools fourni par l'utilisateur sous Linux x64 ; GDB/pwndbg en option ; [crashs enregistrés](../guides/native/recorded-crashes.md)                             |
-| Installations de bureau      | Environnements candidats, fichiers justificatifs, composants et étapes suivantes                            | Inspection bornée des répertoires et en-têtes；[Applications de bureau](../desktop-applications.md)                                                              |
-| JavaScript / Electron        | Modules, imports, source maps, routes, IPC et relations avec les modules natifs                             | Node.js et npm ; [analyse d'applications](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                          |
-| Sites web                    | Structure des pages, scripts, observations réseau et captures d'écran demandées                             | Un navigateur de la famille Chrome ; [analyse du navigateur](../guides/web/browser-observation.md)                                                               |
-| Captures réseau enregistrées | Requêtes, réponses, payloads exposés et emplacements dans le code source                                    | HAR / Fiddler Everywhere SAZ ; mitmdump sous Linux pour les captures mitmproxy natives ; [guide des captures](../guides/web/web-network-captures.md)             |
-| Captures de paquets          | Points de terminaison, DNS, TLS SNI, distribution des protocoles et requêtes HTTP                           | tshark et capinfos fournis par l'appelant ; [guide pcap](../guides/data/pcap-analysis.md)                                                                        |
-| Assemblys .NET               | Métadonnées, instructions CIL, dépendances natives déclarées et comparaisons de builds                      | Inspection statique ; [guide du code managé](../guides/managed/managed-code-analysis.md)                                                                         |
-| PyInstaller                  | CArchive, PYZ, Python bytecode                                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                            |
-| APK Android                  | Déclarations du manifeste, classes, méthodes décompilées et références                                      | JADX headless et un JDK complet sous Linux/macOS/Windows x64 ; [guide Android](../guides/android/android-analysis.md)                                            |
-| Appareils Android            | Appareils, paquets, processus, journaux, dumps, captures d'écran et transferts d'APK/fichiers               | adb fourni par l'appelant (émulateur ou appareil) ; [guide ADB](../guides/android/adb-device-analysis.md)                                                        |
-| Projets JEB                  | Unités de projet fournies par le moteur, condensés d'artefacts et pseudo-code de types/méthodes             | Un client JEB démarré par l'appelant servant MCP, sélectionné via REA_JEB_MCP_URL ; [guide JEB](../providers/jeb-analysis.md)                                    |
-| Ressources Android           | Manifeste décodé, tables de chaînes, langues et faits de version                                            | Lanceur Apktool fourni par l'appelant ; [guide des ressources](../guides/android/apktool-resource-analysis.md)                                                   |
-| Applications Flutter         | Empreinte de snapshot Dart, condensés de bibliothèques par ABI et provenance de build du moteur             | Aucune (analyse APK statique) ; [guide Flutter](../guides/android/flutter-analysis.md)                                                                           |
-| Firmware                     | Régions, résultats d'extraction et passage de relais vers l'analyse native                                  | Binwalk / Unblob sous Linux ; [guide firmware](../guides/firmware/firmware-analysis.md)                                                                          |
-| Paquets enregistrés          | Champs sélectionnés, valeurs répétées, filtres et règles de décodage                                        | Linux: TShark 4.x + prlimit; [guide des captures](../guides/data/packet-captures.md)                                                                             |
-| Signaux logiques enregistrés | Annotations du décodeur, plages d’échantillons et diagnostics                                               | Linux: sigrok-cli 0.7.2 + prlimit; [guide des signaux](../guides/signals/signal-recordings.md)                                                                   |
-| Paquets et ressources        | Inventaires de fichiers, empreintes, plists, anatomie des bundles Apple et ressources extraites             | [Guide artefacts et JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [applications Apple](../guides/apple/apple-application-analysis.md) |
-| Comportement des processus   | Sortie du terminal, interactions, code de sortie, observations du système de fichiers et comparaisons       | Linux/macOS avec un PTY natif ; [capture de processus](../guides/runtime/process-capture.md)                                                                     |
-| Binaires Go                  | Version du compilateur embarquée, modules, remplacements et paramètres de compilation                       | Inspection statique intégrée ELF/PE/thin Mach-O; Aucune installation de Go nécessaire                                                                            |
-| Bases SQLite                 | Tables, colonnes, index, vues, déclencheurs et lignes sélectionnées de tables ordinaires                    | Instantané local base/WAL ; Node.js 24.x >=24.15 ou 26+ avec limites SQLite natives                                                                              |
-| Objets de code GPU           | Cibles CUDA/HIP, paramètres et ressources de noyaux sélectionnés, texte PTX conservé                        | Inspection statique intégrée ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                              |
-| Fichiers de modèles          | Métadonnées GGUF / safetensors, déclarations de tenseurs et totaux dérivés                                  | Lecture des en-têtes ; empreinte complète facultative; [GGUF / safetensors](../model-artifacts.md)                                                               |
-| Métadonnées IL2CPP           | Images d’assemblages Unity global-metadata.dat, noms de types/méthodes et plages d’index                    | Décodage statique des versions 24, 27, 29, 31, 39 ; sans Unity                                                                                                   |
-| Godot PCK                    | Inventaire et extraction d’archive, en-têtes/répertoires originaux et identités des contenus sélectionnés   | Formats statiques 2, 3, 4 ; sans Godot                                                                                                                           |
-| Signatures APK               | Signataires v1/v2/v3/v3.1, empreintes de certificats, rotation des clés et cohérence interne des condensats | Inspection statique intégrée; `inspect_apk_signature`                                                                                                            |
+| Cible                        | Ce que REA renvoie                                                                                          | Prérequis et guide                                                                                                                        |
+| ---------------------------- | ----------------------------------------------------------------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------- |
+| Binaires natifs              | Pseudo-code, assembleur, chaînes, symboles, appels et références                                            | Hopper, Ghidra, IDA ou Kuna ; [analyse native](../native-investigation.md)                                                                |
+| Structure ELF hors ligne     | Sections, segments, symboles et relocations d'origine, et protections statiques candidates                  | pwntools fourni par l'utilisateur sous Linux x64 ; [diagnostics binaires](../binary-diagnostics.md)                                       |
+| PE certificates              | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                   |
+| PE imports                   | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                             |
+| Artefact WASM                | Validation, sections, formes WAT exactes d'import/export et WAT décodé                                      | WABT 1.0.42 fourni par l'utilisateur ; `inspect_wasm_artifact`                                                                            |
+| Bytecode EVM                 | Sélecteurs de dispatch, offsets en octets, arguments inférés et mutabilité                                  | Fichier local brut ou hexadécimal sous Linux x64 ; [guide EVM hors ligne](../evm-bytecode.md)                                             |
+| Rust binaries                | Embedded cargo-auditable dependency list                                                                    | [Rust binaries](../rust-binaries.md)                                                                                                      |
+| ELF notes                    | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                              |
+| Binary hardening             | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                             |
+| Linux kernel modules         | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                    |
+| Erlang BEAM                  | IFF chunks, atoms, exports, and tables                                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                         |
+| Apple IPS crashes            | .ips metadata, threads, images, registers and crash classes                                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                             |
+| Crashs Linux enregistrés     | Notes brutes, registres et signaux de chaque thread enregistré, et correspondances de mappings facultatives | pwntools fourni par l'utilisateur sous Linux x64 ; GDB/pwndbg en option ; [crashs enregistrés](../recorded-crashes.md)                    |
+| Installations de bureau      | Environnements candidats, fichiers justificatifs, composants et étapes suivantes                            | Inspection bornée des répertoires et en-têtes；[Applications de bureau](../desktop-applications.md)                                       |
+| JavaScript / Electron        | Modules, imports, source maps, routes, IPC et relations avec les modules natifs                             | Node.js et npm ; [analyse d'applications](../javascript-application-workflows.md); Linux: procps `ps`                                     |
+| Sites web                    | Structure des pages, scripts, observations réseau et captures d'écran demandées                             | Un navigateur de la famille Chrome ; [analyse du navigateur](../browser-observation.md)                                                   |
+| Captures réseau enregistrées | Requêtes, réponses, payloads exposés et emplacements dans le code source                                    | HAR / Fiddler Everywhere SAZ ; mitmdump sous Linux pour les captures mitmproxy natives ; [guide des captures](../web-network-captures.md) |
+| Captures de paquets          | Points de terminaison, DNS, TLS SNI, distribution des protocoles et requêtes HTTP                           | tshark et capinfos fournis par l'appelant ; [guide pcap](../pcap-analysis.md)                                                             |
+| Assemblys .NET               | Métadonnées, instructions CIL, dépendances natives déclarées et comparaisons de builds                      | Inspection statique ; [guide du code managé](../managed-code-analysis.md)                                                                 |
+| PyInstaller                  | CArchive, PYZ, Python bytecode                                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                     |
+| APK Android                  | Déclarations du manifeste, classes, méthodes décompilées et références                                      | JADX headless et un JDK complet sous Linux/macOS/Windows x64 ; [guide Android](../android-analysis.md)                                    |
+| Appareils Android            | Appareils, paquets, processus, journaux, dumps, captures d'écran et transferts d'APK/fichiers               | adb fourni par l'appelant (émulateur ou appareil) ; [guide ADB](../adb-device-analysis.md)                                                |
+| Projets JEB                  | Unités de projet fournies par le moteur, condensés d'artefacts et pseudo-code de types/méthodes             | Un client JEB démarré par l'appelant servant MCP, sélectionné via REA_JEB_MCP_URL ; [guide JEB](../jeb-analysis.md)                       |
+| Ressources Android           | Manifeste décodé, tables de chaînes, langues et faits de version                                            | Lanceur Apktool fourni par l'appelant ; [guide des ressources](../apktool-resource-analysis.md)                                           |
+| Applications Flutter         | Empreinte de snapshot Dart, condensés de bibliothèques par ABI et provenance de build du moteur             | Aucune (analyse APK statique) ; [guide Flutter](../flutter-analysis.md)                                                                   |
+| Firmware                     | Régions, résultats d'extraction et passage de relais vers l'analyse native                                  | Binwalk / Unblob sous Linux ; [guide firmware](../firmware-analysis.md)                                                                   |
+| Paquets enregistrés          | Champs sélectionnés, valeurs répétées, filtres et règles de décodage                                        | Linux: TShark 4.x + prlimit; [guide des captures](../packet-captures.md)                                                                  |
+| Signaux logiques enregistrés | Annotations du décodeur, plages d’échantillons et diagnostics                                               | Linux: sigrok-cli 0.7.2 + prlimit; [guide des signaux](../signal-recordings.md)                                                           |
+| Paquets et ressources        | Inventaires de fichiers, empreintes, plists, anatomie des bundles Apple et ressources extraites             | [Guide artefacts et JavaScript](../javascript-artifact-reconstruction.md), [applications Apple](../apple-application-analysis.md)         |
+| Comportement des processus   | Sortie du terminal, interactions, code de sortie, observations du système de fichiers et comparaisons       | Linux/macOS avec un PTY natif ; [capture de processus](../process-capture.md)                                                             |
+| Binaires Go                  | Version du compilateur embarquée, modules, remplacements et paramètres de compilation                       | Inspection statique intégrée ELF/PE/thin Mach-O; Aucune installation de Go nécessaire                                                     |
+| Bases SQLite                 | Tables, colonnes, index, vues, déclencheurs et lignes sélectionnées de tables ordinaires                    | Instantané local base/WAL ; Node.js 24.x >=24.15 ou 26+ avec limites SQLite natives                                                       |
+| Objets de code GPU           | Cibles CUDA/HIP, paramètres et ressources de noyaux sélectionnés, texte PTX conservé                        | Inspection statique intégrée ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                       |
+| Fichiers de modèles          | Métadonnées GGUF / safetensors, déclarations de tenseurs et totaux dérivés                                  | Lecture des en-têtes ; empreinte complète facultative; [GGUF / safetensors](../model-artifacts.md)                                        |
+| Métadonnées IL2CPP           | Images d’assemblages Unity global-metadata.dat, noms de types/méthodes et plages d’index                    | Décodage statique des versions 24, 27, 29, 31, 39 ; sans Unity                                                                            |
+| Godot PCK                    | Inventaire et extraction d’archive, en-têtes/répertoires originaux et identités des contenus sélectionnés   | Formats statiques 2, 3, 4 ; sans Godot                                                                                                    |
+| Signatures APK               | Signataires v1/v2/v3/v3.1, empreintes de certificats, rotation des clés et cohérence interne des condensats | Inspection statique intégrée; `inspect_apk_signature`                                                                                     |
 
 L'inspection statique JavaScript et .NET lit les fichiers fournis sans exécuter l'application. La capture à l'exécution lance la cible choisie ou interagit avec elle avec vos permissions utilisateur ; chaque guide d'exécution décrit ses effets.
 
@@ -196,7 +196,7 @@ Pour inspecter les binaires natifs hors ligne, REA prend aussi en charge GNU obj
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Les formats natifs et les hôtes pris en charge varient selon le fournisseur. Consultez [la configuration de Hopper et Ghidra](../getting-started/installation.md#hopper), le [guide IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md) et [la prise en charge expérimentale de Ghidra sous Windows](../providers/windows-ghidra-p0.md). Ghidra prend aussi en charge [l'analyse DOS 16 bits](../providers/ghidra-dos.md). Pour les gros binaires, augmentez son délai de démarrage avec `REA_GHIDRA_STARTUP_TIMEOUT_MS` / `REA_HOPPER_STARTUP_TIMEOUT_MS`. Pour le choix du fournisseur, consultez le [guide CLI](../getting-started/cli.md#choose-a-provider). Vérifiez la [disponibilité dans les versions publiées](../getting-started/installation.md#released-package-and-main) pour les fonctionnalités ajoutées depuis la dernière version npm.
+Les formats natifs et les hôtes pris en charge varient selon le fournisseur. Consultez [la configuration de Hopper et Ghidra](../installation.md#hopper), le [guide IDA](../ida-provider.md), [Kuna](../kuna-provider.md) et [la prise en charge expérimentale de Ghidra sous Windows](../windows-ghidra-p0.md). Ghidra prend aussi en charge [l'analyse DOS 16 bits](../ghidra-dos.md). Pour les gros binaires, augmentez son délai de démarrage avec `REA_GHIDRA_STARTUP_TIMEOUT_MS` / `REA_HOPPER_STARTUP_TIMEOUT_MS`. Pour le choix du fournisseur, consultez le [guide CLI](../cli.md#choose-a-provider). Vérifiez la [disponibilité dans les versions publiées](../installation.md#released-package-and-main) pour les fonctionnalités ajoutées depuis la dernière version npm.
 
 ## Études de cas
 
@@ -275,28 +275,28 @@ REA exporte un environnement exécutable avec un test de base qui vérifie qu’
 <details>
 <summary><strong>Quels agents peuvent utiliser REA ?</strong></summary>
 
-Tout agent compatible avec les serveurs MCP locaux. Setup configure les [agents pris en charge](../getting-started/installation.md#supported-agents) ; les autres clients peuvent utiliser [l'enregistrement MCP manuel](../getting-started/installation.md#mcp-registry).
+Tout agent compatible avec les serveurs MCP locaux. Setup configure les [agents pris en charge](../installation.md#supported-agents) ; les autres clients peuvent utiliser [l'enregistrement MCP manuel](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>Ai-je besoin de Hopper, Ghidra, IDA ou Kuna ?</strong></summary>
 
-L'analyse native approfondie utilise l'un d'eux. L'inspection statique JavaScript et .NET fonctionne sans moteur d'analyse native. Setup peut installer Hopper après votre accord ; Ghidra, IDA et Kuna utilisent vos installations existantes. Consultez [la configuration des fournisseurs](../getting-started/installation.md#hopper).
+L'analyse native approfondie utilise l'un d'eux. L'inspection statique JavaScript et .NET fonctionne sans moteur d'analyse native. Setup peut installer Hopper après votre accord ; Ghidra, IDA et Kuna utilisent vos installations existantes. Consultez [la configuration des fournisseurs](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Dois-je lancer Hopper au préalable ?</strong></summary>
 
-REA lance Hopper lorsqu'une opération en a besoin. Sous macOS, une boîte de dialogue de premier lancement peut vous demander de choisir le mode démo ou d'activer votre licence. Consultez [Démarrage et dépannage de Hopper](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+REA lance Hopper lorsqu'une opération en a besoin. Sous macOS, une boîte de dialogue de premier lancement peut vous demander de choisir le mode démo ou d'activer votre licence. Consultez [Démarrage et dépannage de Hopper](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>Que fait l'installation du skill depuis skills.sh ?</strong></summary>
 
-Le skill fournit des instructions d'investigation à votre agent. Utilisez `npx rea-agents setup` pour enregistrer le serveur MCP de REA et installer les instructions correspondantes, puis redémarrez votre agent. Consultez [l'installation du skill seul](../getting-started/installation.md#skill-only-installation).
+Le skill fournit des instructions d'investigation à votre agent. Utilisez `npx rea-agents setup` pour enregistrer le serveur MCP de REA et installer les instructions correspondantes, puis redémarrez votre agent. Consultez [l'installation du skill seul](../installation.md#skill-only-installation).
 
 </details>
 
@@ -339,12 +339,12 @@ Si vous utilisez un agent, terminez l'[actualisation de la configuration](#mettr
 
 Commencez par les [guides pas à pas](https://rea.tools/fr/guides/) du site web. Pour les options exactes, les prérequis et les contrats de résultats :
 
-- [Installation et configuration](../getting-started/installation.md) : enregistrement des agents, configuration des fournisseurs, mises à jour et désinstallation.
-- [Vérification et dépannage](../getting-started/installation.md#check-readiness-for-your-task) : diagnostiquer un agent ou un moteur d'analyse donné.
-- [CLI et Evidence](../getting-started/cli.md) : commandes, choix du fournisseur, snapshots, import/export et codes de sortie.
-- [Contrats MCP](../reference/mcp-contracts.md) et [prompts pour agents](../getting-started/mcp-prompts.md) : résultats des outils, sessions et investigations guidées.
-- [Catalogue des outils](../reference/mcp-contracts.md#generated-catalog) : inventaire des outils, fournisseurs et commandes CLI, généré lors du build.
-- [Feuille de route](../development/roadmap.md) : travaux prévus et suivi des capacités.
+- [Installation et configuration](../installation.md) : enregistrement des agents, configuration des fournisseurs, mises à jour et désinstallation.
+- [Vérification et dépannage](../installation.md#check-readiness-for-your-task) : diagnostiquer un agent ou un moteur d'analyse donné.
+- [CLI et Evidence](../cli.md) : commandes, choix du fournisseur, snapshots, import/export et codes de sortie.
+- [Contrats MCP](../mcp-contracts.md) et [prompts pour agents](../mcp-prompts.md) : résultats des outils, sessions et investigations guidées.
+- [Catalogue des outils](../mcp-contracts.md#generated-catalog) : inventaire des outils, fournisseurs et commandes CLI, généré lors du build.
+- [Feuille de route](../roadmap.md) : travaux prévus et suivi des capacités.
 
 Signalez les vulnérabilités via [SECURITY.md](../../SECURITY.md).
 
@@ -376,7 +376,7 @@ applicable licenses.
 
 Votre aide sur REA est la bienvenue ! [Ouvrez une issue](https://github.com/morluto/rea/issues) pour signaler un bug ou proposer une fonctionnalité, ou [envoyez une pull request](https://github.com/morluto/rea/pulls) pour améliorer le code ou la documentation.
 
-Consultez [CONTRIBUTING.md](../../CONTRIBUTING.md) pour l'environnement de développement et les vérifications, la page [tests](../development/testing.md) pour les procédures de vérification, et la [carte de l'architecture](../architecture/architecture.mermaid) pour la structure du projet.
+Consultez [CONTRIBUTING.md](../../CONTRIBUTING.md) pour l'environnement de développement et les vérifications, la page [tests](../testing.md) pour les procédures de vérification, et la [carte de l'architecture](../architecture.mermaid) pour la structure du projet.
 
 ## Licence
 

docs/readme/README_id.md

@@ -10,7 +10,7 @@
 **Melihat fitur yang Anda sukai. Pahami cara kerjanya hingga ke tingkat biner.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Pilih agen yang ingin digunakan, tinjau perubahan yang diusulkan, lalu setujui perubahan tersebut. Proses penyiapan menambahkan server MCP REA dan instruksi alur kerja yang sesuai, serta membuat cadangan konfigurasi yang sudah ada. Setelah itu, mulai ulang agen Anda.
 
-Penyiapan mendukung Claude Code, Codex, Cursor, Gemini CLI, Grok Build, dan [agen lainnya](../getting-started/installation.md#supported-agents). Lihat [instalasi dan penyiapan](../getting-started/installation.md) untuk konfigurasi penyedia dan pendaftaran MCP secara manual.
+Penyiapan mendukung Claude Code, Codex, Cursor, Gemini CLI, Grok Build, dan [agen lainnya](../installation.md#supported-agents). Lihat [instalasi dan penyiapan](../installation.md) untuk konfigurasi penyedia dan pendaftaran MCP secara manual.
 
 MCP menggunakan skema input ringkas secara default. Untuk petunjuk bidang lengkap dan validasi bertingkat, atur `REA_MCP_INPUT_SCHEMA_PROFILE=full` pada pendaftaran MCP. Kedua profil mempertahankan semua alat dan validasi server kanonis yang sama; lihat panduan kontrak MCP.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Untuk analisis native, konfigurasikan penyedia terlebih dahulu. Lihat [Panduan CLI dan Bukti](../getting-started/cli.md) untuk perintah native, pemilihan penyedia, snapshot, dan pembuatan skrip.
+Untuk analisis native, konfigurasikan penyedia terlebih dahulu. Lihat [Panduan CLI dan Bukti](../cli.md) untuk perintah native, pemilihan penyedia, snapshot, dan pembuatan skrip.
 
 ### Perbarui REA
 
@@ -153,45 +153,45 @@ REA memerlukan Node.js 22.x (>=22.23.4), 24.x (>=24.22.1), atau 26+ (>=26.12.1),
 
 Alat tambahan dan dukungan sistem host bergantung pada target yang dianalisis:
 
-| Target                     | Hasil yang diberikan REA                                                                              | Persyaratan dan panduan                                                                                                                                       |
-| -------------------------- | ----------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Biner native               | Pseudocode, assembly, string, simbol, pemanggilan, dan referensi                                      | Hopper, Ghidra, IDA, atau Kuna; [analisis native](../guides/native/native-investigation.md)                                                                   |
-| Tata letak ELF offline     | Bagian, segmen, simbol/relokasi asli, dan kandidat mitigasi statis                                    | pwntools yang disediakan pemanggil pada Linux x64; [diagnostik biner](../guides/native/binary-diagnostics.md)                                                 |
-| PE certificates            | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                          | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                       |
-| PE imports                 | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                            | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                 |
-| Artefak WASM               | Validasi, bagian, bentuk WAT import/ekspor yang tepat, dan WAT yang didekode                          | WABT 1.0.42 yang disediakan pemanggil; `inspect_wasm_artifact`                                                                                                |
-| Bytecode EVM               | Selector dispatch, offset byte, argumen yang disimpulkan, dan sifat mutabilitas                       | Pembawa data raw/hex lokal di Linux x64; [panduan EVM offline](../guides/evm/evm-bytecode.md)                                                                 |
-| Rust binaries              | Embedded cargo-auditable dependency list                                                              | [Rust binaries](../rust-binaries.md)                                                                                                                          |
-| ELF notes                  | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                       | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                  |
-| Binary hardening           | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                   | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                 |
-| Apple IPS crashes          | .ips metadata, threads, images, registers and crash classes                                           | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                 |
-| Linux kernel modules       | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                           | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                        |
-| Erlang BEAM                | IFF chunks, atoms, exports, and tables                                                                | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                             |
-| Crash Linux yang direkam   | Catatan mentah, register/sinyal setiap thread yang direkam, dan kandidat pemetaan opsional            | pwntools yang disediakan pemanggil di Linux x64; GDB/pwndbg opsional; [crash yang direkam](../guides/native/recorded-crashes.md)                              |
-| Instalasi desktop          | Kandidat runtime, berkas pendukung, penanda komponen, dan langkah berikutnya                          | Pemeriksaan direktori dan header terbatas；[Aplikasi desktop](../desktop-applications.md)                                                                     |
-| JavaScript / Electron      | Modul, impor, source map, rute, IPC, dan hubungan add-on native                                       | Node.js dan npm; [analisis aplikasi](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                            |
-| Situs web                  | Struktur halaman, skrip, pengamatan jaringan, dan tangkapan layar yang diminta                        | Peramban berbasis Chrome; [analisis peramban](../guides/web/browser-observation.md)                                                                           |
-| Rekaman jaringan tersimpan | Permintaan, respons, payload yang terekspos, dan lokasi sumber                                        | HAR / Fiddler Everywhere SAZ; mitmdump di Linux untuk rekaman native mitmproxy; [panduan rekaman](../guides/web/web-network-captures.md)                      |
-| Capturan paket             | Endpoint, DNS, TLS SNI, distribusi protokol, dan permintaan HTTP                                      | tshark dan capinfos buatan pemanggil; [panduan pcap](../guides/data/pcap-analysis.md)                                                                         |
-| Assembly .NET              | Metadata, instruksi CIL, dependensi native yang dideklarasikan, dan perbandingan build                | Tidak ada (hanya analisis statis); [panduan kode terkelola](../guides/managed/managed-code-analysis.md)                                                       |
-| PyInstaller                | CArchive, PYZ, Python bytecode                                                                        | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                         |
-| APK Android                | Deklarasi manifest, kelas, metode hasil dekompilasi, dan referensi                                    | JADX mode headless dan JDK lengkap di Linux/macOS/Windows x64; [panduan Android](../guides/android/android-analysis.md)                                       |
-| Perangkat Android          | Perangkat, paket, proses, log, dump, tangkapan layar, serta transfer APK/berkas                       | adb buatan pemanggil (emulator atau perangkat); [panduan ADB](../guides/android/adb-device-analysis.md)                                                       |
-| Proyek JEB                 | Unit proyek bertenaga mesin, hash artefak, dan pseudokode tipe/metode                                 | Klien JEB yang dijalankan pemanggil dan menyajikan MCP, dipilih dengan REA_JEB_MCP_URL; [panduan JEB](../providers/jeb-analysis.md)                           |
-| Resource Android           | Manifest terdekode, tabel string, lokal, dan fakta versi                                              | Peluncur Apktool buatan pemanggil; [panduan resource](../guides/android/apktool-resource-analysis.md)                                                         |
-| Aplikasi Flutter           | Hash snapshot Dart, hash pustaka per ABI, dan asal build engine                                       | Tidak ada (parsing APK statis); [panduan Flutter](../guides/android/flutter-analysis.md)                                                                      |
-| Firmware                   | Wilayah, hasil ekstraksi, dan pengalihan ke analisis native                                           | Binwalk / Unblob di Linux; [panduan firmware](../guides/firmware/firmware-analysis.md)                                                                        |
-| Paket rekaman              | Kolom terpilih, nilai berulang, filter, dan aturan decode-as                                          | Linux: TShark 4.x + prlimit; [panduan tangkapan](../guides/data/packet-captures.md)                                                                           |
-| Sinyal logika terekam      | Anotasi dekoder, rentang sampel, dan diagnostik                                                       | Linux: sigrok-cli 0.7.2 + prlimit; [panduan sinyal](../guides/signals/signal-recordings.md)                                                                   |
-| Paket dan sumber daya      | Inventaris berkas, digest, plist, struktur paket Apple, dan sumber daya yang diekstrak                | [Panduan artefak dan JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [aplikasi Apple](../guides/apple/apple-application-analysis.md) |
-| Perilaku proses            | Keluaran terminal, interaksi, pengamatan proses keluar dan sistem berkas, serta perbandingan eksekusi | Linux/macOS dengan PTY native; [perekaman proses](../guides/runtime/process-capture.md)                                                                       |
-| Biner Go                   | Versi compiler tertanam, modul, penggantian dan pengaturan build                                      | Pemeriksaan statis bawaan ELF/PE/thin Mach-O; Tidak perlu memasang Go                                                                                         |
-| Database SQLite            | Tabel, kolom, indeks, view, trigger dan baris terpilih dari tabel biasa                               | Snapshot database/WAL lokal; Node.js 24.x >=24.15 atau 26+ dengan batas SQLite native                                                                         |
-| Objek kode GPU             | Target CUDA/HIP, parameter dan sumber daya kernel terpilih, teks PTX yang dipertahankan               | Pemeriksaan statis bawaan ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                              |
-| Berkas model               | Metadata GGUF / safetensors, deklarasi tensor dan total turunan                                       | Pemeriksaan header; hash seluruh berkas opsional; [GGUF / safetensors](../model-artifacts.md)                                                                 |
-| Metadata IL2CPP            | Citra assembly Unity global-metadata.dat, nama tipe/metode dan rentang indeks                         | Dekode statis versi 24, 27, 29, 31, 39; tanpa Unity                                                                                                           |
-| Godot PCK                  | Inventaris dan ekstraksi arsip, header/direktori asli dan identitas konten terpilih                   | Format statis 2, 3, 4; tanpa Godot                                                                                                                            |
-| Tanda tangan APK           | Penanda tangan v1/v2/v3/v3.1, sidik jari sertifikat, rotasi kunci dan konsistensi internal digest     | Pemeriksaan statis bawaan; `inspect_apk_signature`                                                                                                            |
+| Target                     | Hasil yang diberikan REA                                                                              | Persyaratan dan panduan                                                                                                        |
+| -------------------------- | ----------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------ |
+| Biner native               | Pseudocode, assembly, string, simbol, pemanggilan, dan referensi                                      | Hopper, Ghidra, IDA, atau Kuna; [analisis native](../native-investigation.md)                                                  |
+| Tata letak ELF offline     | Bagian, segmen, simbol/relokasi asli, dan kandidat mitigasi statis                                    | pwntools yang disediakan pemanggil pada Linux x64; [diagnostik biner](../binary-diagnostics.md)                                |
+| PE certificates            | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                          | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                        |
+| PE imports                 | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                            | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                  |
+| Artefak WASM               | Validasi, bagian, bentuk WAT import/ekspor yang tepat, dan WAT yang didekode                          | WABT 1.0.42 yang disediakan pemanggil; `inspect_wasm_artifact`                                                                 |
+| Bytecode EVM               | Selector dispatch, offset byte, argumen yang disimpulkan, dan sifat mutabilitas                       | Pembawa data raw/hex lokal di Linux x64; [panduan EVM offline](../evm-bytecode.md)                                             |
+| Rust binaries              | Embedded cargo-auditable dependency list                                                              | [Rust binaries](../rust-binaries.md)                                                                                           |
+| ELF notes                  | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                       | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                   |
+| Binary hardening           | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                   | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                  |
+| Apple IPS crashes          | .ips metadata, threads, images, registers and crash classes                                           | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                  |
+| Linux kernel modules       | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                           | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                         |
+| Erlang BEAM                | IFF chunks, atoms, exports, and tables                                                                | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                              |
+| Crash Linux yang direkam   | Catatan mentah, register/sinyal setiap thread yang direkam, dan kandidat pemetaan opsional            | pwntools yang disediakan pemanggil di Linux x64; GDB/pwndbg opsional; [crash yang direkam](../recorded-crashes.md)             |
+| Instalasi desktop          | Kandidat runtime, berkas pendukung, penanda komponen, dan langkah berikutnya                          | Pemeriksaan direktori dan header terbatas；[Aplikasi desktop](../desktop-applications.md)                                      |
+| JavaScript / Electron      | Modul, impor, source map, rute, IPC, dan hubungan add-on native                                       | Node.js dan npm; [analisis aplikasi](../javascript-application-workflows.md); Linux: procps `ps`                               |
+| Situs web                  | Struktur halaman, skrip, pengamatan jaringan, dan tangkapan layar yang diminta                        | Peramban berbasis Chrome; [analisis peramban](../browser-observation.md)                                                       |
+| Rekaman jaringan tersimpan | Permintaan, respons, payload yang terekspos, dan lokasi sumber                                        | HAR / Fiddler Everywhere SAZ; mitmdump di Linux untuk rekaman native mitmproxy; [panduan rekaman](../web-network-captures.md)  |
+| Capturan paket             | Endpoint, DNS, TLS SNI, distribusi protokol, dan permintaan HTTP                                      | tshark dan capinfos buatan pemanggil; [panduan pcap](../pcap-analysis.md)                                                      |
+| Assembly .NET              | Metadata, instruksi CIL, dependensi native yang dideklarasikan, dan perbandingan build                | Tidak ada (hanya analisis statis); [panduan kode terkelola](../managed-code-analysis.md)                                       |
+| PyInstaller                | CArchive, PYZ, Python bytecode                                                                        | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                          |
+| APK Android                | Deklarasi manifest, kelas, metode hasil dekompilasi, dan referensi                                    | JADX mode headless dan JDK lengkap di Linux/macOS/Windows x64; [panduan Android](../android-analysis.md)                       |
+| Perangkat Android          | Perangkat, paket, proses, log, dump, tangkapan layar, serta transfer APK/berkas                       | adb buatan pemanggil (emulator atau perangkat); [panduan ADB](../adb-device-analysis.md)                                       |
+| Proyek JEB                 | Unit proyek bertenaga mesin, hash artefak, dan pseudokode tipe/metode                                 | Klien JEB yang dijalankan pemanggil dan menyajikan MCP, dipilih dengan REA_JEB_MCP_URL; [panduan JEB](../jeb-analysis.md)      |
+| Resource Android           | Manifest terdekode, tabel string, lokal, dan fakta versi                                              | Peluncur Apktool buatan pemanggil; [panduan resource](../apktool-resource-analysis.md)                                         |
+| Aplikasi Flutter           | Hash snapshot Dart, hash pustaka per ABI, dan asal build engine                                       | Tidak ada (parsing APK statis); [panduan Flutter](../flutter-analysis.md)                                                      |
+| Firmware                   | Wilayah, hasil ekstraksi, dan pengalihan ke analisis native                                           | Binwalk / Unblob di Linux; [panduan firmware](../firmware-analysis.md)                                                         |
+| Paket rekaman              | Kolom terpilih, nilai berulang, filter, dan aturan decode-as                                          | Linux: TShark 4.x + prlimit; [panduan tangkapan](../packet-captures.md)                                                        |
+| Sinyal logika terekam      | Anotasi dekoder, rentang sampel, dan diagnostik                                                       | Linux: sigrok-cli 0.7.2 + prlimit; [panduan sinyal](../signal-recordings.md)                                                   |
+| Paket dan sumber daya      | Inventaris berkas, digest, plist, struktur paket Apple, dan sumber daya yang diekstrak                | [Panduan artefak dan JavaScript](../javascript-artifact-reconstruction.md), [aplikasi Apple](../apple-application-analysis.md) |
+| Perilaku proses            | Keluaran terminal, interaksi, pengamatan proses keluar dan sistem berkas, serta perbandingan eksekusi | Linux/macOS dengan PTY native; [perekaman proses](../process-capture.md)                                                       |
+| Biner Go                   | Versi compiler tertanam, modul, penggantian dan pengaturan build                                      | Pemeriksaan statis bawaan ELF/PE/thin Mach-O; Tidak perlu memasang Go                                                          |
+| Database SQLite            | Tabel, kolom, indeks, view, trigger dan baris terpilih dari tabel biasa                               | Snapshot database/WAL lokal; Node.js 24.x >=24.15 atau 26+ dengan batas SQLite native                                          |
+| Objek kode GPU             | Target CUDA/HIP, parameter dan sumber daya kernel terpilih, teks PTX yang dipertahankan               | Pemeriksaan statis bawaan ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                               |
+| Berkas model               | Metadata GGUF / safetensors, deklarasi tensor dan total turunan                                       | Pemeriksaan header; hash seluruh berkas opsional; [GGUF / safetensors](../model-artifacts.md)                                  |
+| Metadata IL2CPP            | Citra assembly Unity global-metadata.dat, nama tipe/metode dan rentang indeks                         | Dekode statis versi 24, 27, 29, 31, 39; tanpa Unity                                                                            |
+| Godot PCK                  | Inventaris dan ekstraksi arsip, header/direktori asli dan identitas konten terpilih                   | Format statis 2, 3, 4; tanpa Godot                                                                                             |
+| Tanda tangan APK           | Penanda tangan v1/v2/v3/v3.1, sidik jari sertifikat, rotasi kunci dan konsistensi internal digest     | Pemeriksaan statis bawaan; `inspect_apk_signature`                                                                             |
 
 Pemeriksaan JavaScript dan .NET statis membaca berkas yang disediakan tanpa menjalankan aplikasinya. Perekaman runtime menjalankan atau berinteraksi dengan target yang dipilih menggunakan izin pengguna Anda. Setiap panduan runtime menjelaskan dampaknya.
 
@@ -199,15 +199,15 @@ Untuk pemeriksaan biner native secara offline, REA juga mendukung GNU objdump da
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Format native dan dukungan sistem host berbeda-beda menurut penyedia. Lihat [penyiapan Hopper dan Ghidra](../getting-started/installation.md#hopper), [panduan IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md), dan [dukungan eksperimental Ghidra di Windows](../providers/windows-ghidra-p0.md).
+Format native dan dukungan sistem host berbeda-beda menurut penyedia. Lihat [penyiapan Hopper dan Ghidra](../installation.md#hopper), [panduan IDA](../ida-provider.md), [Kuna](../kuna-provider.md), dan [dukungan eksperimental Ghidra di Windows](../windows-ghidra-p0.md).
 
-Ghidra juga mendukung [analisis DOS 16-bit](../providers/ghidra-dos.md).
+Ghidra juga mendukung [analisis DOS 16-bit](../ghidra-dos.md).
 
 Untuk biner berukuran besar, tingkatkan batas waktu startup menggunakan `REA_GHIDRA_STARTUP_TIMEOUT_MS` / `REA_HOPPER_STARTUP_TIMEOUT_MS`.
 
-Untuk memilih penyedia, lihat [panduan CLI](../getting-started/cli.md#choose-a-provider).
+Untuk memilih penyedia, lihat [panduan CLI](../cli.md#choose-a-provider).
 
-Periksa [ketersediaan rilis](../getting-started/installation.md#released-package-and-main) untuk mengetahui fitur yang ditambahkan setelah rilis npm terbaru.
+Periksa [ketersediaan rilis](../installation.md#released-package-and-main) untuk mengetahui fitur yang ditambahkan setelah rilis npm terbaru.
 
 ## Contoh Penggunaan
 
@@ -286,7 +286,7 @@ REA mengekspor lingkungan yang dapat dijalankan dengan uji dasar untuk memeriksa
 <details>
 <summary><strong>Agen apa saja yang dapat menggunakan REA?</strong></summary>
 
-Agen apa pun yang mendukung server MCP lokal dapat menggunakan REA. Proses penyiapan mengonfigurasi [agen yang didukung](../getting-started/installation.md#supported-agents). Klien lain dapat menggunakan [pendaftaran MCP manual](../getting-started/installation.md#mcp-registry).
+Agen apa pun yang mendukung server MCP lokal dapat menggunakan REA. Proses penyiapan mengonfigurasi [agen yang didukung](../installation.md#supported-agents). Klien lain dapat menggunakan [pendaftaran MCP manual](../installation.md#mcp-registry).
 
 </details>
 
@@ -295,7 +295,7 @@ Agen apa pun yang mendukung server MCP lokal dapat menggunakan REA. Proses penyi
 
 Analisis native mendalam menggunakan salah satu dari keempatnya. Pemeriksaan JavaScript dan .NET statis dapat dilakukan tanpa mesin analisis native.
 
-Proses penyiapan dapat memasang Hopper setelah memperoleh persetujuan. Ghidra, IDA, dan Kuna menggunakan instalasi yang sudah tersedia. Lihat [penyiapan penyedia](../getting-started/installation.md#hopper).
+Proses penyiapan dapat memasang Hopper setelah memperoleh persetujuan. Ghidra, IDA, dan Kuna menggunakan instalasi yang sudah tersedia. Lihat [penyiapan penyedia](../installation.md#hopper).
 
 </details>
 
@@ -304,7 +304,7 @@ Proses penyiapan dapat memasang Hopper setelah memperoleh persetujuan. Ghidra, I
 
 REA akan menjalankan Hopper saat suatu operasi membutuhkannya. Di macOS, dialog saat pertama kali dijalankan mungkin meminta Anda memilih mode demo atau mengaktifkan lisensi.
 
-Lihat [startup dan pemecahan masalah Hopper](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+Lihat [startup dan pemecahan masalah Hopper](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
@@ -313,7 +313,7 @@ Lihat [startup dan pemecahan masalah Hopper](../getting-started/installation.md#
 
 Skill tersebut menyediakan instruksi investigasi untuk agen Anda. Gunakan `npx rea-agents setup` untuk mendaftarkan server MCP REA dan memasang instruksi yang sesuai, lalu mulai ulang agen Anda.
 
-Lihat [instalasi khusus skill](../getting-started/installation.md#skill-only-installation).
+Lihat [instalasi khusus skill](../installation.md#skill-only-installation).
 
 </details>
 
@@ -360,12 +360,12 @@ Mulailah dengan [panduan praktik di situs web](https://rea.tools/id/guides/).
 
 Untuk mengetahui opsi, prasyarat, dan kontrak hasil secara tepat:
 
-- [Instalasi dan penyiapan](../getting-started/installation.md): pendaftaran agen, konfigurasi penyedia, pembaruan, dan penghapusan instalasi.
-- [Kesiapan dan pemecahan masalah](../getting-started/installation.md#check-readiness-for-your-task): mendiagnosis satu agen atau mesin analisis.
-- [CLI dan Bukti](../getting-started/cli.md): perintah, pemilihan penyedia, snapshot, impor/ekspor, dan status keluar.
-- [Kontrak MCP](../reference/mcp-contracts.md) dan [prompt agen](../getting-started/mcp-prompts.md): hasil alat, sesi, dan investigasi terpandu.
-- [Katalog alat](../reference/mcp-contracts.md#generated-catalog): inventaris alat, penyedia, dan perintah CLI yang dibuat secara otomatis.
-- [Peta jalan](../development/roadmap.md): pekerjaan yang direncanakan dan pelacak kemampuan.
+- [Instalasi dan penyiapan](../installation.md): pendaftaran agen, konfigurasi penyedia, pembaruan, dan penghapusan instalasi.
+- [Kesiapan dan pemecahan masalah](../installation.md#check-readiness-for-your-task): mendiagnosis satu agen atau mesin analisis.
+- [CLI dan Bukti](../cli.md): perintah, pemilihan penyedia, snapshot, impor/ekspor, dan status keluar.
+- [Kontrak MCP](../mcp-contracts.md) dan [prompt agen](../mcp-prompts.md): hasil alat, sesi, dan investigasi terpandu.
+- [Katalog alat](../mcp-contracts.md#generated-catalog): inventaris alat, penyedia, dan perintah CLI yang dibuat secara otomatis.
+- [Peta jalan](../roadmap.md): pekerjaan yang direncanakan dan pelacak kemampuan.
 
 Laporkan kerentanan melalui [SECURITY.md](../../SECURITY.md).
 
@@ -397,7 +397,7 @@ applicable licenses.
 
 Kami sangat menghargai bantuan Anda untuk REA! [Buat issue](https://github.com/morluto/rea/issues) untuk melaporkan bug atau menyarankan fitur, atau [kirim pull request](https://github.com/morluto/rea/pulls) untuk meningkatkan kode atau dokumentasi.
 
-Lihat [CONTRIBUTING.md](../../CONTRIBUTING.md) untuk penyiapan pengembangan dan pemeriksaan, [pengujian](../development/testing.md) untuk tahapan verifikasi, serta [peta arsitektur](../architecture/architecture.mermaid) untuk struktur proyek.
+Lihat [CONTRIBUTING.md](../../CONTRIBUTING.md) untuk penyiapan pengembangan dan pemeriksaan, [pengujian](../testing.md) untuk tahapan verifikasi, serta [peta arsitektur](../architecture.mermaid) untuk struktur proyek.
 
 ## Lisensi
 

docs/readme/README_it.md

@@ -10,7 +10,7 @@
 **Vedi una funzionalità che ti piace. Capisci come funziona, fino al livello binario.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#cosa-puoi-analizzare)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Scegli i tuoi agenti, rivedi le modifiche proposte e approvale. La configurazione aggiunge il server MCP di REA e le istruzioni di workflow corrispondenti, con backup della configurazione esistente. Riavvia quindi il tuo agente.
 
-La configurazione supporta Claude Code, Codex, Cursor, Gemini CLI, Grok Build e [altri agenti](../getting-started/installation.md#supported-agents). Vedi [installazione e configurazione](../getting-started/installation.md) per la configurazione dei provider e la registrazione manuale MCP.
+La configurazione supporta Claude Code, Codex, Cursor, Gemini CLI, Grok Build e [altri agenti](../installation.md#supported-agents). Vedi [installazione e configurazione](../installation.md) per la configurazione dei provider e la registrazione manuale MCP.
 
 MCP usa schemi di input compatti per impostazione predefinita. Per tutte le indicazioni sui campi e la validazione annidata, imposta `REA_MCP_INPUT_SCHEMA_PROFILE=full` nella registrazione MCP. Entrambi i profili mantengono tutti gli strumenti e la stessa validazione canonica del server; vedi la guida ai contratti MCP.
 
@@ -110,7 +110,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Per l'analisi nativa, configura prima un provider. Vedi la [guida CLI ed Evidence](../getting-started/cli.md) per i comandi nativi, la selezione del provider, gli snapshot e lo scripting.
+Per l'analisi nativa, configura prima un provider. Vedi la [guida CLI ed Evidence](../cli.md) per i comandi nativi, la selezione del provider, gli snapshot e lo scripting.
 
 ### Aggiorna REA
 
@@ -150,45 +150,45 @@ Il tuo agente chiama REA tramite MCP per ispezionare il bersaglio e tracciare il
 
 REA richiede Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) o 26+ (>=26.12.1), oltre a npm. Strumenti aggiuntivi e supporto host dipendono dal bersaglio:
 
-| Obiettivo                    | Cosa restituisce REA                                                                                    | Requisiti e guida                                                                                                                                              |
-| ---------------------------- | ------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Binari nativi                | Pseudocodice, assembly, stringhe, simboli, chiamate e riferimenti                                       | Hopper, Ghidra, IDA o Kuna; [analisi nativa](../guides/native/native-investigation.md)                                                                         |
-| Layout ELF offline           | Sezioni, segmenti, simboli/relocazioni originali e candidati mitigazioni statiche                       | pwntools fornito dal chiamante su Linux x64; [diagnostica binaria](../guides/native/binary-diagnostics.md)                                                     |
-| PE certificates              | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                            | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                        |
-| PE imports                   | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                              | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                  |
-| Artefatto WASM               | Convalida, sezioni, forme WAT di import/export esatte e WAT decodificato                                | WABT 1.0.42 fornito dal chiamante; `inspect_wasm_artifact`                                                                                                     |
-| Bytecode EVM                 | Selettori di dispatch, offset dei byte, argomenti inferiti e mutabilità                                 | Carrier raw/hex locale su Linux x64; [guida EVM offline](../guides/evm/evm-bytecode.md)                                                                        |
-| Rust binaries                | Embedded cargo-auditable dependency list                                                                | [Rust binaries](../rust-binaries.md)                                                                                                                           |
-| ELF notes                    | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                         | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                   |
-| Binary hardening             | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                     | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                  |
-| Linux kernel modules         | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                             | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                         |
-| Erlang BEAM                  | IFF chunks, atoms, exports, and tables                                                                  | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                              |
-| Apple IPS crashes            | .ips metadata, threads, images, registers and crash classes                                             | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                  |
-| Crash Linux registrati       | Note grezze, registri/segnai di ogni thread registrato e candidati mapping opzionali                    | pwntools fornito dal chiamante su Linux x64; GDB/pwndbg opzionale; [crash registrati](../guides/native/recorded-crashes.md)                                    |
-| Installazioni desktop        | Runtime candidati, file di supporto, componenti e passi successivi                                      | Ispezione limitata di directory e intestazioni；[Applicazioni desktop](../desktop-applications.md)                                                             |
-| JavaScript / Electron        | Moduli, import, source map, route, IPC e relazioni con add-on nativi                                    | Node.js e npm; [analisi delle applicazioni](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                      |
-| Siti web                     | Struttura della pagina, script, osservazioni di rete e screenshot richiesti                             | Un browser della famiglia Chrome; [analisi browser](../guides/web/browser-observation.md)                                                                      |
-| Acquisizioni di rete salvate | Richieste, risposte, payload esposti e posizioni sorgente                                               | HAR / Fiddler Everywhere SAZ; mitmdump su Linux per acquisizioni mitmproxy native; [guida alle acquisizioni](../guides/web/web-network-captures.md)            |
-| Captured di pacchetti        | Endpoint, DNS, TLS SNI, distribuzione dei protocolli e richieste HTTP                                   | tshark e capinfos forniti dal chiamante; [guida pcap](../guides/data/pcap-analysis.md)                                                                         |
-| Assembly .NET                | Metadati, istruzioni CIL, dipendenze native dichiarate e confronti di build                             | Nessuno (solo statico); [guida managed-code](../guides/managed/managed-code-analysis.md)                                                                       |
-| PyInstaller                  | CArchive, PYZ, Python bytecode                                                                          | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                          |
-| APK Android                  | Dichiarazioni manifest, classi, metodi decompilati e riferimenti                                        | JADX headless e un JDK completo su Linux/macOS/Windows x64; [guida Android](../guides/android/android-analysis.md)                                             |
-| Dispositivi Android          | Dispositivi, pacchetti, processi, log, dump, screenshot e trasferimenti APK/file                        | adb fornito dal chiamante (emulatore o hardware); [guida ADB](../guides/android/adb-device-analysis.md)                                                        |
-| Progetti JEB                 | Unità di progetto dal motore, digest degli artifact e pseudocodice di tipi/metodi                       | Client JEB avviato dal chiamante via MCP, selezionato con REA_JEB_MCP_URL; [guida JEB](../providers/jeb-analysis.md)                                           |
-| Risorse Android              | Manifest decodificato, tabelle stringhe, lingue e dati di versione                                      | Launcher Apktool fornito dal chiamante; [guida alle risorse](../guides/android/apktool-resource-analysis.md)                                                   |
-| App Flutter                  | Hash dello snapshot Dart, digest delle librerie per ABI e provenienza della build del motore            | Nessuno (analisi APK statica); [guida Flutter](../guides/android/flutter-analysis.md)                                                                          |
-| Firmware                     | Regioni, risultati di estrazione e passaggi all'analisi nativa                                          | Binwalk / Unblob su Linux; [guida firmware](../guides/firmware/firmware-analysis.md)                                                                           |
-| Pacchetti registrati         | Campi selezionati, valori ripetuti, filtri e regole di decodifica                                       | Linux: TShark 4.x + prlimit; [guida alle catture](../guides/data/packet-captures.md)                                                                           |
-| Segnali logici registrati    | Annotazioni del decoder, intervalli di campioni e diagnostica                                           | Linux: sigrok-cli 0.7.2 + prlimit; [guida ai segnali](../guides/signals/signal-recordings.md)                                                                  |
-| Pacchetti e risorse          | Inventari file, digest, plist, anatomia dei bundle Apple e risorse estratte                             | [Guida artifact e JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [Applicazioni Apple](../guides/apple/apple-application-analysis.md) |
-| Comportamento dei processi   | Output del terminale, interazioni, osservazioni su uscita e filesystem ed confronti di esecuzione       | Linux/macOS con un PTY nativo; [cattura dei processi](../guides/runtime/process-capture.md)                                                                    |
-| Binari Go                    | Versione del compilatore incorporata, moduli, sostituzioni e impostazioni di compilazione               | Ispezione statica integrata ELF/PE/thin Mach-O; Nessuna installazione di Go richiesta                                                                          |
-| Database SQLite              | Tabelle, colonne, indici, viste, trigger e righe selezionate di tabelle ordinarie                       | Snapshot locale database/WAL; Node.js 24.x >=24.15 o 26+ con limiti SQLite nativi                                                                              |
-| Oggetti codice GPU           | Target CUDA/HIP, parametri e risorse dei kernel selezionati, testo PTX conservato                       | Ispezione statica integrata ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                             |
-| File di modelli              | Metadati GGUF / safetensors, dichiarazioni dei tensori e totali derivati                                | Ispezione degli header; hash completo facoltativo; [GGUF / safetensors](../model-artifacts.md)                                                                 |
-| Metadati IL2CPP              | Immagini assembly Unity global-metadata.dat, nomi di tipi/metodi e intervalli di indici                 | Decodifica statica delle versioni 24, 27, 29, 31, 39; senza Unity                                                                                              |
-| Godot PCK                    | Inventario ed estrazione, header/directory originali e identità dei contenuti selezionati               | Formati statici 2, 3, 4; senza Godot                                                                                                                           |
-| Firme APK                    | Firmatari v1/v2/v3/v3.1, impronte dei certificati, rotazione delle chiavi e coerenza interna dei digest | Ispezione statica integrata; `inspect_apk_signature`                                                                                                           |
+| Obiettivo                    | Cosa restituisce REA                                                                                    | Requisiti e guida                                                                                                                        |
+| ---------------------------- | ------------------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------- |
+| Binari nativi                | Pseudocodice, assembly, stringhe, simboli, chiamate e riferimenti                                       | Hopper, Ghidra, IDA o Kuna; [analisi nativa](../native-investigation.md)                                                                 |
+| Layout ELF offline           | Sezioni, segmenti, simboli/relocazioni originali e candidati mitigazioni statiche                       | pwntools fornito dal chiamante su Linux x64; [diagnostica binaria](../binary-diagnostics.md)                                             |
+| PE certificates              | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                            | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                  |
+| PE imports                   | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                              | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                            |
+| Artefatto WASM               | Convalida, sezioni, forme WAT di import/export esatte e WAT decodificato                                | WABT 1.0.42 fornito dal chiamante; `inspect_wasm_artifact`                                                                               |
+| Bytecode EVM                 | Selettori di dispatch, offset dei byte, argomenti inferiti e mutabilità                                 | Carrier raw/hex locale su Linux x64; [guida EVM offline](../evm-bytecode.md)                                                             |
+| Rust binaries                | Embedded cargo-auditable dependency list                                                                | [Rust binaries](../rust-binaries.md)                                                                                                     |
+| ELF notes                    | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                         | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                             |
+| Binary hardening             | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                     | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                            |
+| Linux kernel modules         | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                             | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                   |
+| Erlang BEAM                  | IFF chunks, atoms, exports, and tables                                                                  | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                        |
+| Apple IPS crashes            | .ips metadata, threads, images, registers and crash classes                                             | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                            |
+| Crash Linux registrati       | Note grezze, registri/segnai di ogni thread registrato e candidati mapping opzionali                    | pwntools fornito dal chiamante su Linux x64; GDB/pwndbg opzionale; [crash registrati](../recorded-crashes.md)                            |
+| Installazioni desktop        | Runtime candidati, file di supporto, componenti e passi successivi                                      | Ispezione limitata di directory e intestazioni；[Applicazioni desktop](../desktop-applications.md)                                       |
+| JavaScript / Electron        | Moduli, import, source map, route, IPC e relazioni con add-on nativi                                    | Node.js e npm; [analisi delle applicazioni](../javascript-application-workflows.md); Linux: procps `ps`                                  |
+| Siti web                     | Struttura della pagina, script, osservazioni di rete e screenshot richiesti                             | Un browser della famiglia Chrome; [analisi browser](../browser-observation.md)                                                           |
+| Acquisizioni di rete salvate | Richieste, risposte, payload esposti e posizioni sorgente                                               | HAR / Fiddler Everywhere SAZ; mitmdump su Linux per acquisizioni mitmproxy native; [guida alle acquisizioni](../web-network-captures.md) |
+| Captured di pacchetti        | Endpoint, DNS, TLS SNI, distribuzione dei protocolli e richieste HTTP                                   | tshark e capinfos forniti dal chiamante; [guida pcap](../pcap-analysis.md)                                                               |
+| Assembly .NET                | Metadati, istruzioni CIL, dipendenze native dichiarate e confronti di build                             | Nessuno (solo statico); [guida managed-code](../managed-code-analysis.md)                                                                |
+| PyInstaller                  | CArchive, PYZ, Python bytecode                                                                          | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                    |
+| APK Android                  | Dichiarazioni manifest, classi, metodi decompilati e riferimenti                                        | JADX headless e un JDK completo su Linux/macOS/Windows x64; [guida Android](../android-analysis.md)                                      |
+| Dispositivi Android          | Dispositivi, pacchetti, processi, log, dump, screenshot e trasferimenti APK/file                        | adb fornito dal chiamante (emulatore o hardware); [guida ADB](../adb-device-analysis.md)                                                 |
+| Progetti JEB                 | Unità di progetto dal motore, digest degli artifact e pseudocodice di tipi/metodi                       | Client JEB avviato dal chiamante via MCP, selezionato con REA_JEB_MCP_URL; [guida JEB](../jeb-analysis.md)                               |
+| Risorse Android              | Manifest decodificato, tabelle stringhe, lingue e dati di versione                                      | Launcher Apktool fornito dal chiamante; [guida alle risorse](../apktool-resource-analysis.md)                                            |
+| App Flutter                  | Hash dello snapshot Dart, digest delle librerie per ABI e provenienza della build del motore            | Nessuno (analisi APK statica); [guida Flutter](../flutter-analysis.md)                                                                   |
+| Firmware                     | Regioni, risultati di estrazione e passaggi all'analisi nativa                                          | Binwalk / Unblob su Linux; [guida firmware](../firmware-analysis.md)                                                                     |
+| Pacchetti registrati         | Campi selezionati, valori ripetuti, filtri e regole di decodifica                                       | Linux: TShark 4.x + prlimit; [guida alle catture](../packet-captures.md)                                                                 |
+| Segnali logici registrati    | Annotazioni del decoder, intervalli di campioni e diagnostica                                           | Linux: sigrok-cli 0.7.2 + prlimit; [guida ai segnali](../signal-recordings.md)                                                           |
+| Pacchetti e risorse          | Inventari file, digest, plist, anatomia dei bundle Apple e risorse estratte                             | [Guida artifact e JavaScript](../javascript-artifact-reconstruction.md), [Applicazioni Apple](../apple-application-analysis.md)          |
+| Comportamento dei processi   | Output del terminale, interazioni, osservazioni su uscita e filesystem ed confronti di esecuzione       | Linux/macOS con un PTY nativo; [cattura dei processi](../process-capture.md)                                                             |
+| Binari Go                    | Versione del compilatore incorporata, moduli, sostituzioni e impostazioni di compilazione               | Ispezione statica integrata ELF/PE/thin Mach-O; Nessuna installazione di Go richiesta                                                    |
+| Database SQLite              | Tabelle, colonne, indici, viste, trigger e righe selezionate di tabelle ordinarie                       | Snapshot locale database/WAL; Node.js 24.x >=24.15 o 26+ con limiti SQLite nativi                                                        |
+| Oggetti codice GPU           | Target CUDA/HIP, parametri e risorse dei kernel selezionati, testo PTX conservato                       | Ispezione statica integrata ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                       |
+| File di modelli              | Metadati GGUF / safetensors, dichiarazioni dei tensori e totali derivati                                | Ispezione degli header; hash completo facoltativo; [GGUF / safetensors](../model-artifacts.md)                                           |
+| Metadati IL2CPP              | Immagini assembly Unity global-metadata.dat, nomi di tipi/metodi e intervalli di indici                 | Decodifica statica delle versioni 24, 27, 29, 31, 39; senza Unity                                                                        |
+| Godot PCK                    | Inventario ed estrazione, header/directory originali e identità dei contenuti selezionati               | Formati statici 2, 3, 4; senza Godot                                                                                                     |
+| Firme APK                    | Firmatari v1/v2/v3/v3.1, impronte dei certificati, rotazione delle chiavi e coerenza interna dei digest | Ispezione statica integrata; `inspect_apk_signature`                                                                                     |
 
 L'ispezione statica di JavaScript e .NET legge i file forniti senza eseguire l'applicazione. La cattura a runtime esegue o interagisce con il bersaglio selezionato usando i tuoi permessi utente; ogni guida runtime descrive i suoi effetti.
 
@@ -196,7 +196,7 @@ Per ispezionare offline i binari nativi, REA supporta anche GNU objdump e Rizin,
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-I formati nativi e il supporto host variano in base al provider. Vedi la [configurazione di Hopper e Ghidra](../getting-started/installation.md#hopper), la [guida IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md) e il [supporto sperimentale Windows Ghidra](../providers/windows-ghidra-p0.md). Ghidra supporta anche l'[analisi DOS a 16 bit](../providers/ghidra-dos.md). Per binari di grandi dimensioni, aumenta il timeout di avvio con `REA_GHIDRA_STARTUP_TIMEOUT_MS` / `REA_HOPPER_STARTUP_TIMEOUT_MS`. Per la selezione del provider, vedi la [guida CLI](../getting-started/cli.md#choose-a-provider). Controlla la [disponibilità delle release](../getting-started/installation.md#released-package-and-main) per le funzionalità aggiunte dall'ultima release npm.
+I formati nativi e il supporto host variano in base al provider. Vedi la [configurazione di Hopper e Ghidra](../installation.md#hopper), la [guida IDA](../ida-provider.md), [Kuna](../kuna-provider.md) e il [supporto sperimentale Windows Ghidra](../windows-ghidra-p0.md). Ghidra supporta anche l'[analisi DOS a 16 bit](../ghidra-dos.md). Per binari di grandi dimensioni, aumenta il timeout di avvio con `REA_GHIDRA_STARTUP_TIMEOUT_MS` / `REA_HOPPER_STARTUP_TIMEOUT_MS`. Per la selezione del provider, vedi la [guida CLI](../cli.md#choose-a-provider). Controlla la [disponibilità delle release](../installation.md#released-package-and-main) per le funzionalità aggiunte dall'ultima release npm.
 
 ## Showcase
 
@@ -275,28 +275,28 @@ REA esporta un ambiente eseguibile con un test di base che ne verifica l’avvio
 <details>
 <summary><strong>Quali agenti possono usare REA?</strong></summary>
 
-Qualsiasi agente che supporti server MCP locali. La configurazione configura gli [agenti supportati](../getting-started/installation.md#supported-agents); altri client possono usare la [registrazione MCP manuale](../getting-started/installation.md#mcp-registry).
+Qualsiasi agente che supporti server MCP locali. La configurazione configura gli [agenti supportati](../installation.md#supported-agents); altri client possono usare la [registrazione MCP manuale](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>Ho bisogno di Hopper, Ghidra, IDA o Kuna?</strong></summary>
 
-L'analisi nativa profonda ne usa uno. L'ispezione statica di JavaScript e .NET funziona senza un motore di analisi nativo. La configurazione può installare Hopper previa approvazione; Ghidra, IDA e Kuna usano le tue installazioni esistenti. Vedi [configurazione provider](../getting-started/installation.md#hopper).
+L'analisi nativa profonda ne usa uno. L'ispezione statica di JavaScript e .NET funziona senza un motore di analisi nativo. La configurazione può installare Hopper previa approvazione; Ghidra, IDA e Kuna usano le tue installazioni esistenti. Vedi [configurazione provider](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Devo avviare Hopper per primo?</strong></summary>
 
-REA avvia Hopper quando un'operazione ne ha bisogno. Su macOS, una finestra di dialogo al primo avvio potrebbe chiederti di scegliere la modalità demo o di attivare la licenza. Vedi [avvio di Hopper e risoluzione dei problemi](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+REA avvia Hopper quando un'operazione ne ha bisogno. Su macOS, una finestra di dialogo al primo avvio potrebbe chiederti di scegliere la modalità demo o di attivare la licenza. Vedi [avvio di Hopper e risoluzione dei problemi](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>Cosa fa l'installazione dello skill da skills.sh?</strong></summary>
 
-Lo skill fornisce istruzioni di indagine per il tuo agente. Usa `npx rea-agents setup` per registrare il server MCP di REA e installare le istruzioni corrispondenti, quindi riavvia il tuo agente. Vedi [installazione solo skill](../getting-started/installation.md#skill-only-installation).
+Lo skill fornisce istruzioni di indagine per il tuo agente. Usa `npx rea-agents setup` per registrare il server MCP di REA e installare le istruzioni corrispondenti, quindi riavvia il tuo agente. Vedi [installazione solo skill](../installation.md#skill-only-installation).
 
 </details>
 
@@ -339,12 +339,12 @@ Se stai usando un agente, completa l'[aggiornamento della configurazione](#aggio
 
 Inizia dalle [guide pratiche](https://rea.tools/it/guides/) del sito web. Per opzioni esatte, prerequisiti e contratti dei risultati:
 
-- [Installazione e configurazione](../getting-started/installation.md): registrazione agente, configurazione provider, aggiornamenti e disinstallazione.
-- [Pronto all'uso e risoluzione dei problemi](../getting-started/installation.md#check-readiness-for-your-task): diagnostica un agente o un motore di analisi.
-- [CLI ed Evidence](../getting-started/cli.md): comandi, selezione provider, snapshot, import/export e stati di uscita.
-- [Contratti MCP](../reference/mcp-contracts.md) e [prompt agente](../getting-started/mcp-prompts.md): risultati degli strumenti, sessioni e indagini guidate.
-- [Catalogo strumenti](../reference/mcp-contracts.md#generated-catalog): inventario generato di strumenti, provider e comandi CLI.
-- [Roadmap](../development/roadmap.md): lavoro pianificato e tracker delle capacità.
+- [Installazione e configurazione](../installation.md): registrazione agente, configurazione provider, aggiornamenti e disinstallazione.
+- [Pronto all'uso e risoluzione dei problemi](../installation.md#check-readiness-for-your-task): diagnostica un agente o un motore di analisi.
+- [CLI ed Evidence](../cli.md): comandi, selezione provider, snapshot, import/export e stati di uscita.
+- [Contratti MCP](../mcp-contracts.md) e [prompt agente](../mcp-prompts.md): risultati degli strumenti, sessioni e indagini guidate.
+- [Catalogo strumenti](../mcp-contracts.md#generated-catalog): inventario generato di strumenti, provider e comandi CLI.
+- [Roadmap](../roadmap.md): lavoro pianificato e tracker delle capacità.
 
 Segnala vulnerabilità tramite [SECURITY.md](../../SECURITY.md).
 
@@ -376,7 +376,7 @@ applicable licenses.
 
 Apprezzeremmo il tuo aiuto con REA! [Apri un issue](https://github.com/morluto/rea/issues) per segnalare un bug o suggerire una funzionalità, oppure [invia una pull request](https://github.com/morluto/rea/pulls) per migliorare il codice o la documentazione.
 
-Vedi [CONTRIBUTING.md](../../CONTRIBUTING.md) per la configurazione di sviluppo e i controlli, [testing](../development/testing.md) per le lane di verifica e la [mappa dell'architettura](../architecture/architecture.mermaid) per la struttura del progetto.
+Vedi [CONTRIBUTING.md](../../CONTRIBUTING.md) per la configurazione di sviluppo e i controlli, [testing](../testing.md) per le lane di verifica e la [mappa dell'architettura](../architecture.mermaid) per la struttura del progetto.
 
 ## License
 

docs/readme/README_ja.md

@@ -10,7 +10,7 @@
 **気に入った機能を見つけたら、その仕組みをバイナリのレベルまで理解する。**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 使うエージェントを選び、予定されている変更を確認して承認してください。セットアップは REA の MCP サーバーと対応するワークフローの手順を追加し、既存の設定をバックアップします。完了後にエージェントを再起動してください。
 
-セットアップは Claude Code、Codex、Cursor、Gemini CLI、Grok Build、および[その他のエージェント](../getting-started/installation.md#supported-agents)に対応しています。プロバイダーの設定と MCP の手動登録については、[インストールとセットアップ](../getting-started/installation.md)を参照してください。
+セットアップは Claude Code、Codex、Cursor、Gemini CLI、Grok Build、および[その他のエージェント](../installation.md#supported-agents)に対応しています。プロバイダーの設定と MCP の手動登録については、[インストールとセットアップ](../installation.md)を参照してください。
 
 MCP は既定でコンパクトな入力スキーマを使用します。完全なフィールド説明と入れ子の検証情報が必要な場合は、MCP 登録に `REA_MCP_INPUT_SCHEMA_PROFILE=full` を設定してください。どちらも全ツールと同じ正規サーバー検証を維持します。詳細は MCP 契約ガイドを参照してください。
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-ネイティブ分析には、先にプロバイダーの設定が必要です。ネイティブ分析のコマンド、プロバイダーの選択、スナップショット、スクリプトでの利用は、[CLI と Evidence のガイド](../getting-started/cli.md)を参照してください。
+ネイティブ分析には、先にプロバイダーの設定が必要です。ネイティブ分析のコマンド、プロバイダーの選択、スナップショット、スクリプトでの利用は、[CLI と Evidence のガイド](../cli.md)を参照してください。
 
 ### REA を更新する
 
@@ -151,45 +151,45 @@ Bun では `npx rea-agents@latest` の代わりに `bunx rea-agents@latest` を
 
 REA には Node.js 22.x（>=22.23.4）、24.x（>=24.22.1）、または 26+ (>=26.12.1) と npm が必要です。追加のツールや対応ホストは、対象によって異なります。
 
-| 対象                             | REA が返すもの                                                                              | 要件とガイド                                                                                                                                                                  |
-| -------------------------------- | ------------------------------------------------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| ネイティブバイナリ               | 疑似コード、アセンブリ、文字列、シンボル、呼び出し、参照                                    | Hopper、Ghidra、IDA、または Kuna；[ネイティブ分析](../guides/native/native-investigation.md)                                                                                  |
-| オフライン ELF レイアウト        | セクション、セグメント、元のシンボル／再配置情報、静的解析によるセキュリティ対策の候補      | Linux x64 で利用者が用意する pwntools；[バイナリ診断](../guides/native/binary-diagnostics.md)                                                                                 |
-| PE certificates                  | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                                       |
-| PE imports                       | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                                 |
-| EVM バイトコード                 | ディスパッチセレクター、バイトオフセット、推定された引数と状態変更の可否                    | Linux x64 上のローカルの生バイト／16 進数の入力ファイル；[オフライン EVM ガイド](../guides/evm/evm-bytecode.md)                                                               |
-| Rust binaries                    | Embedded cargo-auditable dependency list                                                    | [Rust binaries](../rust-binaries.md)                                                                                                                                          |
-| ELF notes                        | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                                  |
-| Binary hardening                 | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                                 |
-| Apple IPS crashes                | .ips metadata, threads, images, registers and crash classes                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                                 |
-| Linux kernel modules             | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                                        |
-| Erlang BEAM                      | IFF chunks, atoms, exports, and tables                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                             |
-| 記録済みの Linux クラッシュ      | 生の note レコード、記録された全スレッドのレジスター／シグナル、任意のマッピング候補        | Linux x64 で利用者が用意する pwntools；GDB/pwndbg は任意；[記録済みクラッシュ](../guides/native/recorded-crashes.md)                                                          |
-| デスクトップのインストール先     | ランタイム候補、根拠ファイル、コンポーネントの目印、次の調査手順                            | 上限付きのディレクトリ・ヘッダー検査；[デスクトップアプリ](../desktop-applications.md)                                                                                        |
-| JavaScript / Electron            | モジュール、インポート、ソースマップ、ルート、IPC、ネイティブアドオンの関係                 | Node.js と npm；[アプリケーション分析](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                                          |
-| ウェブサイト                     | ページ構造、スクリプト、ネットワークの観測結果、依頼されたスクリーンショット                | Chrome 系ブラウザー；[ブラウザー分析](../guides/web/browser-observation.md)                                                                                                   |
-| 保存済みのネットワークキャプチャ | リクエスト、レスポンス、取得可能なペイロード、ソース内の位置                                | HAR / Fiddler Everywhere SAZ；mitmproxy ネイティブ形式のキャプチャには Linux 上の mitmdump；[キャプチャガイド](../guides/web/web-network-captures.md)                         |
-| パケットキャプチャ               | エンドポイント、DNS、TLS SNI、プロトコル分布、HTTPリクエスト                                | 呼び出し側が用意した tshark と capinfos；[pcapガイド](../guides/data/pcap-analysis.md)                                                                                        |
-| .NET アセンブリ                  | メタデータ、CIL 命令、宣言されたネイティブ依存関係、ビルドの比較                            | 静的な検査；[マネージドコードのガイド](../guides/managed/managed-code-analysis.md)                                                                                            |
-| PyInstaller                      | CArchive, PYZ, Python bytecode                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                                         |
-| Android APK                      | マニフェストの宣言、クラス、逆コンパイルされたメソッド、参照                                | Linux/macOS/Windows x64 上のヘッドレス JADX と完全な JDK；[Android ガイド](../guides/android/android-analysis.md)                                                             |
-| Android デバイス                 | デバイス、パッケージ、プロセス、ログ、ダンプ、スクリーンキャプチャ、APK/ファイル転送        | 呼び出し側が用意した adb（エミュレーターまたは実機）；[ADB ガイド](../guides/android/adb-device-analysis.md)                                                                  |
-| JEBプロジェクト                  | エンジンによるプロジェクトユニット、アーティファクトのダイジェスト、型/メソッドの擬似コード | 呼び出し側が起動し MCP を提供する JEB クライアント（REA_JEB_MCP_URL で選択）；[JEB ガイド](../providers/jeb-analysis.md)                                                      |
-| Android リソース                 | デコードされたマニフェスト、文字列テーブル、ロケール、バージョン情報                        | 呼び出し側が用意した Apktool ランチャー；[リソースガイド](../guides/android/apktool-resource-analysis.md)                                                                     |
-| Flutter アプリ                   | Dart スナップショットハッシュ、ABI ごとのライブラリダイジェスト、エンジンビルドの来歴       | 不要（静的 APK 解析）；[Flutter ガイド](../guides/android/flutter-analysis.md)                                                                                                |
-| ファームウェア                   | 領域、抽出結果、ネイティブ分析への引き継ぎ                                                  | Linux 上の Binwalk / Unblob；[ファームウェアガイド](../guides/firmware/firmware-analysis.md)                                                                                  |
-| 記録済みパケット                 | 選択フィールド、繰り返し値、フィルター、デコード指定                                        | Linux: TShark 4.x + prlimit; [キャプチャガイド](../guides/data/packet-captures.md)                                                                                            |
-| 記録済みロジック信号             | デコーダ注釈、サンプル範囲、診断情報                                                        | Linux: sigrok-cli 0.7.2 + prlimit; [信号記録ガイド](../guides/signals/signal-recordings.md)                                                                                   |
-| パッケージとリソース             | ファイル一覧、ダイジェスト、plist、Apple バンドルの構造、抽出されたリソース                 | [アーティファクトと JavaScript のガイド](../guides/javascript/javascript-artifact-reconstruction.md)、[Apple アプリケーション](../guides/apple/apple-application-analysis.md) |
-| プロセスの動作                   | ターミナル出力、対話、終了とファイルシステムの観測結果、実行の比較                          | ネイティブ PTY を備えた Linux/macOS；[プロセスキャプチャ](../guides/runtime/process-capture.md)                                                                               |
-| Go バイナリ                      | 埋め込みコンパイラバージョン、モジュール、置換、ビルド設定                                  | 組み込みの静的解析 ELF/PE/thin Mach-O; Go のインストールは不要                                                                                                                |
-| SQLite データベース              | テーブル、列、インデックス、ビュー、トリガー、選択した通常テーブルの行                      | ローカル DB/WAL スナップショット。ネイティブ SQLite 制限 API を備える Node.js 24.x >=24.15 または 26+                                                                         |
-| GPU コードオブジェクト           | CUDA/HIP ターゲット、選択したカーネルの引数とリソース、保持された PTX                       | 組み込みの静的解析 ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                                     |
-| モデルファイル                   | GGUF / safetensors メタデータ、テンソル宣言、導出した合計                                   | ヘッダー解析。任意でファイル全体をハッシュ; [GGUF / safetensors](../model-artifacts.md)                                                                                       |
-| IL2CPP メタデータ                | Unity global-metadata.dat のアセンブリ、型・メソッド名、インデックス範囲                    | バージョン 24、27、29、31、39 を静的デコード。Unity 不要                                                                                                                      |
-| Godot PCK                        | アーカイブ一覧と展開、元のヘッダー・ディレクトリ情報、選択内容の識別情報                    | 形式 2、3、4 を静的解析。Godot 不要                                                                                                                                           |
-| WASM アーティファクト            | 検証、セクション、正確なインポート/エクスポート WAT 形式、デコード済み WAT                  | 利用者が用意 WABT 1.0.42; `inspect_wasm_artifact`                                                                                                                             |
-| APK 署名                         | v1/v2/v3/v3.1 署名者、証明書指紋、鍵ローテーション、ダイジェストの自己整合性                | 組み込みの静的解析; `inspect_apk_signature`                                                                                                                                   |
+| 対象                             | REA が返すもの                                                                              | 要件とガイド                                                                                                                                   |
+| -------------------------------- | ------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------- |
+| ネイティブバイナリ               | 疑似コード、アセンブリ、文字列、シンボル、呼び出し、参照                                    | Hopper、Ghidra、IDA、または Kuna；[ネイティブ分析](../native-investigation.md)                                                                 |
+| オフライン ELF レイアウト        | セクション、セグメント、元のシンボル／再配置情報、静的解析によるセキュリティ対策の候補      | Linux x64 で利用者が用意する pwntools；[バイナリ診断](../binary-diagnostics.md)                                                                |
+| PE certificates                  | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                        |
+| PE imports                       | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                  |
+| EVM バイトコード                 | ディスパッチセレクター、バイトオフセット、推定された引数と状態変更の可否                    | Linux x64 上のローカルの生バイト／16 進数の入力ファイル；[オフライン EVM ガイド](../evm-bytecode.md)                                           |
+| Rust binaries                    | Embedded cargo-auditable dependency list                                                    | [Rust binaries](../rust-binaries.md)                                                                                                           |
+| ELF notes                        | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                   |
+| Binary hardening                 | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                  |
+| Apple IPS crashes                | .ips metadata, threads, images, registers and crash classes                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                  |
+| Linux kernel modules             | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                         |
+| Erlang BEAM                      | IFF chunks, atoms, exports, and tables                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                              |
+| 記録済みの Linux クラッシュ      | 生の note レコード、記録された全スレッドのレジスター／シグナル、任意のマッピング候補        | Linux x64 で利用者が用意する pwntools；GDB/pwndbg は任意；[記録済みクラッシュ](../recorded-crashes.md)                                         |
+| デスクトップのインストール先     | ランタイム候補、根拠ファイル、コンポーネントの目印、次の調査手順                            | 上限付きのディレクトリ・ヘッダー検査；[デスクトップアプリ](../desktop-applications.md)                                                         |
+| JavaScript / Electron            | モジュール、インポート、ソースマップ、ルート、IPC、ネイティブアドオンの関係                 | Node.js と npm；[アプリケーション分析](../javascript-application-workflows.md); Linux: procps `ps`                                             |
+| ウェブサイト                     | ページ構造、スクリプト、ネットワークの観測結果、依頼されたスクリーンショット                | Chrome 系ブラウザー；[ブラウザー分析](../browser-observation.md)                                                                               |
+| 保存済みのネットワークキャプチャ | リクエスト、レスポンス、取得可能なペイロード、ソース内の位置                                | HAR / Fiddler Everywhere SAZ；mitmproxy ネイティブ形式のキャプチャには Linux 上の mitmdump；[キャプチャガイド](../web-network-captures.md)     |
+| パケットキャプチャ               | エンドポイント、DNS、TLS SNI、プロトコル分布、HTTPリクエスト                                | 呼び出し側が用意した tshark と capinfos；[pcapガイド](../pcap-analysis.md)                                                                     |
+| .NET アセンブリ                  | メタデータ、CIL 命令、宣言されたネイティブ依存関係、ビルドの比較                            | 静的な検査；[マネージドコードのガイド](../managed-code-analysis.md)                                                                            |
+| PyInstaller                      | CArchive, PYZ, Python bytecode                                                              | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                          |
+| Android APK                      | マニフェストの宣言、クラス、逆コンパイルされたメソッド、参照                                | Linux/macOS/Windows x64 上のヘッドレス JADX と完全な JDK；[Android ガイド](../android-analysis.md)                                             |
+| Android デバイス                 | デバイス、パッケージ、プロセス、ログ、ダンプ、スクリーンキャプチャ、APK/ファイル転送        | 呼び出し側が用意した adb（エミュレーターまたは実機）；[ADB ガイド](../adb-device-analysis.md)                                                  |
+| JEBプロジェクト                  | エンジンによるプロジェクトユニット、アーティファクトのダイジェスト、型/メソッドの擬似コード | 呼び出し側が起動し MCP を提供する JEB クライアント（REA_JEB_MCP_URL で選択）；[JEB ガイド](../jeb-analysis.md)                                 |
+| Android リソース                 | デコードされたマニフェスト、文字列テーブル、ロケール、バージョン情報                        | 呼び出し側が用意した Apktool ランチャー；[リソースガイド](../apktool-resource-analysis.md)                                                     |
+| Flutter アプリ                   | Dart スナップショットハッシュ、ABI ごとのライブラリダイジェスト、エンジンビルドの来歴       | 不要（静的 APK 解析）；[Flutter ガイド](../flutter-analysis.md)                                                                                |
+| ファームウェア                   | 領域、抽出結果、ネイティブ分析への引き継ぎ                                                  | Linux 上の Binwalk / Unblob；[ファームウェアガイド](../firmware-analysis.md)                                                                   |
+| 記録済みパケット                 | 選択フィールド、繰り返し値、フィルター、デコード指定                                        | Linux: TShark 4.x + prlimit; [キャプチャガイド](../packet-captures.md)                                                                         |
+| 記録済みロジック信号             | デコーダ注釈、サンプル範囲、診断情報                                                        | Linux: sigrok-cli 0.7.2 + prlimit; [信号記録ガイド](../signal-recordings.md)                                                                   |
+| パッケージとリソース             | ファイル一覧、ダイジェスト、plist、Apple バンドルの構造、抽出されたリソース                 | [アーティファクトと JavaScript のガイド](../javascript-artifact-reconstruction.md)、[Apple アプリケーション](../apple-application-analysis.md) |
+| プロセスの動作                   | ターミナル出力、対話、終了とファイルシステムの観測結果、実行の比較                          | ネイティブ PTY を備えた Linux/macOS；[プロセスキャプチャ](../process-capture.md)                                                               |
+| Go バイナリ                      | 埋め込みコンパイラバージョン、モジュール、置換、ビルド設定                                  | 組み込みの静的解析 ELF/PE/thin Mach-O; Go のインストールは不要                                                                                 |
+| SQLite データベース              | テーブル、列、インデックス、ビュー、トリガー、選択した通常テーブルの行                      | ローカル DB/WAL スナップショット。ネイティブ SQLite 制限 API を備える Node.js 24.x >=24.15 または 26+                                          |
+| GPU コードオブジェクト           | CUDA/HIP ターゲット、選択したカーネルの引数とリソース、保持された PTX                       | 組み込みの静的解析 ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                      |
+| モデルファイル                   | GGUF / safetensors メタデータ、テンソル宣言、導出した合計                                   | ヘッダー解析。任意でファイル全体をハッシュ; [GGUF / safetensors](../model-artifacts.md)                                                        |
+| IL2CPP メタデータ                | Unity global-metadata.dat のアセンブリ、型・メソッド名、インデックス範囲                    | バージョン 24、27、29、31、39 を静的デコード。Unity 不要                                                                                       |
+| Godot PCK                        | アーカイブ一覧と展開、元のヘッダー・ディレクトリ情報、選択内容の識別情報                    | 形式 2、3、4 を静的解析。Godot 不要                                                                                                            |
+| WASM アーティファクト            | 検証、セクション、正確なインポート/エクスポート WAT 形式、デコード済み WAT                  | 利用者が用意 WABT 1.0.42; `inspect_wasm_artifact`                                                                                              |
+| APK 署名                         | v1/v2/v3/v3.1 署名者、証明書指紋、鍵ローテーション、ダイジェストの自己整合性                | 組み込みの静的解析; `inspect_apk_signature`                                                                                                    |
 
 静的な JavaScript と .NET の検査は、指定されたファイルを読み取り、アプリケーションを実行しません。実行時キャプチャは、あなたのユーザー権限で対象を実行したり、対象とやり取りしたりします。それぞれの実行時ガイドに、どのような操作が行われるかを記載しています。
 
@@ -199,7 +199,7 @@ REA には Node.js 22.x（>=22.23.4）、24.x（>=24.22.1）、または 26+ (>=
 
 大きなバイナリでは `REA_GHIDRA_STARTUP_TIMEOUT_MS` または `REA_HOPPER_STARTUP_TIMEOUT_MS` でプロバイダーの起動期限を延長できます。
 
-対応するネイティブ形式とホストは、プロバイダーによって異なります。[Hopper と Ghidra のセットアップ](../getting-started/installation.md#hopper)、[IDA ガイド](../providers/ida-provider.md)、[Kuna](../kuna-provider.md)、[Windows 向け Ghidra の実験的対応](../providers/windows-ghidra-p0.md)を参照してください。Ghidra は [16 ビット DOS 分析](../providers/ghidra-dos.md)にも対応しています。プロバイダーの選択は [CLI ガイド](../getting-started/cli.md#choose-a-provider)を参照してください。最新の npm リリース以降に追加された機能については、[リリースでの利用可否](../getting-started/installation.md#released-package-and-main)を確認してください。
+対応するネイティブ形式とホストは、プロバイダーによって異なります。[Hopper と Ghidra のセットアップ](../installation.md#hopper)、[IDA ガイド](../ida-provider.md)、[Kuna](../kuna-provider.md)、[Windows 向け Ghidra の実験的対応](../windows-ghidra-p0.md)を参照してください。Ghidra は [16 ビット DOS 分析](../ghidra-dos.md)にも対応しています。プロバイダーの選択は [CLI ガイド](../cli.md#choose-a-provider)を参照してください。最新の npm リリース以降に追加された機能については、[リリースでの利用可否](../installation.md#released-package-and-main)を確認してください。
 
 ## 事例
 
@@ -280,28 +280,28 @@ REA は実行可能な環境と、起動して応答することを確認する
 <details>
 <summary><strong>どのエージェントで REA を使えますか？</strong></summary>
 
-ローカル MCP サーバーに対応するエージェントなら使えます。セットアップは[対応エージェント](../getting-started/installation.md#supported-agents)を設定します。その他のクライアントでは、[MCP の手動登録](../getting-started/installation.md#mcp-registry)を利用できます。
+ローカル MCP サーバーに対応するエージェントなら使えます。セットアップは[対応エージェント](../installation.md#supported-agents)を設定します。その他のクライアントでは、[MCP の手動登録](../installation.md#mcp-registry)を利用できます。
 
 </details>
 
 <details>
 <summary><strong>Hopper、Ghidra、IDA、Kuna は必要ですか？</strong></summary>
 
-深いネイティブ分析には、そのいずれかを使います。静的な JavaScript と .NET の検査には、ネイティブ分析エンジンは必要ありません。セットアップは承認後に Hopper をインストールできます。Ghidra、IDA、Kuna は既存のインストールを使います。[プロバイダーのセットアップ](../getting-started/installation.md#hopper)を参照してください。
+深いネイティブ分析には、そのいずれかを使います。静的な JavaScript と .NET の検査には、ネイティブ分析エンジンは必要ありません。セットアップは承認後に Hopper をインストールできます。Ghidra、IDA、Kuna は既存のインストールを使います。[プロバイダーのセットアップ](../installation.md#hopper)を参照してください。
 
 </details>
 
 <details>
 <summary><strong>先に Hopper を起動する必要はありますか？</strong></summary>
 
-REA は必要な操作の際に Hopper を起動します。macOS では、初回起動時にデモモードを選ぶか、ライセンスを有効化するよう求められることがあります。[Hopper の起動とトラブルシューティング](../getting-started/installation.md#launcher-paths-and-troubleshooting)を参照してください。
+REA は必要な操作の際に Hopper を起動します。macOS では、初回起動時にデモモードを選ぶか、ライセンスを有効化するよう求められることがあります。[Hopper の起動とトラブルシューティング](../installation.md#launcher-paths-and-troubleshooting)を参照してください。
 
 </details>
 
 <details>
 <summary><strong>skills.sh からスキルをインストールすると何ができますか？</strong></summary>
 
-スキルはエージェントに調査の手順を提供します。`npx rea-agents setup` で REA の MCP サーバーを登録し、対応する手順をインストールしてから、エージェントを再起動してください。[スキルのみのインストール](../getting-started/installation.md#skill-only-installation)を参照してください。
+スキルはエージェントに調査の手順を提供します。`npx rea-agents setup` で REA の MCP サーバーを登録し、対応する手順をインストールしてから、エージェントを再起動してください。[スキルのみのインストール](../installation.md#skill-only-installation)を参照してください。
 
 </details>
 
@@ -344,12 +344,12 @@ npx rea-agents@latest setup
 
 まずはウェブサイトの[実践ガイド](https://rea.tools/ja/guides/)を参照してください。正確なオプション、前提条件、結果の契約については、以下を参照してください。
 
-- [インストールとセットアップ](../getting-started/installation.md)：エージェントの登録、プロバイダーの設定、更新、アンインストール。
-- [準備状況の確認とトラブルシューティング](../getting-started/installation.md#check-readiness-for-your-task)：特定のエージェントや分析エンジンを診断。
-- [CLI と Evidence](../getting-started/cli.md)：コマンド、プロバイダーの選択、スナップショット、インポート／エクスポート、終了ステータス。
-- [MCP 契約](../reference/mcp-contracts.md)と[エージェント向けプロンプト](../getting-started/mcp-prompts.md)：ツールの結果、セッション、ガイド付き調査。
-- [ツールカタログ](../reference/mcp-contracts.md#generated-catalog)：ビルド時に生成されるツール、プロバイダー、CLI コマンドの一覧。
-- [ロードマップ](../development/roadmap.md)：計画中の作業と機能の進捗。
+- [インストールとセットアップ](../installation.md)：エージェントの登録、プロバイダーの設定、更新、アンインストール。
+- [準備状況の確認とトラブルシューティング](../installation.md#check-readiness-for-your-task)：特定のエージェントや分析エンジンを診断。
+- [CLI と Evidence](../cli.md)：コマンド、プロバイダーの選択、スナップショット、インポート／エクスポート、終了ステータス。
+- [MCP 契約](../mcp-contracts.md)と[エージェント向けプロンプト](../mcp-prompts.md)：ツールの結果、セッション、ガイド付き調査。
+- [ツールカタログ](../mcp-contracts.md#generated-catalog)：ビルド時に生成されるツール、プロバイダー、CLI コマンドの一覧。
+- [ロードマップ](../roadmap.md)：計画中の作業と機能の進捗。
 
 脆弱性の報告は [SECURITY.md](../../SECURITY.md) に従ってください。
 
@@ -379,7 +379,7 @@ REA は、法令に従った研究、教育、相互運用性の確保、ソフ
 
 REA への貢献を歓迎します！[issue を作成](https://github.com/morluto/rea/issues)してバグや機能の提案を報告したり、[pull request を送信](https://github.com/morluto/rea/pulls)してコードやドキュメントを改善したりできます。
 
-開発環境とチェックは [CONTRIBUTING.md](../../CONTRIBUTING.md)、検証レーンは[テストガイド](../development/testing.md)、プロジェクト構造は[アーキテクチャ図](../architecture/architecture.mermaid)を参照してください。
+開発環境とチェックは [CONTRIBUTING.md](../../CONTRIBUTING.md)、検証レーンは[テストガイド](../testing.md)、プロジェクト構造は[アーキテクチャ図](../architecture.mermaid)を参照してください。
 
 ## ライセンス
 

docs/readme/README_ko.md

@@ -10,7 +10,7 @@
 **마음에 드는 기능을 발견했다면, 바이너리 수준까지 작동 원리를 이해하세요.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -68,7 +68,7 @@ REA는 에이전트를 분석 도구에 연결해 네이티브 바이너리, Jav
 
 ## 빠른 시작
 
-Linux에서 Ghidra, JADX, 펌웨어 도구를 실행하거나 정적 JavaScript/Electron 분석을 하려면, 프로세스 소유권 확인을 위해 REA의 `PATH`에 procps 호환 `ps`가 있어야 합니다. 해결 방법은 `docs/getting-started/installation.md`의 "Linux owned-process prerequisite" 항목에 있습니다.
+Linux에서 Ghidra, JADX, 펌웨어 도구를 실행하거나 정적 JavaScript/Electron 분석을 하려면, 프로세스 소유권 확인을 위해 REA의 `PATH`에 procps 호환 `ps`가 있어야 합니다. 해결 방법은 `docs/installation.md`의 "Linux owned-process prerequisite" 항목에 있습니다.
 
 ### 에이전트 설정
 
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 에이전트를 선택하고, 예정된 변경 사항을 검토한 뒤 승인하세요. 설정 과정은 기존 설정을 백업하고 REA의 MCP 서버와 버전에 맞는 워크플로 지침을 추가합니다. 완료 후 에이전트를 다시 시작하세요.
 
-설정은 Claude Code, Codex, Cursor, Gemini CLI, Grok Build 및 [다른 에이전트](../getting-started/installation.md#supported-agents)를 지원합니다. 제공자 설정과 수동 MCP 등록은 [설치 및 설정](../getting-started/installation.md)을 참고하세요.
+설정은 Claude Code, Codex, Cursor, Gemini CLI, Grok Build 및 [다른 에이전트](../installation.md#supported-agents)를 지원합니다. 제공자 설정과 수동 MCP 등록은 [설치 및 설정](../installation.md)을 참고하세요.
 
 MCP는 기본적으로 간결한 입력 스키마를 사용합니다. 전체 필드 안내와 중첩 검증 정보가 필요하면 MCP 등록에서 `REA_MCP_INPUT_SCHEMA_PROFILE=full`을 설정하세요. 두 프로필 모두 전체 도구와 동일한 정규 서버 검증을 유지합니다. MCP 계약 가이드를 참고하세요.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-네이티브 분석에는 먼저 제공자를 설정해야 합니다. 네이티브 명령, 제공자 선택, 스냅샷, 스크립트 사용은 [CLI 및 Evidence 가이드](../getting-started/cli.md)를 참고하세요.
+네이티브 분석에는 먼저 제공자를 설정해야 합니다. 네이티브 명령, 제공자 선택, 스냅샷, 스크립트 사용은 [CLI 및 Evidence 가이드](../cli.md)를 참고하세요.
 
 ### REA 업데이트
 
@@ -151,45 +151,45 @@ npx rea-agents@latest setup
 
 REA에는 Node.js 22.x(>=22.23.4), 24.x(>=24.22.1) 또는 26+ (>=26.12.1)와 npm이 필요합니다. 추가 도구와 호스트 지원은 대상에 따라 다릅니다.
 
-| 대상                   | REA가 반환하는 내용                                                           | 요구 사항 및 가이드                                                                                                                                              |
-| ---------------------- | ----------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| 네이티브 바이너리      | 의사 코드, 어셈블리, 문자열, 심볼, 호출, 참조                                 | Hopper, Ghidra, IDA 또는 Kuna; [네이티브 분석](../guides/native/native-investigation.md)                                                                         |
-| 오프라인 ELF 레이아웃  | 섹션, 세그먼트, 원본 심볼/재배치 정보, 정적 분석으로 얻은 보안 완화 기법 후보 | Linux x64에서 호출자가 제공하는 pwntools; [바이너리 진단](../guides/native/binary-diagnostics.md)                                                                |
-| Go 바이너리            | 내장된 컴파일러 버전, 모듈, `replace` 지시어, 빌드 설정                       | REA 내장 ELF/PE/thin Mach-O 정적 검사; Go 설치 불필요                                                                                                            |
-| Rust 바이너리          | cargo-auditable이 내장한 크레이트 이름, 버전, 소스, 의존성 관계               | REA 내장 ELF/PE/thin Mach-O 정적 검사; [Rust 바이너리](../rust-binaries.md)                                                                                      |
-| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields  | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                          |
-| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash    | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                    |
-| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields               | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                     |
-| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O           | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                    |
-| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                   | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                    |
-| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer   | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                           |
-| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                        | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                |
-| WASM 아티팩트          | 유효성 검사, 섹션, import/export의 정확한 WAT 형식, 디코딩된 WAT              | 호출자 제공 WABT 1.0.42; `inspect_wasm_artifact`                                                                                                                 |
-| EVM 바이트코드         | 디스패치 선택자, 바이트 오프셋, 추론한 인자와 상태 변경 가능 여부             | Linux x64의 로컬 원시 바이트/16진수 입력 파일; [오프라인 EVM 가이드](../guides/evm/evm-bytecode.md)                                                              |
-| SQLite 데이터베이스    | 테이블, 열, 인덱스, 뷰, 트리거, 선택한 일반 테이블의 행                       | 로컬 데이터베이스/WAL 스냅샷; Node.js 24.15 이상의 24.x 또는 26 이상(네이티브 SQLite 한도 적용)                                                                  |
-| 기록된 Linux 크래시    | 원시 note 레코드, 기록된 모든 스레드의 레지스터/시그널, 선택적 매핑 후보      | Linux x64에서 호출자가 제공하는 pwntools; GDB/pwndbg는 선택 사항; [기록된 크래시](../guides/native/recorded-crashes.md)                                          |
-| 데스크톱 설치 디렉터리 | 런타임 후보, 근거 파일, 구성 요소 표시와 다음 조사 단계                       | 범위가 제한된 디렉터리 및 헤더 검사；[데스크톱 애플리케이션](../desktop-applications.md)                                                                         |
-| JavaScript / Electron  | 모듈, 임포트, 소스 맵, 라우트, IPC, 네이티브 애드온 관계                      | Node.js와 npm; Linux: procps 호환 `ps`; [애플리케이션 분석](../guides/javascript/javascript-application-workflows.md)                                            |
-| 웹사이트               | 페이지 구조, 스크립트, 네트워크 관찰 결과, 요청한 스크린샷                    | Chrome 계열 브라우저; [브라우저 분석](../guides/web/browser-observation.md)                                                                                      |
-| 저장된 네트워크 캡처   | 요청, 응답, 접근 가능한 페이로드, 소스 위치                                   | HAR 또는 Fiddler Everywhere SAZ; mitmproxy 네이티브 캡처에는 Linux의 mitmdump; [캡처 가이드](../guides/web/web-network-captures.md)                              |
-| .NET 어셈블리          | 메타데이터, CIL 명령, 선언된 네이티브 의존성, 빌드 비교                       | 별도 도구 불필요(정적 검사만); [관리 코드 가이드](../guides/managed/managed-code-analysis.md)                                                                    |
-| Android APK            | 매니페스트 선언, 클래스, 디컴파일된 메서드, 참조                              | Linux/macOS/Windows x64의 헤드리스 JADX와 전체 JDK; [Android 가이드](../guides/android/android-analysis.md)                                                      |
-| Android 기기           | 기기, 패키지, 프로세스, 로그, 덤프, 화면 캡처, APK/파일 전송                  | 호출자 제공 adb(에뮬레이터 또는 실제 기기); [ADB 가이드](../guides/android/adb-device-analysis.md)                                                               |
-| JEB 프로젝트           | 엔진 기반 프로젝트 유닛, 아티팩트 해시, 타입/메서드 의사코드                  | 호출자가 시작하고 MCP를 제공하는 JEB 클라이언트(REA_JEB_MCP_URL로 선택); [JEB 가이드](../providers/jeb-analysis.md)                                              |
-| Android 리소스         | 디코딩된 매니페스트, 문자열 테이블, 로캘, 버전 정보                           | 호출자 제공 Apktool 런처; [리소스 가이드](../guides/android/apktool-resource-analysis.md)                                                                        |
-| Flutter 앱             | Dart 스냅샷 해시, ABI별 라이브러리 해시, 엔진 빌드 출처                       | 없음 (정적 APK 파싱); [Flutter 가이드](../guides/android/flutter-analysis.md)                                                                                    |
-| 펌웨어                 | 영역, 추출 결과, 네이티브 분석으로 전달할 정보                                | Linux의 Binwalk / Unblob; [펌웨어 가이드](../guides/firmware/firmware-analysis.md)                                                                               |
-| 기록된 패킷            | 선택 필드, 반복 값, 필터 및 디코딩 규칙                                       | Linux: TShark 4.x + prlimit; [캡처 가이드](../guides/data/packet-captures.md)                                                                                    |
-| 패킷 요약              | 엔드포인트, DNS, TLS SNI, 프로토콜 분포, HTTP 요청                            | 호출자 제공 tshark 및 capinfos(Linux에서 검증됨); [pcap 가이드](../guides/data/pcap-analysis.md)                                                                 |
-| 기록된 논리 신호       | 디코더 주석, 샘플 범위, 진단 정보                                             | Linux: sigrok-cli 0.7.2 + prlimit; [신호 기록 가이드](../guides/signals/signal-recordings.md)                                                                    |
-| 패키지 및 리소스       | 파일 목록, 다이제스트, plist, Apple 번들 구조, 추출한 리소스                  | [아티팩트 및 JavaScript 가이드](../guides/javascript/javascript-artifact-reconstruction.md), [Apple 애플리케이션](../guides/apple/apple-application-analysis.md) |
-| 프로세스 동작          | 터미널 출력, 상호작용, 종료 및 파일 시스템 관찰 결과, 실행 비교               | 네이티브 PTY를 지원하는 Linux/macOS; [프로세스 캡처](../guides/runtime/process-capture.md)                                                                       |
-| PyInstaller            | CArchive, PYZ, Python bytecode                                                | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                            |
-| GPU 코드 객체          | CUDA/HIP 대상, 선택한 커널 매개변수와 자원, 보존된 PTX 텍스트                 | 내장 정적 검사 ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                            |
-| 모델 파일              | GGUF / safetensors 메타데이터, 텐서 선언과 계산한 합계                        | 헤더 검사; 전체 파일 해시는 선택 사항; [GGUF / safetensors](../model-artifacts.md)                                                                               |
-| IL2CPP 메타데이터      | Unity global-metadata.dat 어셈블리 이미지, 형식·메서드 이름과 인덱스 범위     | 버전 24, 27, 29, 31, 39 정적 디코딩; Unity 불필요                                                                                                                |
-| Godot PCK              | 아카이브 목록과 추출, 원본 헤더·디렉터리 정보, 선택한 내용 식별 정보          | 정적 형식 2, 3, 4; Godot 불필요                                                                                                                                  |
-| APK 서명               | v1/v2/v3/v3.1 서명자, 인증서 지문, 키 교체와 다이제스트 자체 일관성           | 내장 정적 검사; `inspect_apk_signature`                                                                                                                          |
+| 대상                   | REA가 반환하는 내용                                                           | 요구 사항 및 가이드                                                                                                               |
+| ---------------------- | ----------------------------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------- |
+| 네이티브 바이너리      | 의사 코드, 어셈블리, 문자열, 심볼, 호출, 참조                                 | Hopper, Ghidra, IDA 또는 Kuna; [네이티브 분석](../native-investigation.md)                                                        |
+| 오프라인 ELF 레이아웃  | 섹션, 세그먼트, 원본 심볼/재배치 정보, 정적 분석으로 얻은 보안 완화 기법 후보 | Linux x64에서 호출자가 제공하는 pwntools; [바이너리 진단](../binary-diagnostics.md)                                               |
+| Go 바이너리            | 내장된 컴파일러 버전, 모듈, `replace` 지시어, 빌드 설정                       | REA 내장 ELF/PE/thin Mach-O 정적 검사; Go 설치 불필요                                                                             |
+| Rust 바이너리          | cargo-auditable이 내장한 크레이트 이름, 버전, 소스, 의존성 관계               | REA 내장 ELF/PE/thin Mach-O 정적 검사; [Rust 바이너리](../rust-binaries.md)                                                       |
+| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields  | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                           |
+| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash    | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                     |
+| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields               | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                      |
+| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O           | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                     |
+| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                   | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                     |
+| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer   | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                            |
+| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                        | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                 |
+| WASM 아티팩트          | 유효성 검사, 섹션, import/export의 정확한 WAT 형식, 디코딩된 WAT              | 호출자 제공 WABT 1.0.42; `inspect_wasm_artifact`                                                                                  |
+| EVM 바이트코드         | 디스패치 선택자, 바이트 오프셋, 추론한 인자와 상태 변경 가능 여부             | Linux x64의 로컬 원시 바이트/16진수 입력 파일; [오프라인 EVM 가이드](../evm-bytecode.md)                                          |
+| SQLite 데이터베이스    | 테이블, 열, 인덱스, 뷰, 트리거, 선택한 일반 테이블의 행                       | 로컬 데이터베이스/WAL 스냅샷; Node.js 24.15 이상의 24.x 또는 26 이상(네이티브 SQLite 한도 적용)                                   |
+| 기록된 Linux 크래시    | 원시 note 레코드, 기록된 모든 스레드의 레지스터/시그널, 선택적 매핑 후보      | Linux x64에서 호출자가 제공하는 pwntools; GDB/pwndbg는 선택 사항; [기록된 크래시](../recorded-crashes.md)                         |
+| 데스크톱 설치 디렉터리 | 런타임 후보, 근거 파일, 구성 요소 표시와 다음 조사 단계                       | 범위가 제한된 디렉터리 및 헤더 검사；[데스크톱 애플리케이션](../desktop-applications.md)                                          |
+| JavaScript / Electron  | 모듈, 임포트, 소스 맵, 라우트, IPC, 네이티브 애드온 관계                      | Node.js와 npm; Linux: procps 호환 `ps`; [애플리케이션 분석](../javascript-application-workflows.md)                               |
+| 웹사이트               | 페이지 구조, 스크립트, 네트워크 관찰 결과, 요청한 스크린샷                    | Chrome 계열 브라우저; [브라우저 분석](../browser-observation.md)                                                                  |
+| 저장된 네트워크 캡처   | 요청, 응답, 접근 가능한 페이로드, 소스 위치                                   | HAR 또는 Fiddler Everywhere SAZ; mitmproxy 네이티브 캡처에는 Linux의 mitmdump; [캡처 가이드](../web-network-captures.md)          |
+| .NET 어셈블리          | 메타데이터, CIL 명령, 선언된 네이티브 의존성, 빌드 비교                       | 별도 도구 불필요(정적 검사만); [관리 코드 가이드](../managed-code-analysis.md)                                                    |
+| Android APK            | 매니페스트 선언, 클래스, 디컴파일된 메서드, 참조                              | Linux/macOS/Windows x64의 헤드리스 JADX와 전체 JDK; [Android 가이드](../android-analysis.md)                                      |
+| Android 기기           | 기기, 패키지, 프로세스, 로그, 덤프, 화면 캡처, APK/파일 전송                  | 호출자 제공 adb(에뮬레이터 또는 실제 기기); [ADB 가이드](../adb-device-analysis.md)                                               |
+| JEB 프로젝트           | 엔진 기반 프로젝트 유닛, 아티팩트 해시, 타입/메서드 의사코드                  | 호출자가 시작하고 MCP를 제공하는 JEB 클라이언트(REA_JEB_MCP_URL로 선택); [JEB 가이드](../jeb-analysis.md)                         |
+| Android 리소스         | 디코딩된 매니페스트, 문자열 테이블, 로캘, 버전 정보                           | 호출자 제공 Apktool 런처; [리소스 가이드](../apktool-resource-analysis.md)                                                        |
+| Flutter 앱             | Dart 스냅샷 해시, ABI별 라이브러리 해시, 엔진 빌드 출처                       | 없음 (정적 APK 파싱); [Flutter 가이드](../flutter-analysis.md)                                                                    |
+| 펌웨어                 | 영역, 추출 결과, 네이티브 분석으로 전달할 정보                                | Linux의 Binwalk / Unblob; [펌웨어 가이드](../firmware-analysis.md)                                                                |
+| 기록된 패킷            | 선택 필드, 반복 값, 필터 및 디코딩 규칙                                       | Linux: TShark 4.x + prlimit; [캡처 가이드](../packet-captures.md)                                                                 |
+| 패킷 요약              | 엔드포인트, DNS, TLS SNI, 프로토콜 분포, HTTP 요청                            | 호출자 제공 tshark 및 capinfos(Linux에서 검증됨); [pcap 가이드](../pcap-analysis.md)                                              |
+| 기록된 논리 신호       | 디코더 주석, 샘플 범위, 진단 정보                                             | Linux: sigrok-cli 0.7.2 + prlimit; [신호 기록 가이드](../signal-recordings.md)                                                    |
+| 패키지 및 리소스       | 파일 목록, 다이제스트, plist, Apple 번들 구조, 추출한 리소스                  | [아티팩트 및 JavaScript 가이드](../javascript-artifact-reconstruction.md), [Apple 애플리케이션](../apple-application-analysis.md) |
+| 프로세스 동작          | 터미널 출력, 상호작용, 종료 및 파일 시스템 관찰 결과, 실행 비교               | 네이티브 PTY를 지원하는 Linux/macOS; [프로세스 캡처](../process-capture.md)                                                       |
+| PyInstaller            | CArchive, PYZ, Python bytecode                                                | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                             |
+| GPU 코드 객체          | CUDA/HIP 대상, 선택한 커널 매개변수와 자원, 보존된 PTX 텍스트                 | 내장 정적 검사 ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                             |
+| 모델 파일              | GGUF / safetensors 메타데이터, 텐서 선언과 계산한 합계                        | 헤더 검사; 전체 파일 해시는 선택 사항; [GGUF / safetensors](../model-artifacts.md)                                                |
+| IL2CPP 메타데이터      | Unity global-metadata.dat 어셈블리 이미지, 형식·메서드 이름과 인덱스 범위     | 버전 24, 27, 29, 31, 39 정적 디코딩; Unity 불필요                                                                                 |
+| Godot PCK              | 아카이브 목록과 추출, 원본 헤더·디렉터리 정보, 선택한 내용 식별 정보          | 정적 형식 2, 3, 4; Godot 불필요                                                                                                   |
+| APK 서명               | v1/v2/v3/v3.1 서명자, 인증서 지문, 키 교체와 다이제스트 자체 일관성           | 내장 정적 검사; `inspect_apk_signature`                                                                                           |
 
 정적 JavaScript 및 .NET 검사는 제공된 파일을 읽으며 애플리케이션을 실행하지 않습니다. 런타임 캡처는 사용자의 권한으로 선택한 대상을 실행하거나 대상과 상호작용합니다. 각 런타임 가이드에서 그 영향을 설명합니다.
 
@@ -197,7 +197,7 @@ REA에는 Node.js 22.x(>=22.23.4), 24.x(>=24.22.1) 또는 26+ (>=26.12.1)와 npm
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-지원하는 네이티브 형식과 호스트는 제공자마다 다릅니다. [Hopper 및 Ghidra 설정](../getting-started/installation.md#hopper), [IDA 가이드](../providers/ida-provider.md)(선택 사항인 네이티브 MCP 브리지 포함), [Kuna](../kuna-provider.md), [실험적 Windows Ghidra 지원](../providers/windows-ghidra-p0.md)을 참고하세요. Ghidra는 [16비트 DOS 분석](../providers/ghidra-dos.md)도 지원합니다. 큰 바이너리를 분석할 때는 `REA_GHIDRA_STARTUP_TIMEOUT_MS` 또는 `REA_HOPPER_STARTUP_TIMEOUT_MS`로 제공자의 시작 제한 시간을 늘리세요. 제공자 선택은 [CLI 가이드](../getting-started/cli.md#choose-a-provider)를 참고하세요. 최신 npm 릴리스 이후 추가된 기능은 [릴리스에서의 사용 가능 여부](../getting-started/installation.md#released-package-and-main)를 확인하세요.
+지원하는 네이티브 형식과 호스트는 제공자마다 다릅니다. [Hopper 및 Ghidra 설정](../installation.md#hopper), [IDA 가이드](../ida-provider.md)(선택 사항인 네이티브 MCP 브리지 포함), [Kuna](../kuna-provider.md), [실험적 Windows Ghidra 지원](../windows-ghidra-p0.md)을 참고하세요. Ghidra는 [16비트 DOS 분석](../ghidra-dos.md)도 지원합니다. 큰 바이너리를 분석할 때는 `REA_GHIDRA_STARTUP_TIMEOUT_MS` 또는 `REA_HOPPER_STARTUP_TIMEOUT_MS`로 제공자의 시작 제한 시간을 늘리세요. 제공자 선택은 [CLI 가이드](../cli.md#choose-a-provider)를 참고하세요. 최신 npm 릴리스 이후 추가된 기능은 [릴리스에서의 사용 가능 여부](../installation.md#released-package-and-main)를 확인하세요.
 
 ## 사례
 
@@ -278,28 +278,28 @@ REA는 실행 가능한 환경과 시작 및 응답 여부를 확인하는 기
 <details>
 <summary><strong>어떤 에이전트에서 REA를 사용할 수 있나요?</strong></summary>
 
-로컬 MCP 서버를 지원하는 에이전트라면 사용할 수 있습니다. 설정 과정은 [지원하는 에이전트](../getting-started/installation.md#supported-agents)를 구성합니다. 다른 클라이언트는 [수동 MCP 등록](../getting-started/installation.md#mcp-registry)을 이용할 수 있습니다.
+로컬 MCP 서버를 지원하는 에이전트라면 사용할 수 있습니다. 설정 과정은 [지원하는 에이전트](../installation.md#supported-agents)를 구성합니다. 다른 클라이언트는 [수동 MCP 등록](../installation.md#mcp-registry)을 이용할 수 있습니다.
 
 </details>
 
 <details>
 <summary><strong>Hopper, Ghidra, IDA 또는 Kuna가 필요한가요?</strong></summary>
 
-심층 네이티브 분석에는 이 중 하나를 사용합니다. 정적 JavaScript 및 .NET 검사에는 네이티브 분석 엔진이 필요하지 않습니다. 설정 과정에서 승인 후 Hopper를 설치할 수 있으며, Ghidra, IDA, Kuna는 기존 설치를 사용합니다. [제공자 설정](../getting-started/installation.md#hopper)을 참고하세요.
+심층 네이티브 분석에는 이 중 하나를 사용합니다. 정적 JavaScript 및 .NET 검사에는 네이티브 분석 엔진이 필요하지 않습니다. 설정 과정에서 승인 후 Hopper를 설치할 수 있으며, Ghidra, IDA, Kuna는 기존 설치를 사용합니다. [제공자 설정](../installation.md#hopper)을 참고하세요.
 
 </details>
 
 <details>
 <summary><strong>Hopper를 먼저 실행해야 하나요?</strong></summary>
 
-REA는 작업에 필요할 때 Hopper를 실행합니다. macOS에서는 처음 실행할 때 데모 모드를 선택하거나 라이선스를 활성화하라는 대화 상자가 나타날 수 있습니다. 첫 CLI/MCP 작업이나 무인 작업을 실행하기 전에 같은 사용자 세션에서 이 대화 상자를 완료하세요. 필요하면 Hopper를 직접 여세요. [Hopper 실행 및 문제 해결](../getting-started/installation.md#launcher-paths-and-troubleshooting)을 참고하세요.
+REA는 작업에 필요할 때 Hopper를 실행합니다. macOS에서는 처음 실행할 때 데모 모드를 선택하거나 라이선스를 활성화하라는 대화 상자가 나타날 수 있습니다. 첫 CLI/MCP 작업이나 무인 작업을 실행하기 전에 같은 사용자 세션에서 이 대화 상자를 완료하세요. 필요하면 Hopper를 직접 여세요. [Hopper 실행 및 문제 해결](../installation.md#launcher-paths-and-troubleshooting)을 참고하세요.
 
 </details>
 
 <details>
 <summary><strong>skills.sh에서 설치하는 스킬은 어떤 역할을 하나요?</strong></summary>
 
-스킬은 에이전트에게 조사 지침을 제공합니다. `npx rea-agents setup`으로 REA의 MCP 서버를 등록하고 버전에 맞는 지침을 설치한 뒤 에이전트를 다시 시작하세요. [스킬만 설치하기](../getting-started/installation.md#skill-only-installation)를 참고하세요.
+스킬은 에이전트에게 조사 지침을 제공합니다. `npx rea-agents setup`으로 REA의 MCP 서버를 등록하고 버전에 맞는 지침을 설치한 뒤 에이전트를 다시 시작하세요. [스킬만 설치하기](../installation.md#skill-only-installation)를 참고하세요.
 
 </details>
 
@@ -342,12 +342,12 @@ npx rea-agents@latest setup
 
 웹사이트의 [실습 가이드](https://rea.tools/ko/guides/)부터 읽어 보세요. 정확한 옵션, 사전 요구 사항, 결과 계약은 다음 문서를 참고하세요.
 
-- [설치 및 설정](../getting-started/installation.md): 에이전트 등록, 제공자 설정, 업데이트, 제거.
-- [준비 상태 확인 및 문제 해결](../getting-started/installation.md#check-readiness-for-your-task): 특정 에이전트 또는 분석 엔진 진단.
-- [CLI 및 Evidence](../getting-started/cli.md): 명령, 제공자 선택, 스냅샷, 가져오기/내보내기, 종료 상태.
-- [MCP 계약](../reference/mcp-contracts.md) 및 [에이전트 프롬프트](../getting-started/mcp-prompts.md): 도구 결과, 세션, 안내에 따른 조사.
-- [도구 카탈로그](../reference/mcp-contracts.md#generated-catalog): 빌드 시 생성되는 도구, 제공자, CLI 명령 목록.
-- [로드맵](../development/roadmap.md): 계획된 작업과 기능 진행 상황.
+- [설치 및 설정](../installation.md): 에이전트 등록, 제공자 설정, 업데이트, 제거.
+- [준비 상태 확인 및 문제 해결](../installation.md#check-readiness-for-your-task): 특정 에이전트 또는 분석 엔진 진단.
+- [CLI 및 Evidence](../cli.md): 명령, 제공자 선택, 스냅샷, 가져오기/내보내기, 종료 상태.
+- [MCP 계약](../mcp-contracts.md) 및 [에이전트 프롬프트](../mcp-prompts.md): 도구 결과, 세션, 안내에 따른 조사.
+- [도구 카탈로그](../mcp-contracts.md#generated-catalog): 빌드 시 생성되는 도구, 제공자, CLI 명령 목록.
+- [로드맵](../roadmap.md): 계획된 작업과 기능 진행 상황.
 
 취약점은 [SECURITY.md](../../SECURITY.md)에 따라 보고하세요.
 
@@ -377,7 +377,7 @@ REA는 법을 준수하는 연구, 교육, 상호운용성 확보, 소프트웨
 
 REA에 도움을 보태 주세요! [issue를 등록](https://github.com/morluto/rea/issues)해 버그나 기능을 제안하거나, [pull request를 보내](https://github.com/morluto/rea/pulls) 코드와 문서를 개선할 수 있습니다.
 
-개발 환경과 검사 항목은 [CONTRIBUTING.md](../../CONTRIBUTING.md), 검증 절차는 [테스트 가이드](../development/testing.md), 프로젝트 구조는 [아키텍처 지도](../architecture/architecture.mermaid)를 참고하세요.
+개발 환경과 검사 항목은 [CONTRIBUTING.md](../../CONTRIBUTING.md), 검증 절차는 [테스트 가이드](../testing.md), 프로젝트 구조는 [아키텍처 지도](../architecture.mermaid)를 참고하세요.
 
 한국어 번역도 개선할 수 있습니다. 이 README를 수정할 때는 [영문 README](../../README.md)의 명령어, 요구 사항, 분석 범위와 일치하는지 확인하세요. 웹사이트 번역은 `website/locales/ko/messages.po`의 `msgstr` 값을 수정하세요.
 

docs/readme/README_ml.md

@@ -10,7 +10,7 @@
 **നിങ്ങൾക്ക് ഇഷ്ടപ്പെട്ട ഒരു feature കണ്ടോ? അത് എങ്ങനെ പ്രവർത്തിക്കുന്നു എന്ന് binary തലത്തിലേക്ക് വരെ മനസ്സിലാക്കൂ.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#എന്തൊക്കെ-വിശകലനം-ചെയ്യാം)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -70,7 +70,7 @@ Setup നിങ്ങളുടെ agent-ിൽ REA രജിസ്റ്റർ
 
 ## ദ്രുതാരംഭം
 
-Linux-ൽ Ghidra, JADX, firmware tool launches, static JavaScript/Electron analysis എന്നിവയ്ക്ക് process ownership പരിശോധിക്കാൻ REA-യുടെ `PATH`-ൽ procps-compatible `ps` ആവശ്യമാണ്. പരിഹാര നടപടികൾ `docs/getting-started/installation.md`-യിലെ "Linux owned-process prerequisite" എന്ന വിഭാഗത്തിൽ ലഭ്യമാണ്.
+Linux-ൽ Ghidra, JADX, firmware tool launches, static JavaScript/Electron analysis എന്നിവയ്ക്ക് process ownership പരിശോധിക്കാൻ REA-യുടെ `PATH`-ൽ procps-compatible `ps` ആവശ്യമാണ്. പരിഹാര നടപടികൾ `docs/installation.md`-യിലെ "Linux owned-process prerequisite" എന്ന വിഭാഗത്തിൽ ലഭ്യമാണ്.
 
 ### നിങ്ങളുടെ agent സജ്ജമാക്കുക
 
@@ -82,7 +82,7 @@ npx rea-agents setup
 
 നിങ്ങൾ ഉപയോഗിക്കുന്ന agents തിരഞ്ഞെടുക്കുക, നിർദ്ദേശിച്ച മാറ്റങ്ങൾ പരിശോധിക്കുക, തുടർന്ന് അവയ്ക്ക് അനുമതി നൽകുക. നിലവിലുള്ള configuration-ന്റെ backup-ുകൾ സൂക്ഷിച്ചുകൊണ്ട് setup, REA-യുടെ MCP server-ഉം അനുയോജ്യമായ workflow നിർദ്ദേശങ്ങളും ചേർക്കും. അതിനുശേഷം നിങ്ങളുടെ agent വീണ്ടും ആരംഭിക്കുക.
 
-Claude Code, Codex, Cursor, Gemini CLI, Grok Build, കൂടാതെ [മറ്റ് agents](../getting-started/installation.md#supported-agents) എന്നിവയെ setup പിന്തുണയ്ക്കുന്നു. provider configuration-നും manual MCP registration-നും [installation and setup](../getting-started/installation.md) കാണുക.
+Claude Code, Codex, Cursor, Gemini CLI, Grok Build, കൂടാതെ [മറ്റ് agents](../installation.md#supported-agents) എന്നിവയെ setup പിന്തുണയ്ക്കുന്നു. provider configuration-നും manual MCP registration-നും [installation and setup](../installation.md) കാണുക.
 
 MCP സാധാരണയായി compact input schemas ഉപയോഗിക്കുന്നു. പൂർണ്ണ field guidance-ഉം nested validation details-ഉം വേണമെങ്കിൽ MCP registration-ൽ `REA_MCP_INPUT_SCHEMA_PROFILE=full` സജ്ജമാക്കുക. രണ്ടു profiles-ലും എല്ലാ tools-ഉം ഒരേ canonical server validation-ഉം നിലനിൽക്കും; MCP contracts guide കാണുക.
 
@@ -111,7 +111,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Native analysis നടത്തുന്നതിന് മുമ്പ് ഒരു provider ക്രമീകരിക്കുക. Native commands, provider തിരഞ്ഞെടുക്കൽ, snapshots, scripting എന്നിവയ്ക്കായി [CLI and Evidence guide](../getting-started/cli.md) കാണുക.
+Native analysis നടത്തുന്നതിന് മുമ്പ് ഒരു provider ക്രമീകരിക്കുക. Native commands, provider തിരഞ്ഞെടുക്കൽ, snapshots, scripting എന്നിവയ്ക്കായി [CLI and Evidence guide](../cli.md) കാണുക.
 
 ### REA അപ്‌ഡേറ്റ് ചെയ്യുക
 
@@ -151,45 +151,45 @@ Target പരിശോധിക്കാനും പ്രസക്തമായ
 
 REA-യ്ക്ക് Node.js 22.x (>=22.23.4), 24.x (>=24.22.1), അല്ലെങ്കിൽ 26+ (>=26.12.1) പതിപ്പും npm-ഉം ആവശ്യമാണ്. Target അനുസരിച്ച് അധിക tools-ഉം host support-ഉം വ്യത്യാസപ്പെടും:
 
-| Target                 | REA നൽകുന്ന ഫലങ്ങൾ                                                                             | ആവശ്യകതകളും ഗൈഡും                                                                                                                                                   |
-| ---------------------- | ------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Native binaries        | Pseudocode, assembly, strings, symbols, calls, references                                   | Hopper, Ghidra, IDA അല്ലെങ്കിൽ Kuna; [native analysis](../guides/native/native-investigation.md)                                                                   |
-| Offline ELF layout     | Sections, segments, യഥാർത്ഥ symbols/relocations, static mitigation candidates                 | Linux x64-ൽ caller നൽകുന്ന pwntools; [binary diagnostics](../guides/native/binary-diagnostics.md)                                                                  |
-| Go binaries            | ഉൾച്ചേർത്ത compiler version, modules, replacements, build settings                            | Built-in static ELF/PE/thin Mach-O പരിശോധന; Go installation ആവശ്യമില്ല                                                                                             |
-| Rust binaries          | ഉൾച്ചേർത്ത cargo-auditable crate പേരുകൾ, versions, sources, dependency edges                   | Built-in static ELF/PE/thin Mach-O പരിശോധന; [Rust binaries](../rust-binaries.md)                                                                                 |
-| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                          |
-| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                    |
-| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                     |
-| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                    |
-| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                           |
-| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                |
-| WASM artifact          | Validation, sections, കൃത്യമായ import/export WAT രൂപങ്ങൾ, decoded WAT                            | Caller നൽകുന്ന WABT 1.0.42; `inspect_wasm_artifact`                                                                                                                |
-| EVM bytecode           | Dispatch selectors, byte offsets, അനുമാനിച്ച arguments, mutability                             | Linux x64-ൽ local raw/hex carrier; [offline EVM guide](../guides/evm/evm-bytecode.md)                                                                            |
-| SQLite databases       | Tables, columns, indexes, views, triggers, തിരഞ്ഞെടുത്ത സാധാരണ table rows                        | Local database/WAL snapshot; native SQLite പരിമിതികളോടെ Node.js 24.x >=24.15 അല്ലെങ്കിൽ 26+                                                                        |
-| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                    |
-| Recorded Linux crashes | Raw notes, രേഖപ്പെടുത്തിയ ഓരോ thread-ന്റെയും registers/signals, ഐച്ഛിക mapping candidates         | Linux x64-ൽ caller നൽകുന്ന pwntools; ഐച്ഛിക GDB/pwndbg; [recorded crashes](../guides/native/recorded-crashes.md)                                                    |
-| ഡെസ്ക്ടോപ്പ് ഇൻസ്റ്റലേഷനുകൾ   | റൺടൈം സാധ്യതകൾ, തെളിവ് ഫയലുകൾ, ഘടക സൂചനകൾ, തുടർ നടപടികൾ                                           | പരിധിയുള്ള ഡയറക്ടറി, ഹെഡർ പരിശോധന；[ഡെസ്ക്ടോപ്പ് ആപ്ലിക്കേഷനുകൾ](../desktop-applications.md)                                                                               |
-| JavaScript / Electron  | Modules, imports, source maps, routes, IPC, native add-on ബന്ധങ്ങൾ                            | Node.js, npm; Linux: procps-compatible `ps`; [application analysis](../guides/javascript/javascript-application-workflows.md)                                    |
-| Websites               | Page structure, scripts, network observations, ആവശ്യപ്പെട്ട screenshots                        | Chrome-family browser; [browser analysis](../guides/web/browser-observation.md)                                                                                  |
-| Saved network captures | Requests, responses, പുറത്തുകാണുന്ന payload-ുകൾ, source locations                                  | HAR അല്ലെങ്കിൽ Fiddler Everywhere SAZ; native mitmproxy-നായി Linux-ൽ mitmdump; [capture guide](../guides/web/web-network-captures.md)                               |
-| .NET assemblies        | Metadata, CIL instructions, പ്രഖ്യാപിച്ച native dependencies, build comparisons                 | ഒന്നും ആവശ്യമില്ല (static മാത്രം); [managed-code guide](../guides/managed/managed-code-analysis.md)                                                                    |
-| Python packaged apps   | CArchive/PYZ entries, Python version, bytecode, resources and runtime options               | Static PyInstaller parsing; [Python guide](../python-packaged-applications.md)                                                                                   |
-| Android APKs           | Manifest declarations, classes, decompiled methods, references                              | Linux/macOS/Windows x64-ൽ Headless JADX-ഉം full JDK-ഉം; [Android guide](../guides/android/android-analysis.md)                                                   |
-| Android devices        | Devices, packages, processes, logs, dumps, screen captures, APK/file transfers              | Caller നൽകുന്ന adb (emulator അല്ലെങ്കിൽ hardware); [ADB guide](../guides/android/adb-device-analysis.md)                                                             |
-| JEB projects           | Engine-backed project units, artifact digests, type/method pseudo-code                      | MCP സേവനം നൽകുന്ന caller ആരംഭിച്ച JEB client; REA_JEB_MCP_URL ഉപയോഗിച്ച് തിരഞ്ഞെടുക്കുക; [JEB guide](../providers/jeb-analysis.md)                                        |
-| Android resources      | Decoded manifest, string tables, locales, version വിവരങ്ങൾ                                   | Caller നൽകുന്ന Apktool launcher; [resource guide](../guides/android/apktool-resource-analysis.md)                                                                  |
-| Flutter apps           | Dart snapshot hash, ഓരോ ABI-യിലെയും library digests, engine build provenance                 | ഒന്നും ആവശ്യമില്ല (static APK parsing); [Flutter guide](../guides/android/flutter-analysis.md)                                                                       |
-| Firmware               | Regions, extraction results, native-analysis handoffs                                       | Linux-ൽ Binwalk / Unblob; [firmware guide](../guides/firmware/firmware-analysis.md)                                                                              |
-| Recorded packets       | തിരഞ്ഞെടുത്ത fields, ആവർത്തിക്കുന്ന values, filters, decode-as rules                               | Linux: TShark 4.x + prlimit; [capture guide](../guides/data/packet-captures.md)                                                                                  |
-| Packet summaries       | Endpoints, DNS, TLS SNI, protocol distribution, HTTP requests                               | Caller നൽകുന്ന tshark, capinfos (Linux-ൽ പരിശോധിച്ചത്); [pcap guide](../guides/data/pcap-analysis.md)                                                                |
-| Recorded logic signals | Decoder annotations, sample ranges, diagnostics                                             | Linux: sigrok-cli 0.7.2 + prlimit; [signal recordings](../guides/signals/signal-recordings.md)                                                                   |
-| Packages and resources | File inventories, digests, plists, Apple bundle ഘടന, extracted resources                    | [Artifact and JavaScript guide](../guides/javascript/javascript-artifact-reconstruction.md), [Apple applications](../guides/apple/apple-application-analysis.md) |
-| Process behavior       | Terminal output, interactions, exit, filesystem observations, run comparisons               | Native PTY ഉള്ള Linux/macOS; [process capture](../guides/runtime/process-capture.md)                                                                              |
-| GPU code objects       | CUDA/HIP targets, തിരഞ്ഞെടുത്ത kernel parameters/resources, സൂക്ഷിച്ച PTX text                    | ഉൾനിർമിത static പരിശോധന ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                   |
-| Model files            | GGUF / safetensors metadata, tensor declarations, കണക്കാക്കിയ totals                           | Header പരിശോധന; full-file hash ഐച്ഛികം; [GGUF / safetensors](../model-artifacts.md)                                                                               |
-| IL2CPP metadata        | Unity global-metadata.dat assembly images, type/method names, index ranges                  | 24, 27, 29, 31, 39 versions-ന്റെ static decoding; Unity വേണ്ട                                                                                                      |
-| Godot PCK              | Archive inventory/extraction, original header/directory facts, തിരഞ്ഞെടുത്ത content identities | Static formats 2, 3, 4; Godot വേണ്ട                                                                                                                               |
-| APK signatures         | v1/v2/v3/v3.1 signers, certificate fingerprints, key rotation, digest self-consistency      | ഉൾനിർമിത static പരിശോധന; `inspect_apk_signature`                                                                                                                 |
+| Target                 | REA നൽകുന്ന ഫലങ്ങൾ                                                                             | ആവശ്യകതകളും ഗൈഡും                                                                                                                    |
+| ---------------------- | ------------------------------------------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------- |
+| Native binaries        | Pseudocode, assembly, strings, symbols, calls, references                                   | Hopper, Ghidra, IDA അല്ലെങ്കിൽ Kuna; [native analysis](../native-investigation.md)                                                  |
+| Offline ELF layout     | Sections, segments, യഥാർത്ഥ symbols/relocations, static mitigation candidates                 | Linux x64-ൽ caller നൽകുന്ന pwntools; [binary diagnostics](../binary-diagnostics.md)                                                 |
+| Go binaries            | ഉൾച്ചേർത്ത compiler version, modules, replacements, build settings                            | Built-in static ELF/PE/thin Mach-O പരിശോധന; Go installation ആവശ്യമില്ല                                                              |
+| Rust binaries          | ഉൾച്ചേർത്ത cargo-auditable crate പേരുകൾ, versions, sources, dependency edges                   | Built-in static ELF/PE/thin Mach-O പരിശോധന; [Rust binaries](../rust-binaries.md)                                                  |
+| PE certificates        | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                           |
+| PE imports             | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                  | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                     |
+| ELF notes              | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                             | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                      |
+| Binary hardening       | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                         | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                     |
+| Linux kernel modules   | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                 | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                            |
+| Erlang BEAM            | IFF chunks, atoms, exports, and tables                                                      | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                 |
+| WASM artifact          | Validation, sections, കൃത്യമായ import/export WAT രൂപങ്ങൾ, decoded WAT                            | Caller നൽകുന്ന WABT 1.0.42; `inspect_wasm_artifact`                                                                                 |
+| EVM bytecode           | Dispatch selectors, byte offsets, അനുമാനിച്ച arguments, mutability                             | Linux x64-ൽ local raw/hex carrier; [offline EVM guide](../evm-bytecode.md)                                                        |
+| SQLite databases       | Tables, columns, indexes, views, triggers, തിരഞ്ഞെടുത്ത സാധാരണ table rows                        | Local database/WAL snapshot; native SQLite പരിമിതികളോടെ Node.js 24.x >=24.15 അല്ലെങ്കിൽ 26+                                         |
+| Apple IPS crashes      | .ips metadata, threads, images, registers and crash classes                                 | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                     |
+| Recorded Linux crashes | Raw notes, രേഖപ്പെടുത്തിയ ഓരോ thread-ന്റെയും registers/signals, ഐച്ഛിക mapping candidates         | Linux x64-ൽ caller നൽകുന്ന pwntools; ഐച്ഛിക GDB/pwndbg; [recorded crashes](../recorded-crashes.md)                                   |
+| ഡെസ്ക്ടോപ്പ് ഇൻസ്റ്റലേഷനുകൾ   | റൺടൈം സാധ്യതകൾ, തെളിവ് ഫയലുകൾ, ഘടക സൂചനകൾ, തുടർ നടപടികൾ                                           | പരിധിയുള്ള ഡയറക്ടറി, ഹെഡർ പരിശോധന；[ഡെസ്ക്ടോപ്പ് ആപ്ലിക്കേഷനുകൾ](../desktop-applications.md)                                                |
+| JavaScript / Electron  | Modules, imports, source maps, routes, IPC, native add-on ബന്ധങ്ങൾ                            | Node.js, npm; Linux: procps-compatible `ps`; [application analysis](../javascript-application-workflows.md)                       |
+| Websites               | Page structure, scripts, network observations, ആവശ്യപ്പെട്ട screenshots                        | Chrome-family browser; [browser analysis](../browser-observation.md)                                                              |
+| Saved network captures | Requests, responses, പുറത്തുകാണുന്ന payload-ുകൾ, source locations                                  | HAR അല്ലെങ്കിൽ Fiddler Everywhere SAZ; native mitmproxy-നായി Linux-ൽ mitmdump; [capture guide](../web-network-captures.md)           |
+| .NET assemblies        | Metadata, CIL instructions, പ്രഖ്യാപിച്ച native dependencies, build comparisons                 | ഒന്നും ആവശ്യമില്ല (static മാത്രം); [managed-code guide](../managed-code-analysis.md)                                                    |
+| Python packaged apps   | CArchive/PYZ entries, Python version, bytecode, resources and runtime options               | Static PyInstaller parsing; [Python guide](../python-packaged-applications.md)                                                    |
+| Android APKs           | Manifest declarations, classes, decompiled methods, references                              | Linux/macOS/Windows x64-ൽ Headless JADX-ഉം full JDK-ഉം; [Android guide](../android-analysis.md)                                   |
+| Android devices        | Devices, packages, processes, logs, dumps, screen captures, APK/file transfers              | Caller നൽകുന്ന adb (emulator അല്ലെങ്കിൽ hardware); [ADB guide](../adb-device-analysis.md)                                             |
+| JEB projects           | Engine-backed project units, artifact digests, type/method pseudo-code                      | MCP സേവനം നൽകുന്ന caller ആരംഭിച്ച JEB client; REA_JEB_MCP_URL ഉപയോഗിച്ച് തിരഞ്ഞെടുക്കുക; [JEB guide](../jeb-analysis.md)                   |
+| Android resources      | Decoded manifest, string tables, locales, version വിവരങ്ങൾ                                   | Caller നൽകുന്ന Apktool launcher; [resource guide](../apktool-resource-analysis.md)                                                  |
+| Flutter apps           | Dart snapshot hash, ഓരോ ABI-യിലെയും library digests, engine build provenance                 | ഒന്നും ആവശ്യമില്ല (static APK parsing); [Flutter guide](../flutter-analysis.md)                                                       |
+| Firmware               | Regions, extraction results, native-analysis handoffs                                       | Linux-ൽ Binwalk / Unblob; [firmware guide](../firmware-analysis.md)                                                               |
+| Recorded packets       | തിരഞ്ഞെടുത്ത fields, ആവർത്തിക്കുന്ന values, filters, decode-as rules                               | Linux: TShark 4.x + prlimit; [capture guide](../packet-captures.md)                                                               |
+| Packet summaries       | Endpoints, DNS, TLS SNI, protocol distribution, HTTP requests                               | Caller നൽകുന്ന tshark, capinfos (Linux-ൽ പരിശോധിച്ചത്); [pcap guide](../pcap-analysis.md)                                             |
+| Recorded logic signals | Decoder annotations, sample ranges, diagnostics                                             | Linux: sigrok-cli 0.7.2 + prlimit; [signal recordings](../signal-recordings.md)                                                   |
+| Packages and resources | File inventories, digests, plists, Apple bundle ഘടന, extracted resources                    | [Artifact and JavaScript guide](../javascript-artifact-reconstruction.md), [Apple applications](../apple-application-analysis.md) |
+| Process behavior       | Terminal output, interactions, exit, filesystem observations, run comparisons               | Native PTY ഉള്ള Linux/macOS; [process capture](../process-capture.md)                                                              |
+| GPU code objects       | CUDA/HIP targets, തിരഞ്ഞെടുത്ത kernel parameters/resources, സൂക്ഷിച്ച PTX text                    | ഉൾനിർമിത static പരിശോധന ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                    |
+| Model files            | GGUF / safetensors metadata, tensor declarations, കണക്കാക്കിയ totals                           | Header പരിശോധന; full-file hash ഐച്ഛികം; [GGUF / safetensors](../model-artifacts.md)                                                |
+| IL2CPP metadata        | Unity global-metadata.dat assembly images, type/method names, index ranges                  | 24, 27, 29, 31, 39 versions-ന്റെ static decoding; Unity വേണ്ട                                                                       |
+| Godot PCK              | Archive inventory/extraction, original header/directory facts, തിരഞ്ഞെടുത്ത content identities | Static formats 2, 3, 4; Godot വേണ്ട                                                                                                |
+| APK signatures         | v1/v2/v3/v3.1 signers, certificate fingerprints, key rotation, digest self-consistency      | ഉൾനിർമിത static പരിശോധന; `inspect_apk_signature`                                                                                  |
 
 Static JavaScript, .NET പരിശോധനകൾ application പ്രവർത്തിപ്പിക്കാതെ നൽകിയ files വായിച്ചാണ് നടത്തുന്നത്. Runtime capture, നിങ്ങളുടെ user permissions ഉപയോഗിച്ച് തിരഞ്ഞെടുത്ത target പ്രവർത്തിപ്പിക്കുകയോ അതുമായി ഇടപെടുകയോ ചെയ്യുന്നു; ഓരോ runtime guide-ലും അതിന്റെ പ്രത്യാഘാതങ്ങൾ വിശദീകരിച്ചിട്ടുണ്ട്.
 
@@ -197,11 +197,11 @@ Offline native-binary പരിശോധനയ്ക്കായി REA, caller
 
 <a id="choosing-a-deep-analysis-provider"></a>
 
-Native formats-ഉം host support-ഉം provider അനുസരിച്ച് വ്യത്യാസപ്പെടും. [Hopper and Ghidra setup](../getting-started/installation.md#hopper), [IDA guide](../providers/ida-provider.md) (ഐച്ഛിക native MCP bridge ഉൾപ്പെടെ), [Kuna decompiler guide](../kuna-provider.md), [പരീക്ഷണഘട്ടത്തിലുള്ള Windows Ghidra support](../providers/windows-ghidra-p0.md) എന്നിവ കാണുക.
-Ghidra, [16-bit DOS analysis](../providers/ghidra-dos.md)-ഉം പിന്തുണയ്ക്കുന്നു.
+Native formats-ഉം host support-ഉം provider അനുസരിച്ച് വ്യത്യാസപ്പെടും. [Hopper and Ghidra setup](../installation.md#hopper), [IDA guide](../ida-provider.md) (ഐച്ഛിക native MCP bridge ഉൾപ്പെടെ), [Kuna decompiler guide](../kuna-provider.md), [പരീക്ഷണഘട്ടത്തിലുള്ള Windows Ghidra support](../windows-ghidra-p0.md) എന്നിവ കാണുക.
+Ghidra, [16-bit DOS analysis](../ghidra-dos.md)-ഉം പിന്തുണയ്ക്കുന്നു.
 വലിയ binaries-നായി `REA_GHIDRA_STARTUP_TIMEOUT_MS` അല്ലെങ്കിൽ `REA_HOPPER_STARTUP_TIMEOUT_MS` ഉപയോഗിച്ച് provider-ന്റെ startup deadline വർധിപ്പിക്കുക.
-Provider തിരഞ്ഞെടുക്കാൻ [CLI guide](../getting-started/cli.md#choose-a-provider) കാണുക.
-ഏറ്റവും പുതിയ npm release-നുശേഷം ചേർത്ത features അറിയാൻ [release availability](../getting-started/installation.md#released-package-and-main) പരിശോധിക്കുക.
+Provider തിരഞ്ഞെടുക്കാൻ [CLI guide](../cli.md#choose-a-provider) കാണുക.
+ഏറ്റവും പുതിയ npm release-നുശേഷം ചേർത്ത features അറിയാൻ [release availability](../installation.md#released-package-and-main) പരിശോധിക്കുക.
 
 ## ഉദാഹരണങ്ങൾ
 
@@ -282,28 +282,28 @@ agent-env run ./my-env
 <details>
 <summary><strong>ഏതൊക്കെ agents-ന് REA ഉപയോഗിക്കാം?</strong></summary>
 
-Local MCP servers പിന്തുണയ്ക്കുന്ന ഏത് agent-നും REA ഉപയോഗിക്കാം. Setup, [പിന്തുണയ്ക്കുന്ന agents](../getting-started/installation.md#supported-agents) ക്രമീകരിക്കുന്നു; മറ്റ് clients-ന് [manual MCP registration](../getting-started/installation.md#mcp-registry) ഉപയോഗിക്കാം.
+Local MCP servers പിന്തുണയ്ക്കുന്ന ഏത് agent-നും REA ഉപയോഗിക്കാം. Setup, [പിന്തുണയ്ക്കുന്ന agents](../installation.md#supported-agents) ക്രമീകരിക്കുന്നു; മറ്റ് clients-ന് [manual MCP registration](../installation.md#mcp-registry) ഉപയോഗിക്കാം.
 
 </details>
 
 <details>
 <summary><strong>Hopper, Ghidra, IDA അല്ലെങ്കിൽ Kuna ആവശ്യമാണോ?</strong></summary>
 
-ആഴത്തിലുള്ള native analysis-ന് ഇവയിൽ ഒന്ന് ആവശ്യമാണ്. Static JavaScript, .NET പരിശോധനകൾ native analysis engine ഇല്ലാതെയും പ്രവർത്തിക്കും. അനുമതി ലഭിച്ചാൽ setup-ന് Hopper ഇൻസ്റ്റാൾ ചെയ്യാം; Ghidra, IDA, Kuna എന്നിവയ്ക്കായി നിങ്ങളുടെ നിലവിലുള്ള installations ഉപയോഗിക്കുന്നു. [Provider setup](../getting-started/installation.md#hopper) കാണുക.
+ആഴത്തിലുള്ള native analysis-ന് ഇവയിൽ ഒന്ന് ആവശ്യമാണ്. Static JavaScript, .NET പരിശോധനകൾ native analysis engine ഇല്ലാതെയും പ്രവർത്തിക്കും. അനുമതി ലഭിച്ചാൽ setup-ന് Hopper ഇൻസ്റ്റാൾ ചെയ്യാം; Ghidra, IDA, Kuna എന്നിവയ്ക്കായി നിങ്ങളുടെ നിലവിലുള്ള installations ഉപയോഗിക്കുന്നു. [Provider setup](../installation.md#hopper) കാണുക.
 
 </details>
 
 <details>
 <summary><strong>Hopper ആദ്യം ആരംഭിക്കേണ്ടതുണ്ടോ?</strong></summary>
 
-ഒരു operation-ന് ആവശ്യമാകുമ്പോൾ REA Hopper ആരംഭിക്കും. macOS-ൽ ആദ്യമായി പ്രവർത്തിപ്പിക്കുമ്പോൾ demo mode തിരഞ്ഞെടുക്കാനോ license activate ചെയ്യാനോ ആവശ്യപ്പെടുന്ന dialog പ്രത്യക്ഷപ്പെടാം. ആദ്യ CLI/MCP operation അല്ലെങ്കിൽ unattended job നടത്തുന്നതിന് മുമ്പ് അതേ user session-ൽ ആ prompt പൂർത്തിയാക്കുക. ആവശ്യമെങ്കിൽ Hopper സ്വമേധയാ തുറക്കുക. [Hopper startup and troubleshooting](../getting-started/installation.md#launcher-paths-and-troubleshooting) കാണുക.
+ഒരു operation-ന് ആവശ്യമാകുമ്പോൾ REA Hopper ആരംഭിക്കും. macOS-ൽ ആദ്യമായി പ്രവർത്തിപ്പിക്കുമ്പോൾ demo mode തിരഞ്ഞെടുക്കാനോ license activate ചെയ്യാനോ ആവശ്യപ്പെടുന്ന dialog പ്രത്യക്ഷപ്പെടാം. ആദ്യ CLI/MCP operation അല്ലെങ്കിൽ unattended job നടത്തുന്നതിന് മുമ്പ് അതേ user session-ൽ ആ prompt പൂർത്തിയാക്കുക. ആവശ്യമെങ്കിൽ Hopper സ്വമേധയാ തുറക്കുക. [Hopper startup and troubleshooting](../installation.md#launcher-paths-and-troubleshooting) കാണുക.
 
 </details>
 
 <details>
 <summary><strong>skills.sh-ൽ നിന്ന് skill ഇൻസ്റ്റാൾ ചെയ്യുന്നത് എന്താണ് ചെയ്യുന്നത്?</strong></summary>
 
-ഈ skill നിങ്ങളുടെ agent-ന് അന്വേഷണ നിർദ്ദേശങ്ങൾ നൽകുന്നു. REA-യുടെ MCP server രജിസ്റ്റർ ചെയ്യാനും അനുയോജ്യമായ നിർദ്ദേശങ്ങൾ ഇൻസ്റ്റാൾ ചെയ്യാനും `npx rea-agents setup` ഉപയോഗിക്കുക; തുടർന്ന് നിങ്ങളുടെ agent വീണ്ടും ആരംഭിക്കുക. [Skill-only installation](../getting-started/installation.md#skill-only-installation) കാണുക.
+ഈ skill നിങ്ങളുടെ agent-ന് അന്വേഷണ നിർദ്ദേശങ്ങൾ നൽകുന്നു. REA-യുടെ MCP server രജിസ്റ്റർ ചെയ്യാനും അനുയോജ്യമായ നിർദ്ദേശങ്ങൾ ഇൻസ്റ്റാൾ ചെയ്യാനും `npx rea-agents setup` ഉപയോഗിക്കുക; തുടർന്ന് നിങ്ങളുടെ agent വീണ്ടും ആരംഭിക്കുക. [Skill-only installation](../installation.md#skill-only-installation) കാണുക.
 
 </details>
 
@@ -347,12 +347,12 @@ npx rea-agents@latest setup
 വെബ്സൈറ്റിലെ [പ്രായോഗിക ഗൈഡുകൾ](https://rea.tools/guides/) ഉപയോഗിച്ച് തുടങ്ങുക.
 കൃത്യമായ options, prerequisites, result contracts എന്നിവയ്ക്കായി:
 
-- [Installation and setup](../getting-started/installation.md): agent registration, provider configuration, updates, uninstall.
-- [Readiness and troubleshooting](../getting-started/installation.md#check-readiness-for-your-task): ഒരു agent-ന്റെയോ analysis engine-ന്റെയോ പ്രശ്നങ്ങൾ കണ്ടെത്തുക.
-- [CLI and Evidence](../getting-started/cli.md): commands, provider തിരഞ്ഞെടുക്കൽ, snapshots, import/export, exit statuses.
-- [MCP contracts](../reference/mcp-contracts.md), [agent prompts](../getting-started/mcp-prompts.md): tool results, sessions, guided investigations.
-- [Tool catalog](../reference/mcp-contracts.md#generated-catalog): tools, providers, CLI commands എന്നിവയുടെ സ്വയമേവ സൃഷ്ടിച്ച പട്ടിക.
-- [Roadmap](../development/roadmap.md): ആസൂത്രണം ചെയ്ത പ്രവർത്തനങ്ങളും capability trackers-ഉം.
+- [Installation and setup](../installation.md): agent registration, provider configuration, updates, uninstall.
+- [Readiness and troubleshooting](../installation.md#check-readiness-for-your-task): ഒരു agent-ന്റെയോ analysis engine-ന്റെയോ പ്രശ്നങ്ങൾ കണ്ടെത്തുക.
+- [CLI and Evidence](../cli.md): commands, provider തിരഞ്ഞെടുക്കൽ, snapshots, import/export, exit statuses.
+- [MCP contracts](../mcp-contracts.md), [agent prompts](../mcp-prompts.md): tool results, sessions, guided investigations.
+- [Tool catalog](../mcp-contracts.md#generated-catalog): tools, providers, CLI commands എന്നിവയുടെ സ്വയമേവ സൃഷ്ടിച്ച പട്ടിക.
+- [Roadmap](../roadmap.md): ആസൂത്രണം ചെയ്ത പ്രവർത്തനങ്ങളും capability trackers-ഉം.
 
 സുരക്ഷാ ദുർബലതകൾ [SECURITY.md](../../SECURITY.md) വഴി റിപ്പോർട്ട് ചെയ്യുക.
 
@@ -382,7 +382,7 @@ REA ഉപയോഗിക്കുന്നവർക്കും, bugs റിപ
 
 REA-യ്ക്കായി നിങ്ങളുടെ സഹായം ഞങ്ങൾ സ്വാഗതം ചെയ്യുന്നു! bug റിപ്പോർട്ട് ചെയ്യാനോ feature നിർദ്ദേശിക്കാനോ [issue തുറക്കുക](https://github.com/morluto/rea/issues), code അല്ലെങ്കിൽ docs മെച്ചപ്പെടുത്താൻ [pull request അയയ്ക്കുക](https://github.com/morluto/rea/pulls).
 
-Development setup-നും checks-നും [CONTRIBUTING.md](../../CONTRIBUTING.md), verification lanes-നായി [testing](../development/testing.md), project ഘടനയ്ക്കായി [architecture map](../architecture/architecture.mermaid) എന്നിവ കാണുക.
+Development setup-നും checks-നും [CONTRIBUTING.md](../../CONTRIBUTING.md), verification lanes-നായി [testing](../testing.md), project ഘടനയ്ക്കായി [architecture map](../architecture.mermaid) എന്നിവ കാണുക.
 
 ## ലൈസൻസ്
 

docs/readme/README_pl.md

@@ -10,7 +10,7 @@
 **Widzisz funkcję, która Ci się podoba? Dowiedz się, jak działa, aż do poziomu kodu binarnego.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Wybierz swoich agentów, sprawdź proponowane zmiany i zatwierdź je. Konfigurator dodaje serwer MCP REA i pasujące instrukcje pracy, tworząc kopie zapasowe istniejącej konfiguracji. Następnie uruchom agenta ponownie.
 
-Konfigurator obsługuje Claude Code, Codex, Cursor, Gemini CLI, Grok Build i [innych agentów](../getting-started/installation.md#supported-agents). Konfigurację dostawców analizy i ręczną rejestrację MCP opisuje przewodnik [instalacji i konfiguracji](../getting-started/installation.md).
+Konfigurator obsługuje Claude Code, Codex, Cursor, Gemini CLI, Grok Build i [innych agentów](../installation.md#supported-agents). Konfigurację dostawców analizy i ręczną rejestrację MCP opisuje przewodnik [instalacji i konfiguracji](../installation.md).
 
 MCP domyślnie używa zwartych schematów wejściowych. Pełne opisy pól i zagnieżdżonej walidacji włącza `REA_MCP_INPUT_SCHEMA_PROFILE=full` w rejestracji MCP. Oba profile zachowują wszystkie narzędzia i tę samą kanoniczną walidację serwera; zobacz przewodnik kontraktów MCP.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Przed analizą kodu natywnego skonfiguruj dostawcę analizy. Polecenia analizy natywnej, wybór dostawcy, migawki i użycie w skryptach opisuje [przewodnik CLI i Evidence](../getting-started/cli.md).
+Przed analizą kodu natywnego skonfiguruj dostawcę analizy. Polecenia analizy natywnej, wybór dostawcy, migawki i użycie w skryptach opisuje [przewodnik CLI i Evidence](../cli.md).
 
 ### Zaktualizuj REA
 
@@ -151,45 +151,45 @@ Twój agent wywołuje REA przez MCP, aby analizować cel i śledzić istotny kod
 
 REA wymaga Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) lub 26+ (>=26.12.1) oraz npm. Dodatkowe narzędzia i obsługiwane platformy zależą od celu analizy:
 
-| Cel                                     | Co zwraca REA                                                                                                         | Wymagania i przewodnik                                                                                                                                             |
-| --------------------------------------- | --------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
-| Natywne pliki binarne                   | Pseudokod, kod asemblera, ciągi znaków, symbole, wywołania i odwołania                                                | Hopper, Ghidra, IDA lub Kuna; [analiza kodu natywnego](../guides/native/native-investigation.md)                                                                   |
-| Układ pliku ELF w trybie offline        | Sekcje, segmenty, oryginalne symbole/relokacje i potencjalne mechanizmy zabezpieczeń wskazane przez analizę statyczną | pwntools dostarczone przez użytkownika w systemie Linux x64; [diagnostyka plików binarnych](../guides/native/binary-diagnostics.md)                                |
-| PE certificates                         | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                          | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                            |
-| PE imports                              | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                            | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                      |
-| Kod bajtowy EVM                         | Selektory wywołań, przesunięcia bajtowe, wywnioskowane argumenty i mutowalność                                        | Lokalny plik z surowymi bajtami lub zapisem szesnastkowym w systemie Linux x64; [przewodnik EVM offline](../guides/evm/evm-bytecode.md)                            |
-| Rust binaries                           | Embedded cargo-auditable dependency list                                                                              | [Rust binaries](../rust-binaries.md)                                                                                                                               |
-| ELF notes                               | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                       | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                       |
-| Binary hardening                        | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                   | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                      |
-| Linux kernel modules                    | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                           | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                             |
-| Erlang BEAM                             | IFF chunks, atoms, exports, and tables                                                                                | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                  |
-| Apple IPS crashes                       | .ips metadata, threads, images, registers and crash classes                                                           | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                      |
-| Zarejestrowane awarie systemu Linux     | Surowe rekordy note, rejestry/sygnały każdego zarejestrowanego wątku i opcjonalni kandydaci na mapowania              | pwntools dostarczone przez użytkownika w systemie Linux x64; opcjonalnie GDB/pwndbg; [zarejestrowane awarie](../guides/native/recorded-crashes.md)                 |
-| Instalacje desktopowe                   | Kandydaci środowisk uruchomieniowych, pliki źródłowe dowodów, komponenty i dalsze kroki                               | Ograniczona inspekcja katalogów i nagłówków；[Aplikacje desktopowe](../desktop-applications.md)                                                                    |
-| JavaScript / Electron                   | Moduły, importy, mapy źródeł, trasy, IPC i powiązania z natywnymi dodatkami                                           | Node.js i npm; [analiza aplikacji](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                                   |
-| Strony internetowe                      | Struktura strony, skrypty, obserwacje sieciowe i zamówione zrzuty ekranu                                              | Przeglądarka z rodziny Chrome; [analiza w przeglądarce](../guides/web/browser-observation.md)                                                                      |
-| Zapisane przechwycenia ruchu sieciowego | Żądania, odpowiedzi, dostępne dane przesyłane i lokalizacje źródłowe                                                  | HAR / Fiddler Everywhere SAZ; mitmdump w systemie Linux dla natywnych przechwyceń mitmproxy; [przewodnik przechwytywania](../guides/web/web-network-captures.md)   |
-| Przechwytywanie pakietów                | Punkty końcowe, DNS, TLS SNI, dystrybucja protokołów i żądania HTTP                                                   | Dostarczone przez wywołującego tshark i capinfos; [przewodnik pcap](../guides/data/pcap-analysis.md)                                                               |
-| Zestawy .NET                            | Metadane, instrukcje CIL, zadeklarowane zależności natywne i porównania kompilacji                                    | Analiza statyczna; [przewodnik kodu zarządzanego](../guides/managed/managed-code-analysis.md)                                                                      |
-| PyInstaller                             | CArchive, PYZ, Python bytecode                                                                                        | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                              |
-| Pakiety APK dla Androida                | Deklaracje manifestu, klasy, zdekompilowane metody i odwołania                                                        | JADX bez interfejsu graficznego i pełny JDK w systemach Linux/macOS/Windows x64; [przewodnik Androida](../guides/android/android-analysis.md)                      |
-| Urządzenia z Androidem                  | Urządzenia, pakiety, procesy, logi, zrzuty, zrzuty ekranu oraz transfery APK/plików                                   | adb dostarczony przez wywołującego (emulator lub urządzenie); [przewodnik ADB](../guides/android/adb-device-analysis.md)                                           |
-| Projekty JEB                            | Jednostki projektu obsługiwane przez silnik, skróty artefaktów i pseudokod typów/metod                                | Uruchomiony przez wywołującego klient JEB udostępniający MCP, wybrany przez REA_JEB_MCP_URL; [przewodnik JEB](../providers/jeb-analysis.md)                        |
-| Zasoby Androida                         | Zdekodowany manifest, tablice ciągów, języki i informacje o wersji                                                    | Należący do wywołującego launcher Apktool; [przewodnik zasobów](../guides/android/apktool-resource-analysis.md)                                                    |
-| Aplikacje Flutter                       | Hash migawki Dart, sumy bibliotek per ABI i pochodzenie kompilacji silnika                                            | Brak (statyczna analiza APK); [przewodnik Flutter](../guides/android/flutter-analysis.md)                                                                          |
-| Oprogramowanie układowe                 | Regiony, wyniki wyodrębniania i przekazanie do analizy kodu natywnego                                                 | Binwalk / Unblob w systemie Linux; [przewodnik oprogramowania układowego](../guides/firmware/firmware-analysis.md)                                                 |
-| Zapisane pakiety                        | Wybrane pola, powtarzane wartości, filtry i reguły dekodowania                                                        | Linux: TShark 4.x + prlimit; [przewodnik po przechwyconych pakietach](../guides/data/packet-captures.md)                                                           |
-| Zapisane sygnały logiczne               | Adnotacje dekodera, zakresy próbek i diagnostyka                                                                      | Linux: sigrok-cli 0.7.2 + prlimit; [przewodnik po sygnałach](../guides/signals/signal-recordings.md)                                                               |
-| Pakiety i zasoby                        | Spisy plików, skróty, pliki plist, struktura pakietów Apple i wyodrębnione zasoby                                     | [Przewodnik artefaktów i JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [aplikacje Apple](../guides/apple/apple-application-analysis.md) |
-| Zachowanie procesów                     | Wyjście terminala, interakcje, obserwacje zakończenia i systemu plików oraz porównania uruchomień                     | Linux/macOS z natywnym PTY; [przechwytywanie procesów](../guides/runtime/process-capture.md)                                                                       |
-| Pliki binarne Go                        | Wbudowana wersja kompilatora, moduły, zamienniki i ustawienia kompilacji                                              | Wbudowana analiza statyczna ELF/PE/thin Mach-O; Instalacja Go nie jest wymagana                                                                                    |
-| Bazy SQLite                             | Tabele, kolumny, indeksy, widoki, wyzwalacze i wybrane wiersze zwykłych tabel                                         | Lokalna migawka bazy/WAL; Node.js 24.x >=24.15 lub 26+ z natywnymi limitami SQLite                                                                                 |
-| Obiekty kodu GPU                        | Cele CUDA/HIP, parametry i zasoby wybranych kerneli, zachowany tekst PTX                                              | Wbudowana analiza statyczna ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                                 |
-| Pliki modeli                            | Metadane GGUF / safetensors, deklaracje tensorów i wyliczone sumy                                                     | Odczyt nagłówków; opcjonalny hash całego pliku; [GGUF / safetensors](../model-artifacts.md)                                                                        |
-| Metadane IL2CPP                         | Obrazy zestawów Unity global-metadata.dat, nazwy typów/metod i zakresy indeksów                                       | Statyczne dekodowanie wersji 24, 27, 29, 31, 39; bez Unity                                                                                                         |
-| Godot PCK                               | Spis i rozpakowanie archiwum, oryginalne nagłówki/katalogi i tożsamość wybranej zawartości                            | Formaty statyczne 2, 3, 4; bez Godot                                                                                                                               |
-| Artefakty WASM                          | Walidacja, sekcje, dokładne formy WAT importów/eksportów i zdekodowany WAT                                            | Dostarczone przez użytkownika WABT 1.0.42; `inspect_wasm_artifact`                                                                                                 |
-| Podpisy APK                             | Sygnatariusze v1/v2/v3/v3.1, odciski certyfikatów, rotacja kluczy i wewnętrzna spójność skrótów                       | Wbudowana analiza statyczna; `inspect_apk_signature`                                                                                                               |
+| Cel                                     | Co zwraca REA                                                                                                         | Wymagania i przewodnik                                                                                                                                |
+| --------------------------------------- | --------------------------------------------------------------------------------------------------------------------- | ----------------------------------------------------------------------------------------------------------------------------------------------------- |
+| Natywne pliki binarne                   | Pseudokod, kod asemblera, ciągi znaków, symbole, wywołania i odwołania                                                | Hopper, Ghidra, IDA lub Kuna; [analiza kodu natywnego](../native-investigation.md)                                                                    |
+| Układ pliku ELF w trybie offline        | Sekcje, segmenty, oryginalne symbole/relokacje i potencjalne mechanizmy zabezpieczeń wskazane przez analizę statyczną | pwntools dostarczone przez użytkownika w systemie Linux x64; [diagnostyka plików binarnych](../binary-diagnostics.md)                                 |
+| PE certificates                         | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                          | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                               |
+| PE imports                              | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                            | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                         |
+| Kod bajtowy EVM                         | Selektory wywołań, przesunięcia bajtowe, wywnioskowane argumenty i mutowalność                                        | Lokalny plik z surowymi bajtami lub zapisem szesnastkowym w systemie Linux x64; [przewodnik EVM offline](../evm-bytecode.md)                          |
+| Rust binaries                           | Embedded cargo-auditable dependency list                                                                              | [Rust binaries](../rust-binaries.md)                                                                                                                  |
+| ELF notes                               | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                       | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                          |
+| Binary hardening                        | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                   | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                         |
+| Linux kernel modules                    | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                           | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                |
+| Erlang BEAM                             | IFF chunks, atoms, exports, and tables                                                                                | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                     |
+| Apple IPS crashes                       | .ips metadata, threads, images, registers and crash classes                                                           | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                         |
+| Zarejestrowane awarie systemu Linux     | Surowe rekordy note, rejestry/sygnały każdego zarejestrowanego wątku i opcjonalni kandydaci na mapowania              | pwntools dostarczone przez użytkownika w systemie Linux x64; opcjonalnie GDB/pwndbg; [zarejestrowane awarie](../recorded-crashes.md)                  |
+| Instalacje desktopowe                   | Kandydaci środowisk uruchomieniowych, pliki źródłowe dowodów, komponenty i dalsze kroki                               | Ograniczona inspekcja katalogów i nagłówków；[Aplikacje desktopowe](../desktop-applications.md)                                                       |
+| JavaScript / Electron                   | Moduły, importy, mapy źródeł, trasy, IPC i powiązania z natywnymi dodatkami                                           | Node.js i npm; [analiza aplikacji](../javascript-application-workflows.md); Linux: procps `ps`                                                        |
+| Strony internetowe                      | Struktura strony, skrypty, obserwacje sieciowe i zamówione zrzuty ekranu                                              | Przeglądarka z rodziny Chrome; [analiza w przeglądarce](../browser-observation.md)                                                                    |
+| Zapisane przechwycenia ruchu sieciowego | Żądania, odpowiedzi, dostępne dane przesyłane i lokalizacje źródłowe                                                  | HAR / Fiddler Everywhere SAZ; mitmdump w systemie Linux dla natywnych przechwyceń mitmproxy; [przewodnik przechwytywania](../web-network-captures.md) |
+| Przechwytywanie pakietów                | Punkty końcowe, DNS, TLS SNI, dystrybucja protokołów i żądania HTTP                                                   | Dostarczone przez wywołującego tshark i capinfos; [przewodnik pcap](../pcap-analysis.md)                                                              |
+| Zestawy .NET                            | Metadane, instrukcje CIL, zadeklarowane zależności natywne i porównania kompilacji                                    | Analiza statyczna; [przewodnik kodu zarządzanego](../managed-code-analysis.md)                                                                        |
+| PyInstaller                             | CArchive, PYZ, Python bytecode                                                                                        | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                 |
+| Pakiety APK dla Androida                | Deklaracje manifestu, klasy, zdekompilowane metody i odwołania                                                        | JADX bez interfejsu graficznego i pełny JDK w systemach Linux/macOS/Windows x64; [przewodnik Androida](../android-analysis.md)                        |
+| Urządzenia z Androidem                  | Urządzenia, pakiety, procesy, logi, zrzuty, zrzuty ekranu oraz transfery APK/plików                                   | adb dostarczony przez wywołującego (emulator lub urządzenie); [przewodnik ADB](../adb-device-analysis.md)                                             |
+| Projekty JEB                            | Jednostki projektu obsługiwane przez silnik, skróty artefaktów i pseudokod typów/metod                                | Uruchomiony przez wywołującego klient JEB udostępniający MCP, wybrany przez REA_JEB_MCP_URL; [przewodnik JEB](../jeb-analysis.md)                     |
+| Zasoby Androida                         | Zdekodowany manifest, tablice ciągów, języki i informacje o wersji                                                    | Należący do wywołującego launcher Apktool; [przewodnik zasobów](../apktool-resource-analysis.md)                                                      |
+| Aplikacje Flutter                       | Hash migawki Dart, sumy bibliotek per ABI i pochodzenie kompilacji silnika                                            | Brak (statyczna analiza APK); [przewodnik Flutter](../flutter-analysis.md)                                                                            |
+| Oprogramowanie układowe                 | Regiony, wyniki wyodrębniania i przekazanie do analizy kodu natywnego                                                 | Binwalk / Unblob w systemie Linux; [przewodnik oprogramowania układowego](../firmware-analysis.md)                                                    |
+| Zapisane pakiety                        | Wybrane pola, powtarzane wartości, filtry i reguły dekodowania                                                        | Linux: TShark 4.x + prlimit; [przewodnik po przechwyconych pakietach](../packet-captures.md)                                                          |
+| Zapisane sygnały logiczne               | Adnotacje dekodera, zakresy próbek i diagnostyka                                                                      | Linux: sigrok-cli 0.7.2 + prlimit; [przewodnik po sygnałach](../signal-recordings.md)                                                                 |
+| Pakiety i zasoby                        | Spisy plików, skróty, pliki plist, struktura pakietów Apple i wyodrębnione zasoby                                     | [Przewodnik artefaktów i JavaScript](../javascript-artifact-reconstruction.md), [aplikacje Apple](../apple-application-analysis.md)                   |
+| Zachowanie procesów                     | Wyjście terminala, interakcje, obserwacje zakończenia i systemu plików oraz porównania uruchomień                     | Linux/macOS z natywnym PTY; [przechwytywanie procesów](../process-capture.md)                                                                         |
+| Pliki binarne Go                        | Wbudowana wersja kompilatora, moduły, zamienniki i ustawienia kompilacji                                              | Wbudowana analiza statyczna ELF/PE/thin Mach-O; Instalacja Go nie jest wymagana                                                                       |
+| Bazy SQLite                             | Tabele, kolumny, indeksy, widoki, wyzwalacze i wybrane wiersze zwykłych tabel                                         | Lokalna migawka bazy/WAL; Node.js 24.x >=24.15 lub 26+ z natywnymi limitami SQLite                                                                    |
+| Obiekty kodu GPU                        | Cele CUDA/HIP, parametry i zasoby wybranych kerneli, zachowany tekst PTX                                              | Wbudowana analiza statyczna ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                    |
+| Pliki modeli                            | Metadane GGUF / safetensors, deklaracje tensorów i wyliczone sumy                                                     | Odczyt nagłówków; opcjonalny hash całego pliku; [GGUF / safetensors](../model-artifacts.md)                                                           |
+| Metadane IL2CPP                         | Obrazy zestawów Unity global-metadata.dat, nazwy typów/metod i zakresy indeksów                                       | Statyczne dekodowanie wersji 24, 27, 29, 31, 39; bez Unity                                                                                            |
+| Godot PCK                               | Spis i rozpakowanie archiwum, oryginalne nagłówki/katalogi i tożsamość wybranej zawartości                            | Formaty statyczne 2, 3, 4; bez Godot                                                                                                                  |
+| Artefakty WASM                          | Walidacja, sekcje, dokładne formy WAT importów/eksportów i zdekodowany WAT                                            | Dostarczone przez użytkownika WABT 1.0.42; `inspect_wasm_artifact`                                                                                    |
+| Podpisy APK                             | Sygnatariusze v1/v2/v3/v3.1, odciski certyfikatów, rotacja kluczy i wewnętrzna spójność skrótów                       | Wbudowana analiza statyczna; `inspect_apk_signature`                                                                                                  |
 
 Statyczna analiza JavaScript i .NET odczytuje dostarczone pliki bez uruchamiania aplikacji. Przechwytywanie w czasie wykonywania uruchamia wybrany cel lub wchodzi z nim w interakcje z uprawnieniami Twojego użytkownika; skutki opisano w odpowiednich przewodnikach.
 
@@ -199,7 +199,7 @@ Do analizy offline natywnych plików binarnych REA obsługuje również GNU objd
 
 Dla dużych plików zwiększ czas uruchomienia przez `REA_GHIDRA_STARTUP_TIMEOUT_MS` lub `REA_HOPPER_STARTUP_TIMEOUT_MS`.
 
-Obsługiwane formaty natywne i platformy zależą od dostawcy analizy. Zobacz [konfigurację Hoppera i Ghidry](../getting-started/installation.md#hopper), [przewodnik IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md) oraz [eksperymentalną obsługę Ghidry w systemie Windows](../providers/windows-ghidra-p0.md). Ghidra obsługuje też [analizę 16-bitowego DOS-a](../providers/ghidra-dos.md). Wybór dostawcy opisuje [przewodnik CLI](../getting-started/cli.md#choose-a-provider). Sprawdź [dostępność w wydaniach](../getting-started/installation.md#released-package-and-main) dla funkcji dodanych po najnowszym wydaniu npm.
+Obsługiwane formaty natywne i platformy zależą od dostawcy analizy. Zobacz [konfigurację Hoppera i Ghidry](../installation.md#hopper), [przewodnik IDA](../ida-provider.md), [Kuna](../kuna-provider.md) oraz [eksperymentalną obsługę Ghidry w systemie Windows](../windows-ghidra-p0.md). Ghidra obsługuje też [analizę 16-bitowego DOS-a](../ghidra-dos.md). Wybór dostawcy opisuje [przewodnik CLI](../cli.md#choose-a-provider). Sprawdź [dostępność w wydaniach](../installation.md#released-package-and-main) dla funkcji dodanych po najnowszym wydaniu npm.
 
 ## Przykłady zastosowań
 
@@ -278,28 +278,28 @@ REA eksportuje gotowe do uruchomienia środowisko z podstawowym testem uruchamia
 <details>
 <summary><strong>Którzy agenci mogą korzystać z REA?</strong></summary>
 
-Każdy agent obsługujący lokalne serwery MCP. Konfigurator konfiguruje [obsługiwanych agentów](../getting-started/installation.md#supported-agents); inne klienty mogą użyć [ręcznej rejestracji MCP](../getting-started/installation.md#mcp-registry).
+Każdy agent obsługujący lokalne serwery MCP. Konfigurator konfiguruje [obsługiwanych agentów](../installation.md#supported-agents); inne klienty mogą użyć [ręcznej rejestracji MCP](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>Czy potrzebuję Hoppera, Ghidry, IDA lub Kuna?</strong></summary>
 
-Dogłębna analiza kodu natywnego używa jednego z nich. Statyczna analiza JavaScript i .NET działa bez silnika analizy natywnej. Konfigurator może zainstalować Hoppera po uzyskaniu zgody; Ghidra, IDA i Kuna korzystają z istniejących instalacji. Zobacz [konfigurację dostawców analizy](../getting-started/installation.md#hopper).
+Dogłębna analiza kodu natywnego używa jednego z nich. Statyczna analiza JavaScript i .NET działa bez silnika analizy natywnej. Konfigurator może zainstalować Hoppera po uzyskaniu zgody; Ghidra, IDA i Kuna korzystają z istniejących instalacji. Zobacz [konfigurację dostawców analizy](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Czy muszę najpierw uruchomić Hoppera?</strong></summary>
 
-REA uruchamia Hoppera, gdy wymaga tego operacja. W systemie macOS przy pierwszym uruchomieniu okno dialogowe może poprosić o wybór trybu demonstracyjnego lub aktywację licencji. Zobacz [uruchamianie Hoppera i rozwiązywanie problemów](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+REA uruchamia Hoppera, gdy wymaga tego operacja. W systemie macOS przy pierwszym uruchomieniu okno dialogowe może poprosić o wybór trybu demonstracyjnego lub aktywację licencji. Zobacz [uruchamianie Hoppera i rozwiązywanie problemów](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>Co daje zainstalowanie umiejętności z skills.sh?</strong></summary>
 
-Umiejętność dostarcza agentowi instrukcje prowadzenia analizy. Użyj `npx rea-agents setup`, aby zarejestrować serwer MCP REA i zainstalować pasujące instrukcje, a następnie uruchom agenta ponownie. Zobacz [instalację samej umiejętności](../getting-started/installation.md#skill-only-installation).
+Umiejętność dostarcza agentowi instrukcje prowadzenia analizy. Użyj `npx rea-agents setup`, aby zarejestrować serwer MCP REA i zainstalować pasujące instrukcje, a następnie uruchom agenta ponownie. Zobacz [instalację samej umiejętności](../installation.md#skill-only-installation).
 
 </details>
 
@@ -342,12 +342,12 @@ Jeśli używasz agenta, wykonaj [odświeżenie konfiguracji](#zaktualizuj-rea) i
 
 Zacznij od [przewodników z przykładami](https://rea.tools/pl/guides/) na stronie internetowej. Dokładne opcje, wymagania wstępne i kontrakty wyników opisano tutaj:
 
-- [Instalacja i konfiguracja](../getting-started/installation.md): rejestracja agentów, konfiguracja dostawców analizy, aktualizacje i odinstalowanie.
-- [Gotowość i rozwiązywanie problemów](../getting-started/installation.md#check-readiness-for-your-task): diagnostyka jednego agenta lub silnika analizy.
-- [CLI i Evidence](../getting-started/cli.md): polecenia, wybór dostawcy, migawki, import/eksport i kody zakończenia.
-- [Kontrakty MCP](../reference/mcp-contracts.md) i [prompty dla agentów](../getting-started/mcp-prompts.md): wyniki narzędzi, sesje i prowadzone analizy.
-- [Katalog narzędzi](../reference/mcp-contracts.md#generated-catalog): generowany podczas kompilacji wykaz narzędzi, dostawców i poleceń CLI.
-- [Plan rozwoju](../development/roadmap.md): planowane prace i śledzenie funkcjonalności.
+- [Instalacja i konfiguracja](../installation.md): rejestracja agentów, konfiguracja dostawców analizy, aktualizacje i odinstalowanie.
+- [Gotowość i rozwiązywanie problemów](../installation.md#check-readiness-for-your-task): diagnostyka jednego agenta lub silnika analizy.
+- [CLI i Evidence](../cli.md): polecenia, wybór dostawcy, migawki, import/eksport i kody zakończenia.
+- [Kontrakty MCP](../mcp-contracts.md) i [prompty dla agentów](../mcp-prompts.md): wyniki narzędzi, sesje i prowadzone analizy.
+- [Katalog narzędzi](../mcp-contracts.md#generated-catalog): generowany podczas kompilacji wykaz narzędzi, dostawców i poleceń CLI.
+- [Plan rozwoju](../roadmap.md): planowane prace i śledzenie funkcjonalności.
 
 Zgłaszaj podatności zgodnie z [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ applicable licenses.
 
 Chętnie przyjmiemy Twoją pomoc w rozwoju REA! [Otwórz zgłoszenie](https://github.com/morluto/rea/issues), aby poinformować o błędzie lub zaproponować funkcję, albo [wyślij pull request](https://github.com/morluto/rea/pulls) z ulepszeniami kodu lub dokumentacji.
 
-Zobacz [CONTRIBUTING.md](../../CONTRIBUTING.md), aby poznać konfigurację środowiska programistycznego i kontrole, [testowanie](../development/testing.md), aby poznać ścieżki weryfikacji, oraz [mapę architektury](../architecture/architecture.mermaid), aby poznać strukturę projektu.
+Zobacz [CONTRIBUTING.md](../../CONTRIBUTING.md), aby poznać konfigurację środowiska programistycznego i kontrole, [testowanie](../testing.md), aby poznać ścieżki weryfikacji, oraz [mapę architektury](../architecture.mermaid), aby poznać strukturę projektu.
 
 ## Licencja
 

docs/readme/README_pt-BR.md

@@ -10,7 +10,7 @@
 **Viu uma funcionalidade de que gostou? Entenda como ela funciona, até o nível binário.**
 
 [![npm version](https://img.shields.io/npm/v/rea-agents?style=flat-square&color=cb3837)](https://www.npmjs.com/package/rea-agents)
-[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../reference/mcp-contracts.md#generated-catalog)
+[![MCP tool catalog](https://img.shields.io/badge/MCP-tool_catalog-5c4ee5?style=flat-square)](../mcp-contracts.md#generated-catalog)
 [![Node.js requirements](https://img.shields.io/badge/Node.js-requirements-339933?style=flat-square&logo=nodedotjs&logoColor=white)](#current-status)
 [![skills.sh](https://skills.sh/b/morluto/rea?style=flat-square)](https://skills.sh/morluto/rea/reverse-engineer-anything)
 [![MIT license](https://img.shields.io/badge/license-MIT-f4c430?style=flat-square)](../../LICENSE)
@@ -80,7 +80,7 @@ npx rea-agents setup
 
 Escolha seus agentes, revise as alterações propostas e aprove-as. A configuração adiciona o servidor MCP do REA e as instruções de fluxo de trabalho correspondentes, com backups das configurações existentes. Reinicie seu agente depois.
 
-A configuração oferece suporte ao Claude Code, Codex, Cursor, Gemini CLI, Grok Build e [outros agentes](../getting-started/installation.md#supported-agents). Consulte [instalação e configuração](../getting-started/installation.md) para configurar provedores e registrar o MCP manualmente.
+A configuração oferece suporte ao Claude Code, Codex, Cursor, Gemini CLI, Grok Build e [outros agentes](../installation.md#supported-agents). Consulte [instalação e configuração](../installation.md) para configurar provedores e registrar o MCP manualmente.
 
 O MCP usa esquemas de entrada compactos por padrão. Para obter todas as orientações de campos e validação aninhada, defina `REA_MCP_INPUT_SCHEMA_PROFILE=full` no registro MCP. Ambos os perfis mantêm todas as ferramentas e a mesma validação canônica do servidor; veja o guia dos contratos MCP.
 
@@ -109,7 +109,7 @@ npm install --global rea-agents
 rea --help
 ```
 
-Para análise nativa, configure primeiro um provedor. Consulte o [guia de CLI e Evidence](../getting-started/cli.md) para comandos nativos, seleção de provedores, snapshots e uso em scripts.
+Para análise nativa, configure primeiro um provedor. Consulte o [guia de CLI e Evidence](../cli.md) para comandos nativos, seleção de provedores, snapshots e uso em scripts.
 
 ### Atualize o REA
 
@@ -151,45 +151,45 @@ Seu agente chama o REA por MCP para inspecionar o alvo e rastrear o código rele
 
 O REA requer Node.js 22.x (>=22.23.4), 24.x (>=24.22.1) ou 26+ (>=26.12.1), além do npm. As ferramentas adicionais e os sistemas anfitriões compatíveis dependem do alvo:
 
-| Alvo                        | O que o REA retorna                                                                                                     | Requisitos e guia                                                                                                                                                |
-| --------------------------- | ----------------------------------------------------------------------------------------------------------------------- | ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| Binários nativos            | Pseudocódigo, assembly, strings, símbolos, chamadas e referências                                                       | Hopper, Ghidra, IDA ou Kuna; [análise nativa](../guides/native/native-investigation.md)                                                                          |
-| Estrutura ELF sem execução  | Seções, segmentos, símbolos/relocações originais e possíveis mecanismos de mitigação identificados por análise estática | pwntools fornecido pelo chamador no Linux x64; [diagnóstico de binários](../guides/native/binary-diagnostics.md)                                                 |
-| PE certificates             | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                            | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                                          |
-| PE imports                  | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                              | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                                    |
-| Bytecode EVM                | Seletores de despacho, offsets de bytes, argumentos inferidos e mutabilidade                                            | Entrada local com bytes brutos ou representação hexadecimal no Linux x64; [guia de EVM sem execução](../guides/evm/evm-bytecode.md)                              |
-| Rust binaries               | Embedded cargo-auditable dependency list                                                                                | [Rust binaries](../rust-binaries.md)                                                                                                                             |
-| ELF notes                   | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                         | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                                     |
-| Binary hardening            | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                     | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                                    |
-| Linux kernel modules        | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                             | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                                           |
-| Erlang BEAM                 | IFF chunks, atoms, exports, and tables                                                                                  | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                                                |
-| Apple IPS crashes           | .ips metadata, threads, images, registers and crash classes                                                             | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                                    |
-| Falhas do Linux registradas | Registros note brutos, registradores/sinais de cada thread registrada e candidatos opcionais a mapeamentos              | pwntools fornecido pelo chamador no Linux x64; GDB/pwndbg opcionais; [falhas registradas](../guides/native/recorded-crashes.md)                                  |
-| Instalações desktop         | Ambientes candidatos, arquivos de evidência, componentes e próximos passos                                              | Inspeção limitada de diretórios e cabeçalhos；[Aplicações desktop](../desktop-applications.md)                                                                   |
-| JavaScript / Electron       | Módulos, importações, source maps, rotas, IPC e relações com complementos nativos                                       | Node.js e npm; [análise de aplicativos](../guides/javascript/javascript-application-workflows.md); Linux: procps `ps`                                            |
-| Sites                       | Estrutura da página, scripts, observações de rede e capturas de tela solicitadas                                        | Um navegador da família Chrome; [análise do navegador](../guides/web/browser-observation.md)                                                                     |
-| Capturas de rede salvas     | Requisições, respostas, payloads acessíveis e localizações de origem                                                    | HAR / Fiddler Everywhere SAZ; mitmdump no Linux para capturas no formato nativo do mitmproxy; [guia de capturas](../guides/web/web-network-captures.md)          |
-| Capturas de pacotes         | Endpoints, DNS, TLS SNI, distribuição de protocolos e requisições HTTP                                                  | tshark e capinfos fornecidos pelo chamador; [guia pcap](../guides/data/pcap-analysis.md)                                                                         |
-| Assemblies .NET             | Metadados, instruções CIL, dependências nativas declaradas e comparações de builds                                      | Inspeção estática; [guia de código gerenciado](../guides/managed/managed-code-analysis.md)                                                                       |
-| PyInstaller                 | CArchive, PYZ, Python bytecode                                                                                          | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                                            |
-| APKs Android                | Declarações do manifesto, classes, métodos descompilados e referências                                                  | JADX sem interface gráfica e um JDK completo no Linux/macOS/Windows x64; [guia de Android](../guides/android/android-analysis.md)                                |
-| Dispositivos Android        | Dispositivos, pacotes, processos, logs, despejos, capturas de tela e transferências de APK/arquivos                     | adb fornecido pelo chamador (emulador ou aparelho); [guia de ADB](../guides/android/adb-device-analysis.md)                                                      |
-| Projetos JEB                | Unidades de projeto do motor, hashes de artefatos e pseudocódigo de tipos/métodos                                       | Um cliente JEB iniciado pelo chamador servindo MCP, selecionado com REA_JEB_MCP_URL; [guia de JEB](../providers/jeb-analysis.md)                                 |
-| Recursos do Android         | Manifesto decodificado, tabelas de strings, idiomas e fatos de versão                                                   | Lançador do Apktool fornecido pelo chamador; [guia de recursos](../guides/android/apktool-resource-analysis.md)                                                  |
-| Aplicativos Flutter         | Hash de snapshot Dart, hashes de bibliotecas por ABI e procedência de build do motor                                    | Nenhuma (análise estática de APK); [guia Flutter](../guides/android/flutter-analysis.md)                                                                         |
-| Firmware                    | Regiões, resultados de extração e encaminhamentos à análise nativa                                                      | Binwalk / Unblob no Linux; [guia de firmware](../guides/firmware/firmware-analysis.md)                                                                           |
-| Pacotes gravados            | Campos selecionados, valores repetidos, filtros e regras de decodificação                                               | Linux: TShark 4.x + prlimit; [guia de capturas](../guides/data/packet-captures.md)                                                                               |
-| Sinais lógicos gravados     | Anotações do decodificador, intervalos de amostras e diagnósticos                                                       | Linux: sigrok-cli 0.7.2 + prlimit; [guia de sinais](../guides/signals/signal-recordings.md)                                                                      |
-| Pacotes e recursos          | Inventários de arquivos, digests, plists, estrutura de bundles Apple e recursos extraídos                               | [Guia de artefatos e JavaScript](../guides/javascript/javascript-artifact-reconstruction.md), [aplicativos Apple](../guides/apple/apple-application-analysis.md) |
-| Comportamento de processos  | Saída do terminal, interações, observações de encerramento e do sistema de arquivos, e comparações entre execuções      | Linux/macOS com PTY nativo; [captura de processos](../guides/runtime/process-capture.md)                                                                         |
-| Binários Go                 | Versão do compilador embutida, módulos, substituições e configurações de compilação                                     | Inspeção estática integrada ELF/PE/thin Mach-O; Não precisa instalar Go                                                                                          |
-| Bancos SQLite               | Tabelas, colunas, índices, views, gatilhos e linhas selecionadas de tabelas comuns                                      | Snapshot local do banco/WAL; Node.js 24.x >=24.15 ou 26+ com limites nativos do SQLite                                                                           |
-| Objetos de código GPU       | Alvos CUDA/HIP, parâmetros e recursos de kernels selecionados, texto PTX preservado                                     | Inspeção estática integrada ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                                               |
-| Arquivos de modelos         | Metadados GGUF / safetensors, declarações de tensores e totais derivados                                                | Inspeção de cabeçalhos; hash completo opcional; [GGUF / safetensors](../model-artifacts.md)                                                                      |
-| Metadados IL2CPP            | Imagens de assemblies Unity global-metadata.dat, nomes de tipos/métodos e intervalos de índices                         | Decodificação estática das versões 24, 27, 29, 31, 39; sem Unity                                                                                                 |
-| Godot PCK                   | Inventário e extração, cabeçalhos/diretórios originais e identidade do conteúdo selecionado                             | Formatos estáticos 2, 3, 4; sem Godot                                                                                                                            |
-| Artefatos WASM              | Validação, seções, formas WAT exatas de importação/exportação e WAT decodificado                                        | Fornecido pelo usuário WABT 1.0.42; `inspect_wasm_artifact`                                                                                                      |
-| Assinaturas APK             | Signatários v1/v2/v3/v3.1, impressões digitais de certificados, rotação de chaves e consistência interna dos resumos    | Inspeção estática integrada; `inspect_apk_signature`                                                                                                             |
+| Alvo                        | O que o REA retorna                                                                                                     | Requisitos e guia                                                                                                                            |
+| --------------------------- | ----------------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------------- |
+| Binários nativos            | Pseudocódigo, assembly, strings, símbolos, chamadas e referências                                                       | Hopper, Ghidra, IDA ou Kuna; [análise nativa](../native-investigation.md)                                                                    |
+| Estrutura ELF sem execução  | Seções, segmentos, símbolos/relocações originais e possíveis mecanismos de mitigação identificados por análise estática | pwntools fornecido pelo chamador no Linux x64; [diagnóstico de binários](../binary-diagnostics.md)                                           |
+| PE certificates             | Authenticode WIN_CERTIFICATE entries and PKCS#7 signer/X.509 identity fields                                            | Built-in static PE inspection; [PE certificates](../pe-certificates.md)                                                                      |
+| PE imports                  | Import and delay-load DLL names, ordinals, IAT RVAs and pefile import hash                                              | Built-in static PE inspection; [PE imports](../pe-imports.md)                                                                                |
+| Bytecode EVM                | Seletores de despacho, offsets de bytes, argumentos inferidos e mutabilidade                                            | Entrada local com bytes brutos ou representação hexadecimal no Linux x64; [guia de EVM sem execução](../evm-bytecode.md)                     |
+| Rust binaries               | Embedded cargo-auditable dependency list                                                                                | [Rust binaries](../rust-binaries.md)                                                                                                         |
+| ELF notes                   | PT_NOTE/SHT_NOTE owners, types, GNU build-id and ABI-tag fields                                                         | Built-in static ELF inspection; [ELF notes](../elf-notes.md)                                                                                 |
+| Binary hardening            | PIE, NX, RELRO, CFG and related header flags for ELF, PE and Mach-O                                                     | Built-in static header inspection; [binary hardening](../binary-hardening.md)                                                                |
+| Linux kernel modules        | .modinfo keys, __versions CRCs, this_module presence, and signature trailer                                             | Built-in static ELF inspection; [kernel modules](../kernel-modules.md)                                                                       |
+| Erlang BEAM                 | IFF chunks, atoms, exports, and tables                                                                                  | Built-in static BEAM inspection; [Erlang BEAM](../erlang-beam.md)                                                                            |
+| Apple IPS crashes           | .ips metadata, threads, images, registers and crash classes                                                             | Built-in static JSON inspection; [Apple IPS](../apple-ips.md)                                                                                |
+| Falhas do Linux registradas | Registros note brutos, registradores/sinais de cada thread registrada e candidatos opcionais a mapeamentos              | pwntools fornecido pelo chamador no Linux x64; GDB/pwndbg opcionais; [falhas registradas](../recorded-crashes.md)                            |
+| Instalações desktop         | Ambientes candidatos, arquivos de evidência, componentes e próximos passos                                              | Inspeção limitada de diretórios e cabeçalhos；[Aplicações desktop](../desktop-applications.md)                                               |
+| JavaScript / Electron       | Módulos, importações, source maps, rotas, IPC e relações com complementos nativos                                       | Node.js e npm; [análise de aplicativos](../javascript-application-workflows.md); Linux: procps `ps`                                          |
+| Sites                       | Estrutura da página, scripts, observações de rede e capturas de tela solicitadas                                        | Um navegador da família Chrome; [análise do navegador](../browser-observation.md)                                                            |
+| Capturas de rede salvas     | Requisições, respostas, payloads acessíveis e localizações de origem                                                    | HAR / Fiddler Everywhere SAZ; mitmdump no Linux para capturas no formato nativo do mitmproxy; [guia de capturas](../web-network-captures.md) |
+| Capturas de pacotes         | Endpoints, DNS, TLS SNI, distribuição de protocolos e requisições HTTP                                                  | tshark e capinfos fornecidos pelo chamador; [guia pcap](../pcap-analysis.md)                                                                 |
+| Assemblies .NET             | Metadados, instruções CIL, dependências nativas declaradas e comparações de builds                                      | Inspeção estática; [guia de código gerenciado](../managed-code-analysis.md)                                                                  |
+| PyInstaller                 | CArchive, PYZ, Python bytecode                                                                                          | Static inspection; [Python packaged applications](../python-packaged-applications.md)                                                        |
+| APKs Android                | Declarações do manifesto, classes, métodos descompilados e referências                                                  | JADX sem interface gráfica e um JDK completo no Linux/macOS/Windows x64; [guia de Android](../android-analysis.md)                           |
+| Dispositivos Android        | Dispositivos, pacotes, processos, logs, despejos, capturas de tela e transferências de APK/arquivos                     | adb fornecido pelo chamador (emulador ou aparelho); [guia de ADB](../adb-device-analysis.md)                                                 |
+| Projetos JEB                | Unidades de projeto do motor, hashes de artefatos e pseudocódigo de tipos/métodos                                       | Um cliente JEB iniciado pelo chamador servindo MCP, selecionado com REA_JEB_MCP_URL; [guia de JEB](../jeb-analysis.md)                       |
+| Recursos do Android         | Manifesto decodificado, tabelas de strings, idiomas e fatos de versão                                                   | Lançador do Apktool fornecido pelo chamador; [guia de recursos](../apktool-resource-analysis.md)                                             |
+| Aplicativos Flutter         | Hash de snapshot Dart, hashes de bibliotecas por ABI e procedência de build do motor                                    | Nenhuma (análise estática de APK); [guia Flutter](../flutter-analysis.md)                                                                    |
+| Firmware                    | Regiões, resultados de extração e encaminhamentos à análise nativa                                                      | Binwalk / Unblob no Linux; [guia de firmware](../firmware-analysis.md)                                                                       |
+| Pacotes gravados            | Campos selecionados, valores repetidos, filtros e regras de decodificação                                               | Linux: TShark 4.x + prlimit; [guia de capturas](../packet-captures.md)                                                                       |
+| Sinais lógicos gravados     | Anotações do decodificador, intervalos de amostras e diagnósticos                                                       | Linux: sigrok-cli 0.7.2 + prlimit; [guia de sinais](../signal-recordings.md)                                                                 |
+| Pacotes e recursos          | Inventários de arquivos, digests, plists, estrutura de bundles Apple e recursos extraídos                               | [Guia de artefatos e JavaScript](../javascript-artifact-reconstruction.md), [aplicativos Apple](../apple-application-analysis.md)            |
+| Comportamento de processos  | Saída do terminal, interações, observações de encerramento e do sistema de arquivos, e comparações entre execuções      | Linux/macOS com PTY nativo; [captura de processos](../process-capture.md)                                                                    |
+| Binários Go                 | Versão do compilador embutida, módulos, substituições e configurações de compilação                                     | Inspeção estática integrada ELF/PE/thin Mach-O; Não precisa instalar Go                                                                      |
+| Bancos SQLite               | Tabelas, colunas, índices, views, gatilhos e linhas selecionadas de tabelas comuns                                      | Snapshot local do banco/WAL; Node.js 24.x >=24.15 ou 26+ com limites nativos do SQLite                                                       |
+| Objetos de código GPU       | Alvos CUDA/HIP, parâmetros e recursos de kernels selecionados, texto PTX preservado                                     | Inspeção estática integrada ELF/PE/fatbin/CUBIN/PTX; [GPU](../gpu-code-objects.md)                                                           |
+| Arquivos de modelos         | Metadados GGUF / safetensors, declarações de tensores e totais derivados                                                | Inspeção de cabeçalhos; hash completo opcional; [GGUF / safetensors](../model-artifacts.md)                                                  |
+| Metadados IL2CPP            | Imagens de assemblies Unity global-metadata.dat, nomes de tipos/métodos e intervalos de índices                         | Decodificação estática das versões 24, 27, 29, 31, 39; sem Unity                                                                             |
+| Godot PCK                   | Inventário e extração, cabeçalhos/diretórios originais e identidade do conteúdo selecionado                             | Formatos estáticos 2, 3, 4; sem Godot                                                                                                        |
+| Artefatos WASM              | Validação, seções, formas WAT exatas de importação/exportação e WAT decodificado                                        | Fornecido pelo usuário WABT 1.0.42; `inspect_wasm_artifact`                                                                                  |
+| Assinaturas APK             | Signatários v1/v2/v3/v3.1, impressões digitais de certificados, rotação de chaves e consistência interna dos resumos    | Inspeção estática integrada; `inspect_apk_signature`                                                                                         |
 
 A inspeção estática de JavaScript e .NET lê os arquivos fornecidos sem executar o aplicativo. A captura em execução inicia o alvo selecionado ou interage com ele usando as permissões do seu usuário; cada guia descreve seus efeitos.
 
@@ -199,7 +199,7 @@ Para inspecionar binários nativos offline, o REA também oferece suporte ao GNU
 
 Para binários grandes, aumente o prazo de inicialização com `REA_GHIDRA_STARTUP_TIMEOUT_MS` ou `REA_HOPPER_STARTUP_TIMEOUT_MS`.
 
-Os formatos nativos e os sistemas anfitriões compatíveis variam por provedor. Consulte [configuração do Hopper e Ghidra](../getting-started/installation.md#hopper), o [guia do IDA](../providers/ida-provider.md), [Kuna](../kuna-provider.md) e o [suporte experimental ao Ghidra no Windows](../providers/windows-ghidra-p0.md). O Ghidra também oferece [análise de DOS de 16 bits](../providers/ghidra-dos.md). Para selecionar um provedor, consulte o [guia da CLI](../getting-started/cli.md#choose-a-provider). Verifique a [disponibilidade nas versões](../getting-started/installation.md#released-package-and-main) das funcionalidades adicionadas após a versão mais recente no npm.
+Os formatos nativos e os sistemas anfitriões compatíveis variam por provedor. Consulte [configuração do Hopper e Ghidra](../installation.md#hopper), o [guia do IDA](../ida-provider.md), [Kuna](../kuna-provider.md) e o [suporte experimental ao Ghidra no Windows](../windows-ghidra-p0.md). O Ghidra também oferece [análise de DOS de 16 bits](../ghidra-dos.md). Para selecionar um provedor, consulte o [guia da CLI](../cli.md#choose-a-provider). Verifique a [disponibilidade nas versões](../installation.md#released-package-and-main) das funcionalidades adicionadas após a versão mais recente no npm.
 
 ## Casos de uso
 
@@ -278,28 +278,28 @@ O REA exporta um ambiente executável com um teste básico para verificar se ele
 <details>
 <summary><strong>Quais agentes podem usar o REA?</strong></summary>
 
-Qualquer agente que ofereça suporte a servidores MCP locais. A configuração prepara os [agentes compatíveis](../getting-started/installation.md#supported-agents); outros clientes podem usar o [registro manual do MCP](../getting-started/installation.md#mcp-registry).
+Qualquer agente que ofereça suporte a servidores MCP locais. A configuração prepara os [agentes compatíveis](../installation.md#supported-agents); outros clientes podem usar o [registro manual do MCP](../installation.md#mcp-registry).
 
 </details>
 
 <details>
 <summary><strong>Preciso do Hopper, Ghidra, IDA ou Kuna?</strong></summary>
 
-A análise nativa aprofundada usa um desses motores. A inspeção estática de JavaScript e .NET funciona sem um motor de análise nativa. A configuração pode instalar o Hopper após aprovação; Ghidra, IDA e Kuna usam as instalações existentes. Consulte [configuração dos provedores](../getting-started/installation.md#hopper).
+A análise nativa aprofundada usa um desses motores. A inspeção estática de JavaScript e .NET funciona sem um motor de análise nativa. A configuração pode instalar o Hopper após aprovação; Ghidra, IDA e Kuna usam as instalações existentes. Consulte [configuração dos provedores](../installation.md#hopper).
 
 </details>
 
 <details>
 <summary><strong>Preciso iniciar o Hopper antes?</strong></summary>
 
-O REA inicia o Hopper quando uma operação precisa dele. No macOS, um diálogo na primeira execução pode pedir que você escolha o modo de demonstração ou ative a licença. Consulte [inicialização do Hopper e solução de problemas](../getting-started/installation.md#launcher-paths-and-troubleshooting).
+O REA inicia o Hopper quando uma operação precisa dele. No macOS, um diálogo na primeira execução pode pedir que você escolha o modo de demonstração ou ative a licença. Consulte [inicialização do Hopper e solução de problemas](../installation.md#launcher-paths-and-troubleshooting).
 
 </details>
 
 <details>
 <summary><strong>O que faz a instalação da skill pelo skills.sh?</strong></summary>
 
-A skill fornece instruções de investigação ao seu agente. Use `npx rea-agents setup` para registrar o servidor MCP do REA e instalar as instruções correspondentes, depois reinicie seu agente. Consulte [instalação apenas da skill](../getting-started/installation.md#skill-only-installation).
+A skill fornece instruções de investigação ao seu agente. Use `npx rea-agents setup` para registrar o servidor MCP do REA e instalar as instruções correspondentes, depois reinicie seu agente. Consulte [instalação apenas da skill](../installation.md#skill-only-installation).
 
 </details>
 
@@ -342,12 +342,12 @@ Se você usa um agente, conclua a [atualização da configuração](#atualize-o-
 
 Comece pelos [guias práticos](https://rea.tools/pt-BR/guides/) do site. Para opções exatas, pré-requisitos e contratos dos resultados:
 
-- [Instalação e configuração](../getting-started/installation.md): registro de agentes, configuração de provedores, atualizações e desinstalação.
-- [Prontidão e solução de problemas](../getting-started/installation.md#check-readiness-for-your-task): diagnóstico de um agente ou motor de análise específico.
-- [CLI e Evidence](../getting-started/cli.md): comandos, seleção de provedores, snapshots, importação/exportação e status de saída.
-- [Contratos MCP](../reference/mcp-contracts.md) e [prompts para agentes](../getting-started/mcp-prompts.md): resultados das ferramentas, sessões e investigações guiadas.
-- [Catálogo de ferramentas](../reference/mcp-contracts.md#generated-catalog): inventário de ferramentas, provedores e comandos da CLI gerado durante o build.
-- [Roadmap](../development/roadmap.md): trabalho planejado e acompanhamento das capacidades.
+- [Instalação e configuração](../installation.md): registro de agentes, configuração de provedores, atualizações e desinstalação.
+- [Prontidão e solução de problemas](../installation.md#check-readiness-for-your-task): diagnóstico de um agente ou motor de análise específico.
+- [CLI e Evidence](../cli.md): comandos, seleção de provedores, snapshots, importação/exportação e status de saída.
+- [Contratos MCP](../mcp-contracts.md) e [prompts para agentes](../mcp-prompts.md): resultados das ferramentas, sessões e investigações guiadas.
+- [Catálogo de ferramentas](../mcp-contracts.md#generated-catalog): inventário de ferramentas, provedores e comandos da CLI gerado durante o build.
+- [Roadmap](../roadmap.md): trabalho planejado e acompanhamento das capacidades.
 
 Relate vulnerabilidades conforme [SECURITY.md](../../SECURITY.md).
 
@@ -379,7 +379,7 @@ applicable licenses.
 
 Sua ajuda com o REA é bem-vinda! [Abra uma issue](https://github.com/morluto/rea/issues) para relatar um bug ou sugerir uma funcionalidade, ou [envie um pull request](https://github.com/morluto/rea/pulls) para melhorar o código ou a documentação.
 
-Consulte [CONTRIBUTING.md](../../CONTRIBUTING.md) para configurar o ambiente de desenvolvimento e as verificações, o [guia de testes](../development/testing.md) para os fluxos de verificação e o [mapa da arquitetura](../architecture/architecture.mermaid) para a estrutura do projeto.
+Consulte [CONTRIBUTING.md](../../CONTRIBUTING.md) para configurar o ambiente de desenvolvimento e as verificações, o [guia de testes](../testing.md) para os fluxos de verificação e o [mapa da arquitetura](../architecture.mermaid) para a estrutura do projeto.
 
 ## Licença